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The map label for this gene is ydhJ [H]

Identifier: 83720158

GI number: 83720158

Start: 2991783

End: 2992658

Strand: Direct

Name: ydhJ [H]

Synonym: BTH_I2628

Alternate gene names: 83720158

Gene position: 2991783-2992658 (Clockwise)

Preceding gene: 83719960

Following gene: 83718758

Centisome position: 78.54

GC content: 67.12

Gene sequence:

>876_bases
TTGCGAAAACTTTTCGGCTTCGTCGCGACAGCCGCCATCCTCATCGTCGCGATCCTGATCGGGCGCACGCTGTGGGTCCA
TTACATGGACGAGCCGTGGACCCGCGACGGCCGCGTGCGCGCGGAGATCGTCAACGTCGCGCCCGACGTGTCGGGCGCGG
TGGTCGACTTGCCGGTGCGCGACAACCAGTTCGTGAAAAAGGGCGACCTGATCATGCAGATCGACCCGTCGCATTACCAG
ATCGCGGTCGAGCAGGCGCAGGCGGCCGTCGCCGCCCGCCGTGCGGAGCTGCAGATGCGCCGCGCCGACGCCGCGCGCCG
CGCGGATCTCGATGCGCTCGTCGTATCGAAGGAAAGCCGCGAGAACTCGATGCAGACCGCATCGAGCGCCGACGCGCAGT
ACCAGCAGGCGCTCGCCGCGCTCGACGCCGCGAAGCTCAATCTCGAGCGCACGCGCGTAGTCGCGCCCGTCGACGGCTAC
GTGACGAACCTGCAGGTATTCAAGGGCGACTACGCGACGGCCGGCCAGGCGAAGCTCGCGATCGTCGACAGCCATTCGTT
CTGGGTCTACGGCTACTTCGAGGAAACGAAGCTGCCGCGCGTGAAGATCGGCGCGAAGGCCGAGATGCGGCTGATGAGCG
GCGGCGTGCTCAAAGGCCACGTCGAGAGCATCTCGCGCGGCATCTACGACCGAGACAATCCGCAGAGCCGCGACCTCGTC
GCCGACGTGAACCCGACGTTCAACTGGGTGAGGCTCGCGCAGCGCGTGCCGGTGCGCATCCATATCGACGAGGTGCCGAA
GGATCTCGTGCTGTCGGCCGGCACGACCTGCACGGTGATCGTCGAGCCGGACGACGGCGGCAAGCGCAAGTCGTAG

Upstream 100 bases:

>100_bases
GTCGTCTGGCACCCGTCACTGTTCCGGGCAAGCCTTCTCGTGTGCATTTGCGGCGGGCTGAGCCTCGCCGTCTACCGTTG
ATATGAATCGAACCATGCTC

Downstream 100 bases:

>100_bases
CGCGGCGCGCGGAACAAGCGGCGGTTCGCCGCGCGGATACGGCGCGGCGCGCAGCACGCGGCCCGCCGCGCACGACGCAA
AAACGGCCGGCATGCGGTGG

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRKLFGFVATAAILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVDLPVRDNQFVKKGDLIMQIDPSHYQ
IAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESRENSMQTASSADAQYQQALAALDAAKLNLERTRVVAPVDGY
VTNLQVFKGDYATAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRDLV
ADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDDGGKRKS

Sequences:

>Translated_291_residues
MRKLFGFVATAAILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVDLPVRDNQFVKKGDLIMQIDPSHYQ
IAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESRENSMQTASSADAQYQQALAALDAAKLNLERTRVVAPVDGY
VTNLQVFKGDYATAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRDLV
ADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDDGGKRKS
>Mature_291_residues
MRKLFGFVATAAILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVDLPVRDNQFVKKGDLIMQIDPSHYQ
IAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESRENSMQTASSADAQYQQALAALDAAKLNLERTRVVAPVDGY
VTNLQVFKGDYATAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRDLV
ADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDDGGKRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=280, Percent_Identity=44.6428571428571, Blast_Score=243, Evalue=9e-66,
Organism=Escherichia coli, GI1789637, Length=282, Percent_Identity=41.4893617021277, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1790519, Length=307, Percent_Identity=29.9674267100977, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1788711, Length=335, Percent_Identity=26.865671641791, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789041, Length=300, Percent_Identity=25.3333333333333, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082036, Length=136, Percent_Identity=33.8235294117647, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081796, Length=185, Percent_Identity=29.1891891891892, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32126; Mature: 32126

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLFGFVATAAILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVDLPVR
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEECC
DNQFVKKGDLIMQIDPSHYQIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESR
CCCEEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH
ENSMQTASSADAQYQQALAALDAAKLNLERTRVVAPVDGYVTNLQVFKGDYATAGQAKLA
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEEE
IVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRDLV
EEECCCEEEEEEECCCCCCEEEECCCEEEEEECCCCEEHHHHHHHCCCCCCCCCCCCCEE
ADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDDGGKRKS
EECCCCHHHHHHHHHCCEEEEECCCCHHHEEECCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRKLFGFVATAAILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVDLPVR
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEECC
DNQFVKKGDLIMQIDPSHYQIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESR
CCCEEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH
ENSMQTASSADAQYQQALAALDAAKLNLERTRVVAPVDGYVTNLQVFKGDYATAGQAKLA
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEEE
IVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRDLV
EEECCCEEEEEEECCCCCCEEEECCCEEEEEECCCCEEHHHHHHHCCCCCCCCCCCCCEE
ADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDDGGKRKS
EECCCCHHHHHHHHHCCEEEEECCCCHHHEEECCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]