| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hrpA [H]
Identifier: 83720275
GI number: 83720275
Start: 2065457
End: 2069599
Strand: Direct
Name: hrpA [H]
Synonym: BTH_I1838
Alternate gene names: 83720275
Gene position: 2065457-2069599 (Clockwise)
Preceding gene: 83719345
Following gene: 83719757
Centisome position: 54.22
GC content: 71.06
Gene sequence:
>4143_bases ATGTCGAATGTACCTAAAAGTCCCGCGCAAAAACATGCGGGCACGCCGGGCGAGGCGCAGCCCGCCGGCGCGCACGCGCC GCGGCCGCCGCGCCCGCCGCGGGCGCCGTCCGGGCAGGCGGGCGCGCCGCGCGCCGCGCGCCGCGACGCCGGCTCCGAGG CCGCGCGCGCGCCGCATGCGCCGCGCGCGCGGACAGCGCCGAATCCCGTTCCGCCGATCACGTTTCCCGAAAGCCTGCCC GTGTCGGGCAAGCGCGACGAGATCGCGCGCGCGATCGCCGCTCACCAGGTCGTGATCGTCTGCGGCGAGACGGGCTCGGG CAAGACCACCCAGTTGCCGAAGATCTGCCTCGCGCTCGGCCGCGGCGTCGGCGCGGGCGGCGCGGGGCTGATCGGCCACA CGCAGCCGAGGCGGCTCGCGGCGTCGTCGACGGGCCGCCGGATCGCCGAGGAGCTCGGCACGCCGTTCGGCGAAGTGGTG GGCTACAAGGTGCGCTTCACCGACAACCTCGCGCCGGGCGCGTCGGTCAAGCTGATGACGGACGGCATCCTGCTCGCCGA GTCGCAGACCGATCCGCTGCTCAAGGCGTACGACACCCTCATCATCGACGAGGCGCACGAGCGCAGCCTGAACATCGATT TTCTGCTCGGCTACCTGAAGCAGATCCTGCCGAGGCGGCCGGACCTGAAGCTGATCGTCACGTCGGCGACGATCGACGCG GACCGTTTCGCGCGCCATTTCGGCAGCGACGAGCGGCCCGCGCCGGTGATCGAGGTGAGCGGGCGGCTCTATCCGGTGGA AGTCCGCTACCGGCCGATCGCCGACGACCGGCCGGCCGCCGTCCGGCACGCGGAAGGCGCGGCGTCCGGGCGCGACCGCG CGAAGAGCGCGCGCGAGGCCGAGCGCGACCTGATGGACGGCATCGTCGACGCGGTCGACGAGCTGTGCCGCGAGGGCCCG GGCGACGTGCTCGTGTTCCTGCCCGGCGAGCGCGAGATCCGCGACGCCGCCGAGTCGCTGCGCAAGCACCATCCGCCGCA CACCGAGATCCTGCCGCTGTTCGCGCGGCTGTCGGCGGCCGAGCAGGAGCGCGTGTTCAAGGCGTCGAACGCGCGGCGGA TCGTGCTCGCGACGAACGTCGCCGAGACGTCGCTCACGGTGCCGGGCATCCGCTACGTCGTCGATACCGGGCTTGCGCGC GTGAAGCGCTATTCGTACCGGAACAAGGTCGAGCAGTTGCAGATCGAGTCGATCTCGCAGGCGGCCGCGAACCAGCGCGC GGGCCGCTGCGGCCGCGTCGCCGACGGCATCTGCATCCGTCTCTACGAGGAAAGCGATTTCGCCGGCCGCGCGCGCTTCA CCGATCCGGAAATCCTGCGCTCGTCGCTCGCATCGGTGATCCTGCGGATGAAGTCGCTGCATCTGTCGGCGATCGAATCG TTTCCGTTCATCGAGCCGCCGCCCGGCCGCGCGATCGCGGACGGCTATCAACTGCTCAACGAGCTCGGCGCGGTCGACGA CGACAACGCGCTCACGCCGCTCGGCCGCGAGCTCGCGCGGTTGCCGCTCGATCCGCGCGTCGGCCGGATGATCCTCGCCG CGCGCGACCAGCAGGCGTTGCGCGAAGTGCTCGTGATCGCGAGCGCGCTGTCCGTGCAGGACCCGCGCGATCGCCCGATC GACGCGCAGGAGCAGGCCGACCAGGCGCACCGGCGCTTCGCCGACGAGCGCTCCGAGTTCCTCCAGTGGCTGAGGATCTG GGCGTGGTTCGAGGAGGCGGTCGCGCACAAGAAGTCGAACCGGCAACTCGTCGACGCGTGCCGGCAGCATTTCCTGTCGC ACCTGCGGCTGCGCGAATGGCGCGACGTCCACTCGCAGCTCCTGACCGTCGTGCGCGAGCACGGCTGGCGCCTGAACGAG GCCGACGCGACGTTCGAGCAGATCCATCTGTCGCTGTTGACGGGGCTGCTCGGCAACATCGGCTTCAAGGCCGAGGACGA GCCGCACTATCTCGGCGCGCGCGGGATCAAGTTCCATCTGTGGCCGGGCTCCGCGCTCGTGAAGAAGGCGGGGCGCTGGG TGATGGCGGCCGAGCTCGTCGAGACGAGCCGCCTCTATGCGCGCTGCATCGCGAAGATCGAGCCGGAATGGATCGAGCGC ATCGGCGCGCACCTGTTGAAGAAATCGCTGTCCGAGCCGCACTGGGAGAAGCGTCCCGCGCAGGTCACCGCGTTCGAGCG CGCGACGCTGTACGGGCTCACCGTCTATCACCGGCGGCGCGTCGCGTTCGGCCGGCAGGACCCGGCGCGCGCGCGGGAGC TGTTCATCCGCGGCGCGCTCGTCGACGGCGAATTCGACACGAAGCTCGCGTTCTTCGCGCACAACCGCAAGCTGCTCGCC GACATCGAGCAGCTCGAGCACAAGTCGCGCCGGCAGGACGTGCTCGTCGACGACGAGCTGATTCACGCGTTCTACGATCA GGCGATTCCGTCCGGCATCCACACGGGCGCCGCGTTCGAGCGCTGGTACCGCGACGAGGTGAAAAAGAGCGGGCAGCCGG AAGACAAGCTGCGCCTGCTGTATCTGTCGCGCGACGATCTGATGCGCCACGAGGCGGCGGGCGTGACGACCGATCTGTTT CCGAAGCGCGCGACGATGGCGGGCGTCGAGATGGCGCTCACGTACCACTTCGAGCCCGGCTCGCCGCGCGACGGCGTGAC GCTCGCGGTGCCGCTCTTCGCGCTGAACCAGGTCGACGCGCGCCGCGCCGAGTGGCTCGTGCCCGGGATGCTGAAGGAGA AGGCGCACCTGCTGCTGAAGTCGCTGCCGCAGAAGCTGCGCCGCCATTGCGTGCCGCTGCCAGAGTACGCGGCGGGCTTC GTCGAGCGCGCCGGGCGCGAGCGCTTCGGCGCGGGCGGCCTCGTCGACGCGCTGATCGCCGACGTCCGCGAGCGGACGCA GGTCGCGACGAAGACGTCCGACTTCAAGCTCGAGACGCTGCCCGCGCACCTGTTCATGAACTTCAAGGTGATCGACGAGC ACGGCCGGCAGCTCGCGATGGGGCGCAATCTCGCGCAGTTGCGCGCGGAGTTGGGCGCGCAGGCGCAGCAGCACTTTCAG AAGATCGCCGCCGCGGCAACGCTCGCGCCGGCGGGCGCGCCTTCCGGCGCGGCCGCCGCCGAGGCGCCCGCGGGTGGCGC GCGGCCGCGAGGCGCGCAAGGCGGCGGGGCGACGCCCGCCGTCGCGCCGTCGGCGGCGCAAGCGGGCGCGGCCGCCGCCG GCGCGACCGCGCTTTATGAGAACCTGACGACGTGGAACTTCGGCAAGCTGCCGGAACTCCTCGAGATCCGCCGGCGCGGC GAGACGCTGTTCGGCTACCCGGCGCTCGTCGACCGCGGCACGCACTGCGACGTCGAGGTGTTCGACTCGCCCGACGAGGC GGCGCGAATCCACCGCGCGGGCCTGCGGCGCCTGTTCGCGTTGCAGCTGAAGGAGCCGATCAAGTACCTGGAGAAGAACC TGCCGGGGCTGCGCGAGATGGCGATGCAGTACATGTCGCTCGGCACGCAGGACGAACTGCGCGACCAGTTGATCGCGACC GCGCTCGACCGCGCGTGCCTGCAGGACCCGCTGCCCGCCGACGACGCGAGTTTTCACGCGCGCCGCGACGAGGGCAGGAG CCGGCTGAACCTGCTCGCGCAGGAGATGGCGCGGCTCGTCGGGCAGATCCTCGCCGAGTACGCGGGGCTCGCGAAGAAGC TCGCGCAGGCGAAGCCGTTCCCGGCCGCGCACGCGGACCTGCAGGGCCAGCTCGCCGCGCTCGTCGGCAAGCGCTTCGTC ATCGACACGCCTTACGCGCAGCTTGCGCATTTCCCGCGCTACCTGAAGGGCATCGCGCTGCGAATCGACAAGCTGAAGGC CGATCCCGCCCGCGACGCGCGGCAGGCGGCCGAGCTGCAGCCGCTCGCGCAGCATTATCAGCGCTCGATTGTGCAGCGCG GCGGCGTCGCGGATGCGCGGCTCGCCGAGTTCCGGTGGCTGCTCGAGGAACTGCGGATCTCGCTTTTCGCGCAGGAACTG CGCACGCCGATGCCGGTGTCGGTCAAGCGGCTCTACAAAGTGTGGGAGTCGATGCAGCGCTGA
Upstream 100 bases:
>100_bases TGATGGACGGCTTCGTCGACGGACGGCTGGGGCGCGGCACCCGATTGGGCGGCGGGGAGGTCGGTTTGGGAATTCATGGG CGGGATTATAATGCGCCCCC
Downstream 100 bases:
>100_bases GCGCGGTTCAAAGTATGCGGGTTCACACTCGGGCGCGGGACGTCAACCGGCGGCGCTCTCGCGCGTTTTACAATCACGCC AGTCCCACGACGTGAGTCTT
Product: ATP-dependent helicase HrpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1380; Mature: 1379
Protein sequence:
>1380_residues MSNVPKSPAQKHAGTPGEAQPAGAHAPRPPRPPRAPSGQAGAPRAARRDAGSEAARAPHAPRARTAPNPVPPITFPESLP VSGKRDEIARAIAAHQVVIVCGETGSGKTTQLPKICLALGRGVGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVV GYKVRFTDNLAPGASVKLMTDGILLAESQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLKQILPRRPDLKLIVTSATIDA DRFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGAASGRDRAKSAREAERDLMDGIVDAVDELCREGP GDVLVFLPGEREIRDAAESLRKHHPPHTEILPLFARLSAAEQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLAR VKRYSYRNKVEQLQIESISQAAANQRAGRCGRVADGICIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES FPFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQALREVLVIASALSVQDPRDRPI DAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSNRQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNE ADATFEQIHLSLLTGLLGNIGFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER IGAHLLKKSLSEPHWEKRPAQVTAFERATLYGLTVYHRRRVAFGRQDPARARELFIRGALVDGEFDTKLAFFAHNRKLLA DIEQLEHKSRRQDVLVDDELIHAFYDQAIPSGIHTGAAFERWYRDEVKKSGQPEDKLRLLYLSRDDLMRHEAAGVTTDLF PKRATMAGVEMALTYHFEPGSPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF VERAGRERFGAGGLVDALIADVRERTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAMGRNLAQLRAELGAQAQQHFQ KIAAAATLAPAGAPSGAAAAEAPAGGARPRGAQGGGATPAVAPSAAQAGAAAAGATALYENLTTWNFGKLPELLEIRRRG ETLFGYPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIAT ALDRACLQDPLPADDASFHARRDEGRSRLNLLAQEMARLVGQILAEYAGLAKKLAQAKPFPAAHADLQGQLAALVGKRFV IDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQHYQRSIVQRGGVADARLAEFRWLLEELRISLFAQEL RTPMPVSVKRLYKVWESMQR
Sequences:
>Translated_1380_residues MSNVPKSPAQKHAGTPGEAQPAGAHAPRPPRPPRAPSGQAGAPRAARRDAGSEAARAPHAPRARTAPNPVPPITFPESLP VSGKRDEIARAIAAHQVVIVCGETGSGKTTQLPKICLALGRGVGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVV GYKVRFTDNLAPGASVKLMTDGILLAESQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLKQILPRRPDLKLIVTSATIDA DRFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGAASGRDRAKSAREAERDLMDGIVDAVDELCREGP GDVLVFLPGEREIRDAAESLRKHHPPHTEILPLFARLSAAEQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLAR VKRYSYRNKVEQLQIESISQAAANQRAGRCGRVADGICIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES FPFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQALREVLVIASALSVQDPRDRPI DAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSNRQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNE ADATFEQIHLSLLTGLLGNIGFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER IGAHLLKKSLSEPHWEKRPAQVTAFERATLYGLTVYHRRRVAFGRQDPARARELFIRGALVDGEFDTKLAFFAHNRKLLA DIEQLEHKSRRQDVLVDDELIHAFYDQAIPSGIHTGAAFERWYRDEVKKSGQPEDKLRLLYLSRDDLMRHEAAGVTTDLF PKRATMAGVEMALTYHFEPGSPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF VERAGRERFGAGGLVDALIADVRERTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAMGRNLAQLRAELGAQAQQHFQ KIAAAATLAPAGAPSGAAAAEAPAGGARPRGAQGGGATPAVAPSAAQAGAAAAGATALYENLTTWNFGKLPELLEIRRRG ETLFGYPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIAT ALDRACLQDPLPADDASFHARRDEGRSRLNLLAQEMARLVGQILAEYAGLAKKLAQAKPFPAAHADLQGQLAALVGKRFV IDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQHYQRSIVQRGGVADARLAEFRWLLEELRISLFAQEL RTPMPVSVKRLYKVWESMQR >Mature_1379_residues SNVPKSPAQKHAGTPGEAQPAGAHAPRPPRPPRAPSGQAGAPRAARRDAGSEAARAPHAPRARTAPNPVPPITFPESLPV SGKRDEIARAIAAHQVVIVCGETGSGKTTQLPKICLALGRGVGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVG YKVRFTDNLAPGASVKLMTDGILLAESQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLKQILPRRPDLKLIVTSATIDAD RFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGAASGRDRAKSAREAERDLMDGIVDAVDELCREGPG DVLVFLPGEREIRDAAESLRKHHPPHTEILPLFARLSAAEQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARV KRYSYRNKVEQLQIESISQAAANQRAGRCGRVADGICIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIESF PFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQALREVLVIASALSVQDPRDRPID AQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSNRQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEA DATFEQIHLSLLTGLLGNIGFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIERI GAHLLKKSLSEPHWEKRPAQVTAFERATLYGLTVYHRRRVAFGRQDPARARELFIRGALVDGEFDTKLAFFAHNRKLLAD IEQLEHKSRRQDVLVDDELIHAFYDQAIPSGIHTGAAFERWYRDEVKKSGQPEDKLRLLYLSRDDLMRHEAAGVTTDLFP KRATMAGVEMALTYHFEPGSPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGFV ERAGRERFGAGGLVDALIADVRERTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAMGRNLAQLRAELGAQAQQHFQK IAAAATLAPAGAPSGAAAAEAPAGGARPRGAQGGGATPAVAPSAAQAGAAAAGATALYENLTTWNFGKLPELLEIRRRGE TLFGYPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATA LDRACLQDPLPADDASFHARRDEGRSRLNLLAQEMARLVGQILAEYAGLAKKLAQAKPFPAAHADLQGQLAALVGKRFVI DTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQHYQRSIVQRGGVADARLAEFRWLLEELRISLFAQELR TPMPVSVKRLYKVWESMQR
Specific function: Not yet known [H]
COG id: COG1643
COG function: function code L; HrpA-like helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI68509926, Length=728, Percent_Identity=34.478021978022, Blast_Score=405, Evalue=1e-112, Organism=Homo sapiens, GI4826690, Length=664, Percent_Identity=35.5421686746988, Blast_Score=404, Evalue=1e-112, Organism=Homo sapiens, GI17999539, Length=662, Percent_Identity=34.8942598187311, Blast_Score=382, Evalue=1e-105, Organism=Homo sapiens, GI20544129, Length=681, Percent_Identity=34.3612334801762, Blast_Score=375, Evalue=1e-103, Organism=Homo sapiens, GI256000749, Length=683, Percent_Identity=34.9926793557833, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI255982614, Length=683, Percent_Identity=34.9926793557833, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI38158022, Length=564, Percent_Identity=36.7021276595745, Blast_Score=350, Evalue=7e-96, Organism=Homo sapiens, GI299829255, Length=628, Percent_Identity=34.3949044585987, Blast_Score=346, Evalue=9e-95, Organism=Homo sapiens, GI20336302, Length=671, Percent_Identity=31.5946348733234, Blast_Score=338, Evalue=2e-92, Organism=Homo sapiens, GI261878478, Length=674, Percent_Identity=31.8991097922849, Blast_Score=317, Evalue=4e-86, Organism=Homo sapiens, GI167830433, Length=609, Percent_Identity=32.512315270936, Blast_Score=279, Evalue=1e-74, Organism=Homo sapiens, GI20336294, Length=527, Percent_Identity=34.3453510436433, Blast_Score=275, Evalue=2e-73, Organism=Homo sapiens, GI20336290, Length=527, Percent_Identity=34.3453510436433, Blast_Score=275, Evalue=2e-73, Organism=Homo sapiens, GI39777586, Length=640, Percent_Identity=31.09375, Blast_Score=273, Evalue=9e-73, Organism=Homo sapiens, GI167830436, Length=606, Percent_Identity=32.1782178217822, Blast_Score=272, Evalue=2e-72, Organism=Homo sapiens, GI100913206, Length=600, Percent_Identity=31.3333333333333, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI261878481, Length=578, Percent_Identity=30.1038062283737, Blast_Score=242, Evalue=2e-63, Organism=Homo sapiens, GI166851804, Length=515, Percent_Identity=31.8446601941748, Blast_Score=210, Evalue=9e-54, Organism=Homo sapiens, GI20336300, Length=667, Percent_Identity=26.0869565217391, Blast_Score=207, Evalue=6e-53, Organism=Homo sapiens, GI67782362, Length=432, Percent_Identity=30.3240740740741, Blast_Score=171, Evalue=7e-42, Organism=Homo sapiens, GI163914394, Length=509, Percent_Identity=30.4518664047151, Blast_Score=160, Evalue=7e-39, Organism=Homo sapiens, GI29029601, Length=273, Percent_Identity=36.2637362637363, Blast_Score=156, Evalue=1e-37, Organism=Homo sapiens, GI269847874, Length=541, Percent_Identity=26.4325323475046, Blast_Score=155, Evalue=2e-37, Organism=Escherichia coli, GI145693127, Length=1320, Percent_Identity=45.8333333333333, Blast_Score=1104, Evalue=0.0, Organism=Escherichia coli, GI87081693, Length=462, Percent_Identity=33.982683982684, Blast_Score=217, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17535281, Length=662, Percent_Identity=34.2900302114804, Blast_Score=383, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17554326, Length=659, Percent_Identity=35.8118361153263, Blast_Score=377, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17556386, Length=738, Percent_Identity=33.739837398374, Blast_Score=371, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17531507, Length=667, Percent_Identity=34.3328335832084, Blast_Score=368, Evalue=1e-101, Organism=Caenorhabditis elegans, GI25144243, Length=669, Percent_Identity=32.5859491778774, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565154, Length=663, Percent_Identity=32.579185520362, Blast_Score=357, Evalue=4e-98, Organism=Caenorhabditis elegans, GI71990212, Length=745, Percent_Identity=28.8590604026846, Blast_Score=305, Evalue=1e-82, Organism=Caenorhabditis elegans, GI71996313, Length=490, Percent_Identity=35.7142857142857, Blast_Score=263, Evalue=3e-70, Organism=Caenorhabditis elegans, GI86562256, Length=706, Percent_Identity=28.4702549575071, Blast_Score=226, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=28.0653950953678, Blast_Score=148, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17552054, Length=275, Percent_Identity=33.4545454545455, Blast_Score=145, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320850, Length=672, Percent_Identity=34.077380952381, Blast_Score=401, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6321318, Length=678, Percent_Identity=34.6607669616519, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6322939, Length=674, Percent_Identity=35.0148367952522, Blast_Score=349, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6322772, Length=675, Percent_Identity=32, Blast_Score=309, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6324338, Length=673, Percent_Identity=30.7578008915305, Blast_Score=301, Evalue=5e-82, Organism=Saccharomyces cerevisiae, GI6323451, Length=485, Percent_Identity=29.8969072164948, Blast_Score=207, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6323776, Length=212, Percent_Identity=42.9245283018868, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI20129977, Length=653, Percent_Identity=36.7534456355283, Blast_Score=404, Evalue=1e-112, Organism=Drosophila melanogaster, GI19921728, Length=662, Percent_Identity=34.2900302114804, Blast_Score=394, Evalue=1e-109, Organism=Drosophila melanogaster, GI18859729, Length=661, Percent_Identity=35.249621785174, Blast_Score=371, Evalue=1e-102, Organism=Drosophila melanogaster, GI19920696, Length=667, Percent_Identity=33.7331334332834, Blast_Score=364, Evalue=1e-100, Organism=Drosophila melanogaster, GI19921526, Length=681, Percent_Identity=33.920704845815, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI45550174, Length=663, Percent_Identity=32.7300150829563, Blast_Score=349, Evalue=9e-96, Organism=Drosophila melanogaster, GI24643238, Length=568, Percent_Identity=31.8661971830986, Blast_Score=288, Evalue=2e-77, Organism=Drosophila melanogaster, GI24585491, Length=605, Percent_Identity=31.404958677686, Blast_Score=286, Evalue=8e-77, Organism=Drosophila melanogaster, GI24585920, Length=502, Percent_Identity=33.8645418326693, Blast_Score=250, Evalue=5e-66, Organism=Drosophila melanogaster, GI17136342, Length=502, Percent_Identity=33.8645418326693, Blast_Score=249, Evalue=8e-66, Organism=Drosophila melanogaster, GI24642763, Length=638, Percent_Identity=30.8777429467085, Blast_Score=248, Evalue=2e-65, Organism=Drosophila melanogaster, GI24641139, Length=632, Percent_Identity=31.0126582278481, Blast_Score=238, Evalue=2e-62, Organism=Drosophila melanogaster, GI24641942, Length=502, Percent_Identity=30.0796812749004, Blast_Score=223, Evalue=6e-58, Organism=Drosophila melanogaster, GI17136508, Length=509, Percent_Identity=32.4165029469548, Blast_Score=204, Evalue=3e-52, Organism=Drosophila melanogaster, GI17136242, Length=273, Percent_Identity=35.1648351648352, Blast_Score=155, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR011709 - InterPro: IPR007502 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR010222 [H]
Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 152522; Mature: 152391
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVPKSPAQKHAGTPGEAQPAGAHAPRPPRPPRAPSGQAGAPRAARRDAGSEAARAPHA CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCC PRARTAPNPVPPITFPESLPVSGKRDEIARAIAAHQVVIVCGETGSGKTTQLPKICLALG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHC RGVGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCCCCCEEEEE DGILLAESQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLKQILPRRPDLKLIVTSATIDA CCEEEECCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCH DRFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGAASGRDRAKSAREA HHHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHH ERDLMDGIVDAVDELCREGPGDVLVFLPGEREIRDAAESLRKHHPPHTEILPLFARLSAA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQIESISQ HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAANQRAGRCGRVADGICIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC FPFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQAL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH REVLVIASALSVQDPRDRPIDAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSN HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEADATFEQIHLSLLTGLLGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER CCCCCCCCCEECCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH IGAHLLKKSLSEPHWEKRPAQVTAFERATLYGLTVYHRRRVAFGRQDPARARELFIRGAL HHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE VDGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIHAFYDQAIPSGIHTGAAFE ECCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHH RWYRDEVKKSGQPEDKLRLLYLSRDDLMRHEAAGVTTDLFPKRATMAGVEMALTYHFEPG HHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHCCCCHHHCCCHHHHHCEEEEEEEEECCC SPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF CCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VERAGRERFGAGGLVDALIADVRERTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHEECHHHHEEEEEEHHCCHHHHH GRNLAQLRAELGAQAQQHFQKIAAAATLAPAGAPSGAAAAEAPAGGARPRGAQGGGATPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAPSAAQAGAAAAGATALYENLTTWNFGKLPELLEIRRRGETLFGYPALVDRGTHCDVEV CCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCHHHHCCCCCCCEEE FDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIAT ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH ALDRACLQDPLPADDASFHARRDEGRSRLNLLAQEMARLVGQILAEYAGLAKKLAQAKPF HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAAHADLQGQLAALVGKRFVIDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQ CCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH PLAQHYQRSIVQRGGVADARLAEFRWLLEELRISLFAQELRTPMPVSVKRLYKVWESMQR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SNVPKSPAQKHAGTPGEAQPAGAHAPRPPRPPRAPSGQAGAPRAARRDAGSEAARAPHA CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCC PRARTAPNPVPPITFPESLPVSGKRDEIARAIAAHQVVIVCGETGSGKTTQLPKICLALG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHC RGVGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCCCCCEEEEE DGILLAESQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLKQILPRRPDLKLIVTSATIDA CCEEEECCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCH DRFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGAASGRDRAKSAREA HHHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHH ERDLMDGIVDAVDELCREGPGDVLVFLPGEREIRDAAESLRKHHPPHTEILPLFARLSAA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQIESISQ HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAANQRAGRCGRVADGICIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC FPFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQAL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH REVLVIASALSVQDPRDRPIDAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSN HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEADATFEQIHLSLLTGLLGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER CCCCCCCCCEECCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH IGAHLLKKSLSEPHWEKRPAQVTAFERATLYGLTVYHRRRVAFGRQDPARARELFIRGAL HHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE VDGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIHAFYDQAIPSGIHTGAAFE ECCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHH RWYRDEVKKSGQPEDKLRLLYLSRDDLMRHEAAGVTTDLFPKRATMAGVEMALTYHFEPG HHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHCCCCHHHCCCHHHHHCEEEEEEEEECCC SPRDGVTLAVPLFALNQVDARRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPEYAAGF CCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VERAGRERFGAGGLVDALIADVRERTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHEECHHHHEEEEEEHHCCHHHHH GRNLAQLRAELGAQAQQHFQKIAAAATLAPAGAPSGAAAAEAPAGGARPRGAQGGGATPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAPSAAQAGAAAAGATALYENLTTWNFGKLPELLEIRRRGETLFGYPALVDRGTHCDVEV CCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCHHHHCCCCCCCEEE FDSPDEAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIAT ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH ALDRACLQDPLPADDASFHARRDEGRSRLNLLAQEMARLVGQILAEYAGLAKKLAQAKPF HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAAHADLQGQLAALVGKRFVIDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQ CCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH PLAQHYQRSIVQRGGVADARLAEFRWLLEELRISLFAQELRTPMPVSVKRLYKVWESMQR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7899078; 9097039; 9278503 [H]