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The map label for this gene is glpD [H]

Identifier: 83720139

GI number: 83720139

Start: 683989

End: 685521

Strand: Reverse

Name: glpD [H]

Synonym: BTH_I0600

Alternate gene names: 83720139

Gene position: 685521-683989 (Counterclockwise)

Preceding gene: 83718761

Following gene: 83719921

Centisome position: 18.0

GC content: 70.25

Gene sequence:

>1533_bases
GTGACTCAACAGAATCGTTACGATCTGCTCGTCGTCGGCGGCGGGATCAACGGCGCGGGCATCGCGCGCGACGCGGCCGG
CCGGGGCCTGTCGGTGCTCCTTTGCGAACAGGACGACCTCGCGTCGCACACCTCCTCTTCGAGCACGAAGCTGATCCACG
GCGGTCTGCGCTACCTCGAATACAAGGAATTCGGGCTCGTGCGCAAGGCATTGCAGGAGCGCGAGACGCTCCTGCGCGCG
GCGCCGCACATCATCTGGCCGCTGCGCTTCGTGATGCCGCACATGCCGAACCTGCGCCCCGCGTGGCTCATCCGGATCGG
CCTCTTCCTGTACGACCATCTCGCGAAGCGCGAGCTGCTGCCCGGCTCGCGCGGCATCGACATGCGCCGCCACCCGGCGG
GCGCGCCGCTCGTCGATTCGATCAAGCGCGGCTTCGTCTACTCGGACGGCTGGGTCGACGACGCGCGGCTCGTCGTGCTG
AACGCGCTCGACGCGCAGGAGCGCGGCGCGCGCATCCTCACGCGCACGAAGCTCGTGTCGGCCGAGCGCCGCGACGGGCA
ATGGCATGCGCGGCTGCAACGCGCCGACGGCTCGACGCTCGACGTGTGCGCCCGCGCGGTCGCGAACGCGGCGGGCCCGT
GGGTCGGCGACGTGCTGCACGGCGCGCTCGGCCGCGGCGCACAGCACAGCGTGCGGCTCGTGAAGGGCAGCCACATCGTC
ACGCGGCGCCTGTTCGATCACGACCACGCATACATCTTCCAGAATCCGGACAAGCGGATCATCTTCGCGATTCCATACGA
ACGCGACTTCACGCTGATCGGCACGACCGACGTCGAATATCGCGACGATCCGTCGCGCGTCGCGATCGACCGCGACGAAA
CGCGCTACCTGTGCGAGTCGATCAATCGCTATTTCAAGCGTAAGATCTCGCCCGCCGACGTGTGCTGGACCTATTCCGGC
GTGCGCCCGCTCCTCGAGGACGAGAACGCGGACAACCCATCCGCCGTCACGCGCGACTATCGCCTCGAGCTCGACGGCGG
CGACGGCGCGCCGCTCTTGTCGGTGTTCGGCGGCAAGATCACGACGTTTCGCAAGCTCGCCGAAGAGGCGACCGACATGC
TGGGCGGCGCGCTCGGCGCGTCGCGCGGCGCATGGACGGCGGGCGTGCCCCTGCCCGGCGGCGACATCGCCGATGCGCGT
TTCGCGCCGTTCGCCGAAGCGTTCGCGAAACGTCACCCGTGGCTGCCCGCCGCGCTCGCGCGCCGCTATGCGCGCGCGTA
CGGCACGCGCGCCGAGCGCGTGATCGGCGGTGCGAAGTCGCTCGCCGAGCTCGGCGCCGAACTCGCGCCCGGCCTCTACG
AAGCGGAATTGCGTTATCTGCGCGACGCCGAATGGGCGAGCTGCGCGGACGACGTACTGTGGCGGCGCTCGAAGCTCGGC
CTGCATGTCGCGCCGGGCACGCTCGACGCCGTGACGGCCGCGCTCGACGCCTGGTTCGGCGCCGCGCGCGAGGCGGCGAG
CGCCGCACACTGA

Upstream 100 bases:

>100_bases
TCAAAAGCGAACTTTACTTTTTCGATTATGTTCGTTAAATTTCGAATGCGAACATTTCAGGTTCGCTCATTTTCTGTTAT
ACGAACGTTAGGATCAGCGG

Downstream 100 bases:

>100_bases
CCGGCGCGCACGACGCCGGCAACGACGAACGACGACAGGGAAACATCAGGAATGCGCCGCGCCCGCGGCGCCAATCACAA
CTACGTACGGATGGAGATGA

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MTQQNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSSSTKLIHGGLRYLEYKEFGLVRKALQERETLLRA
APHIIWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHPAGAPLVDSIKRGFVYSDGWVDDARLVVL
NALDAQERGARILTRTKLVSAERRDGQWHARLQRADGSTLDVCARAVANAAGPWVGDVLHGALGRGAQHSVRLVKGSHIV
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYRDDPSRVAIDRDETRYLCESINRYFKRKISPADVCWTYSG
VRPLLEDENADNPSAVTRDYRLELDGGDGAPLLSVFGGKITTFRKLAEEATDMLGGALGASRGAWTAGVPLPGGDIADAR
FAPFAEAFAKRHPWLPAALARRYARAYGTRAERVIGGAKSLAELGAELAPGLYEAELRYLRDAEWASCADDVLWRRSKLG
LHVAPGTLDAVTAALDAWFGAAREAASAAH

Sequences:

>Translated_510_residues
MTQQNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSSSTKLIHGGLRYLEYKEFGLVRKALQERETLLRA
APHIIWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHPAGAPLVDSIKRGFVYSDGWVDDARLVVL
NALDAQERGARILTRTKLVSAERRDGQWHARLQRADGSTLDVCARAVANAAGPWVGDVLHGALGRGAQHSVRLVKGSHIV
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYRDDPSRVAIDRDETRYLCESINRYFKRKISPADVCWTYSG
VRPLLEDENADNPSAVTRDYRLELDGGDGAPLLSVFGGKITTFRKLAEEATDMLGGALGASRGAWTAGVPLPGGDIADAR
FAPFAEAFAKRHPWLPAALARRYARAYGTRAERVIGGAKSLAELGAELAPGLYEAELRYLRDAEWASCADDVLWRRSKLG
LHVAPGTLDAVTAALDAWFGAAREAASAAH
>Mature_509_residues
TQQNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSSSTKLIHGGLRYLEYKEFGLVRKALQERETLLRAA
PHIIWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHPAGAPLVDSIKRGFVYSDGWVDDARLVVLN
ALDAQERGARILTRTKLVSAERRDGQWHARLQRADGSTLDVCARAVANAAGPWVGDVLHGALGRGAQHSVRLVKGSHIVT
RRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYRDDPSRVAIDRDETRYLCESINRYFKRKISPADVCWTYSGV
RPLLEDENADNPSAVTRDYRLELDGGDGAPLLSVFGGKITTFRKLAEEATDMLGGALGASRGAWTAGVPLPGGDIADARF
APFAEAFAKRHPWLPAALARRYARAYGTRAERVIGGAKSLAELGAELAPGLYEAELRYLRDAEWASCADDVLWRRSKLGL
HVAPGTLDAVTAALDAWFGAAREAASAAH

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=518, Percent_Identity=28.957528957529, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI285002231, Length=518, Percent_Identity=28.957528957529, Blast_Score=170, Evalue=2e-42,
Organism=Escherichia coli, GI2367226, Length=454, Percent_Identity=51.3215859030837, Blast_Score=445, Evalue=1e-126,
Organism=Escherichia coli, GI1788574, Length=492, Percent_Identity=28.8617886178862, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI115534726, Length=517, Percent_Identity=28.6266924564797, Blast_Score=163, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17509253, Length=514, Percent_Identity=29.7665369649805, Blast_Score=159, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6322036, Length=576, Percent_Identity=26.3888888888889, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI161077125, Length=527, Percent_Identity=29.0322580645161, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24653942, Length=527, Percent_Identity=29.0322580645161, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24653944, Length=527, Percent_Identity=29.0322580645161, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI20130025, Length=527, Percent_Identity=29.0322580645161, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI19921278, Length=520, Percent_Identity=25.1923076923077, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24586295, Length=393, Percent_Identity=28.498727735369, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 56127; Mature: 55996

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00977 FAD_G3PDH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSSSTKLIHGGLRYLE
CCCCCCEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCHHHCCCCCCCCHHHHCCHHHHH
YKEFGLVRKALQERETLLRAAPHIIWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHPAGAPLVDSIKRGFVYSDGWVDDARLVVLNALDAQERGARILTRTKLVS
CCCCCCCCCCCCCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHH
AERRDGQWHARLQRADGSTLDVCARAVANAAGPWVGDVLHGALGRGAQHSVRLVKGSHIV
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCHHH
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYRDDPSRVAIDRDETRYLCES
HHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHH
INRYFKRKISPADVCWTYSGVRPLLEDENADNPSAVTRDYRLELDGGDGAPLLSVFGGKI
HHHHHHHCCCHHHEEEECCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCHH
TTFRKLAEEATDMLGGALGASRGAWTAGVPLPGGDIADARFAPFAEAFAKRHPWLPAALA
HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHH
RRYARAYGTRAERVIGGAKSLAELGAELAPGLYEAELRYLRDAEWASCADDVLWRRSKLG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LHVAPGTLDAVTAALDAWFGAAREAASAAH
EEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQQNRYDLLVVGGGINGAGIARDAAGRGLSVLLCEQDDLASHTSSSSTKLIHGGLRYLE
CCCCCEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCHHHCCCCCCCCHHHHCCHHHHH
YKEFGLVRKALQERETLLRAAPHIIWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHPAGAPLVDSIKRGFVYSDGWVDDARLVVLNALDAQERGARILTRTKLVS
CCCCCCCCCCCCCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHH
AERRDGQWHARLQRADGSTLDVCARAVANAAGPWVGDVLHGALGRGAQHSVRLVKGSHIV
HHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCHHH
TRRLFDHDHAYIFQNPDKRIIFAIPYERDFTLIGTTDVEYRDDPSRVAIDRDETRYLCES
HHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHH
INRYFKRKISPADVCWTYSGVRPLLEDENADNPSAVTRDYRLELDGGDGAPLLSVFGGKI
HHHHHHHCCCHHHEEEECCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCHH
TTFRKLAEEATDMLGGALGASRGAWTAGVPLPGGDIADARFAPFAEAFAKRHPWLPAALA
HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHH
RRYARAYGTRAERVIGGAKSLAELGAELAPGLYEAELRYLRDAEWASCADDVLWRRSKLG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
LHVAPGTLDAVTAALDAWFGAAREAASAAH
EEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157588; 10984043 [H]