| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hflX [H]
Identifier: 83720345
GI number: 83720345
Start: 2517631
End: 2518809
Strand: Direct
Name: hflX [H]
Synonym: BTH_I2240
Alternate gene names: 83720345
Gene position: 2517631-2518809 (Clockwise)
Preceding gene: 83719805
Following gene: 83719290
Centisome position: 66.09
GC content: 64.97
Gene sequence:
>1179_bases TTGACGTCCGATAATTTGATCAACGCAGCGTTAGTCGGCATCGATTTCGGCAAGACCGATTTCGAAGCCAGTCTCGAAGA ACTCAGCCTGCTCGCCTCCAGCGCGGGCGCCCATCCCGCCGTCACGCTGACGGGCCGCCGCTCCAGTCCCGACGCCGCAC TGTTCGTCGGCAGCGGCAAAGCCGAGGAACTGCGGCTTGCCTGTGAAGCGAACGACGTCGAAATCGTCATCTTCAATCAC GCGCTCGCGCCCGCCCAGCAACGCAATCTGGAGCGGGTGCTTAATCGGCGTGTCGTCGATCGCACGAGCCTGATTCTCGA CATCTTCGCGCAACGCGCGCGCAGCCACGAAGGCAAGCTGCAGGTCGAGCTCGCGCAGCTGCAATACCTCGCGACCCGCC TGATTCGGGCCTGGACTCACCTCGAACGGCAAAAGGGCGGTATCGGCCTGCGCGGCCCCGGCGAAACGCAGCTCGAAACC GATCGCCGGCTGATCGGCGAGCGCATCAAGATGCTGAAGTCGCGGCTCGACAAGCTGCGCCGCCAGCATCACACGCAGCG CCGGCAGCGCGCACGCAGCGGCACGATGTCGGTGTCGCTCGTCGGCTACACGAACGCGGGCAAATCGACGCTCTTCAATG CGCTGACGAAAGCGCAGGCGTACGCGGCCGACCAGTTGTTCGCGACGCTCGACACGACGTCGCGACGCGTGTATCTCGGC GACGAGGTCGGGCAGATCGTCGTGTCCGATACCGTCGGCTTCATTCGCGAGCTGCCGCACCAACTCGTCGCGGCGTTTCG CGCGACGCTCGAGGAGACGATCCACGCGGATCTGCTGCTGCACGTCGTCGACGCGTCGAGCGCGGTGCGGCTCGAGCAAA TCGAGCAGGTCAACGATGTGCTGCGCGAAATCGGGGCGGACTCGATCCGTCAAATTCTCGTGTTCAACAAGATCGATGCG GTGCCCGAGCTCGCGGCCCGAGGCGGCGCGGTCGAGCGGGACGAGTATGGTAATATTTCGCGCGTCTTTTTGAGCGCGCG CACGGGCCAGGGTCTGGATTCGCTGCGTGCCGCCATCGCCGAAATCGCTACCGCGGAACATCTTGTCGGCGCCGGGCCGC TTGTCGACGCGCCGGCGCAACCACACGAAGACCACCCGGTTTCCGAACACGGGCGCTGA
Upstream 100 bases:
>100_bases CGCGTCCGGTGAACTTCCACCCGGATGCGGAAGCAGCGTCCTAACCCATTGCCGCGGCTGGCACGCGTCGCCGTCGGCAG CCGATGCCAGCCGCCTTATC
Downstream 100 bases:
>100_bases CGGCTGCGGCCGATCAAGTTGCTCCAATCTGGTGAACAAACACAGGTGAACGACTACAACGAGCGGAGTACCTGGCGGCG AATGCGCGCCTTGCTGTCGA
Product: GTP-binding protein HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTSDNLINAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAALFVGSGKAEELRLACEANDVEIVIFNH ALAPAQQRNLERVLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLATRLIRAWTHLERQKGGIGLRGPGETQLET DRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIRQILVFNKIDA VPELAARGGAVERDEYGNISRVFLSARTGQGLDSLRAAIAEIATAEHLVGAGPLVDAPAQPHEDHPVSEHGR
Sequences:
>Translated_392_residues MTSDNLINAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAALFVGSGKAEELRLACEANDVEIVIFNH ALAPAQQRNLERVLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLATRLIRAWTHLERQKGGIGLRGPGETQLET DRRLIGERIKMLKSRLDKLRRQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIRQILVFNKIDA VPELAARGGAVERDEYGNISRVFLSARTGQGLDSLRAAIAEIATAEHLVGAGPLVDAPAQPHEDHPVSEHGR >Mature_391_residues TSDNLINAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAALFVGSGKAEELRLACEANDVEIVIFNHA LAPAQQRNLERVLNRRVVDRTSLILDIFAQRARSHEGKLQVELAQLQYLATRLIRAWTHLERQKGGIGLRGPGETQLETD RRLIGERIKMLKSRLDKLRRQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLGD EVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDVLREIGADSIRQILVFNKIDAV PELAARGGAVERDEYGNISRVFLSARTGQGLDSLRAAIAEIATAEHLVGAGPLVDAPAQPHEDHPVSEHGR
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=233, Percent_Identity=37.3390557939914, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI310133116, Length=230, Percent_Identity=37.8260869565217, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI310124269, Length=212, Percent_Identity=38.6792452830189, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310124267, Length=212, Percent_Identity=38.6792452830189, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310124171, Length=212, Percent_Identity=38.6792452830189, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310124169, Length=212, Percent_Identity=38.6792452830189, Blast_Score=119, Evalue=6e-27, Organism=Escherichia coli, GI1790615, Length=359, Percent_Identity=56.8245125348189, Blast_Score=383, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17561038, Length=290, Percent_Identity=32.0689655172414, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24650079, Length=317, Percent_Identity=33.1230283911672, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 42922; Mature: 42791
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDNLINAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAALFVGSGK CCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCC AEELRLACEANDVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLILDIFAQRARSHEGKL CCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE QVELAQLQYLATRLIRAWTHLERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDKLR EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LREIGADSIRQILVFNKIDAVPELAARGGAVERDEYGNISRVFLSARTGQGLDSLRAAIA HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHHH EIATAEHLVGAGPLVDAPAQPHEDHPVSEHGR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSDNLINAALVGIDFGKTDFEASLEELSLLASSAGAHPAVTLTGRRSSPDAALFVGSGK CCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCC AEELRLACEANDVEIVIFNHALAPAQQRNLERVLNRRVVDRTSLILDIFAQRARSHEGKL CCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE QVELAQLQYLATRLIRAWTHLERQKGGIGLRGPGETQLETDRRLIGERIKMLKSRLDKLR EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RQHHTQRRQRARSGTMSVSLVGYTNAGKSTLFNALTKAQAYAADQLFATLDTTSRRVYLG HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC DEVGQIVVSDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDASSAVRLEQIEQVNDV CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LREIGADSIRQILVFNKIDAVPELAARGGAVERDEYGNISRVFLSARTGQGLDSLRAAIA HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHHH EIATAEHLVGAGPLVDAPAQPHEDHPVSEHGR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]