| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720079
Identifier: 83720079
GI number: 83720079
Start: 3313135
End: 3314217
Strand: Reverse
Name: 83720079
Synonym: BTH_I2880
Alternate gene names: NA
Gene position: 3314217-3313135 (Counterclockwise)
Preceding gene: 83721543
Following gene: 83718410
Centisome position: 87.01
GC content: 67.77
Gene sequence:
>1083_bases ATGCCCGTGCTGAGCGTATCGTTCAGGCCGAAGAGCGGGTTCGTCGTGCCCGTCGCGATCGCGGGCAAGACTTATCGCTT TCTCGTCGACACGGGCGCGAGCCACACGGCGATCGACAATCGGCTCGCGCAGTCGATCACGCGGCCGTCGACCGACGATC AGATTCCGATCGCGTACCGGACGATGCTCGAAAAAGGCTTGACGACCGCGAACGGCGTGCTGCCGGGCGCGCGCGTGCGC CTGTGGCAGCCGCTGCCGATCGCGCTCGGCAGCTACGAAGTGCCGAGTTTCTATCCGTGGCTCGGTCTCGATCTATCGTT GCTGTCGCAGGTGCTGGGCACGCAGATCGACGGCATCGTCGGCATCGAGATCTTTCGCCAACTGAGCTGGGTCGCCGACA ATCGCAGCGGCACGCTGACGGTCTGGCGCCATCCGCCCGCCGGGCAGCGCTTCGCGCATTGCGTGCCGTACCAGGACAGC TTCGGCCAATCGCCCGCCGTGAGCGTCGATTTTCGCGATCAGTGGACGATGTTCCGCTTCGATACCGGCGCGAGCTATTC GATCGCGTCGGCGCCGACGCTCGCGTACCTTGCGAGCCGCAAGGCCGCGACGCCGCTCGGCGGCACGGGGCCGAGCATGT CGGCCAACGGCGTCGGCCAATCGCGCGATCACTTCGTGAGCGGGCTGTCGTTCGACGGCCAGCCCGTCGGCCGCCTGCGC GTGGCCGAGGGCGGCGGCGACATGCTCGGGATGAACTTTCTCGCGCGGTTCGACCGCTACATGTTCGTGCCGAGCACGAT GGAGTTCTGCTACGACGCGAGCCGCTTCACGCGGGACGATCCCCGGCCGCTGCGCACGATCGCGATCCGCTTCGTCGACG GCCGCGTCGAGCTCTTCCACAACCGGCCGGAGGATCTCGGCCGCTACGGCCTCGAGAACGGCGACGTGCTCGTCGAGATC GACGGCAAGCGCGTCGAAGCGTCGGCGATCGACGACGTGCGCGACCGATTGAACACCGCGCCCGCCGGCTCGCTCGATAT CGCGATCGAGCGCGGTGGTTCGCGCCGCGCCGTGCGGATTTGA
Upstream 100 bases:
>100_bases TCGCGGGCCGCGCGCGTTGGCGACCGCCGCGCTCGTCTGTGCCGCCGCGCTTCTCGCCGCGGGTTGCGGCGAACGCGCCG AGCCGCAGCGCGGCGGCGCG
Downstream 100 bases:
>100_bases CGCACGTCATGAACGGGGCCGCGCATGCGGCCGCGAGCGGTGTGTTTCACGCATCGCAACGTTGCTGCCACGCGCGTGAT CGACGCGCGTAACGCATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MPVLSVSFRPKSGFVVPVAIAGKTYRFLVDTGASHTAIDNRLAQSITRPSTDDQIPIAYRTMLEKGLTTANGVLPGARVR LWQPLPIALGSYEVPSFYPWLGLDLSLLSQVLGTQIDGIVGIEIFRQLSWVADNRSGTLTVWRHPPAGQRFAHCVPYQDS FGQSPAVSVDFRDQWTMFRFDTGASYSIASAPTLAYLASRKAATPLGGTGPSMSANGVGQSRDHFVSGLSFDGQPVGRLR VAEGGGDMLGMNFLARFDRYMFVPSTMEFCYDASRFTRDDPRPLRTIAIRFVDGRVELFHNRPEDLGRYGLENGDVLVEI DGKRVEASAIDDVRDRLNTAPAGSLDIAIERGGSRRAVRI
Sequences:
>Translated_360_residues MPVLSVSFRPKSGFVVPVAIAGKTYRFLVDTGASHTAIDNRLAQSITRPSTDDQIPIAYRTMLEKGLTTANGVLPGARVR LWQPLPIALGSYEVPSFYPWLGLDLSLLSQVLGTQIDGIVGIEIFRQLSWVADNRSGTLTVWRHPPAGQRFAHCVPYQDS FGQSPAVSVDFRDQWTMFRFDTGASYSIASAPTLAYLASRKAATPLGGTGPSMSANGVGQSRDHFVSGLSFDGQPVGRLR VAEGGGDMLGMNFLARFDRYMFVPSTMEFCYDASRFTRDDPRPLRTIAIRFVDGRVELFHNRPEDLGRYGLENGDVLVEI DGKRVEASAIDDVRDRLNTAPAGSLDIAIERGGSRRAVRI >Mature_359_residues PVLSVSFRPKSGFVVPVAIAGKTYRFLVDTGASHTAIDNRLAQSITRPSTDDQIPIAYRTMLEKGLTTANGVLPGARVRL WQPLPIALGSYEVPSFYPWLGLDLSLLSQVLGTQIDGIVGIEIFRQLSWVADNRSGTLTVWRHPPAGQRFAHCVPYQDSF GQSPAVSVDFRDQWTMFRFDTGASYSIASAPTLAYLASRKAATPLGGTGPSMSANGVGQSRDHFVSGLSFDGQPVGRLRV AEGGGDMLGMNFLARFDRYMFVPSTMEFCYDASRFTRDDPRPLRTIAIRFVDGRVELFHNRPEDLGRYGLENGDVLVEID GKRVEASAIDDVRDRLNTAPAGSLDIAIERGGSRRAVRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39435; Mature: 39304
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLSVSFRPKSGFVVPVAIAGKTYRFLVDTGASHTAIDNRLAQSITRPSTDDQIPIAYR CCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHH TMLEKGLTTANGVLPGARVRLWQPLPIALGSYEVPSFYPWLGLDLSLLSQVLGTQIDGIV HHHHHCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCH GIEIFRQLSWVADNRSGTLTVWRHPPAGQRFAHCVPYQDSFGQSPAVSVDFRDQWTMFRF HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCHHHCCCCCEEEEEECCCEEEEEE DTGASYSIASAPTLAYLASRKAATPLGGTGPSMSANGVGQSRDHFVSGLSFDGQPVGRLR CCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE VAEGGGDMLGMNFLARFDRYMFVPSTMEFCYDASRFTRDDPRPLRTIAIRFVDGRVELFH EECCCCCCHHHHHHHHHHHEEECCCHHHHHHCHHHCCCCCCCCEEEEEEEEECCEEEEEC NRPEDLGRYGLENGDVLVEIDGKRVEASAIDDVRDRLNTAPAGSLDIAIERGGSRRAVRI CCCHHHHHCCCCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEC >Mature Secondary Structure PVLSVSFRPKSGFVVPVAIAGKTYRFLVDTGASHTAIDNRLAQSITRPSTDDQIPIAYR CEEEEEECCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHH TMLEKGLTTANGVLPGARVRLWQPLPIALGSYEVPSFYPWLGLDLSLLSQVLGTQIDGIV HHHHHCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCH GIEIFRQLSWVADNRSGTLTVWRHPPAGQRFAHCVPYQDSFGQSPAVSVDFRDQWTMFRF HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCHHHCCCCCEEEEEECCCEEEEEE DTGASYSIASAPTLAYLASRKAATPLGGTGPSMSANGVGQSRDHFVSGLSFDGQPVGRLR CCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE VAEGGGDMLGMNFLARFDRYMFVPSTMEFCYDASRFTRDDPRPLRTIAIRFVDGRVELFH EECCCCCCHHHHHHHHHHHEEECCCHHHHHHCHHHCCCCCCCCEEEEEEEEECCEEEEEC NRPEDLGRYGLENGDVLVEIDGKRVEASAIDDVRDRLNTAPAGSLDIAIERGGSRRAVRI CCCHHHHHCCCCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA