| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hemK [H]
Identifier: 83720020
GI number: 83720020
Start: 3369566
End: 3370423
Strand: Direct
Name: hemK [H]
Synonym: BTH_I2931
Alternate gene names: 83720020
Gene position: 3369566-3370423 (Clockwise)
Preceding gene: 83720975
Following gene: 83720718
Centisome position: 88.46
GC content: 74.01
Gene sequence:
>858_bases ATGAACACGACGAGCCCCGCGCACGCCACCGCCGCCCGCCTGCTGCGCGCGTCGCCGCTCGACGCGGTCGACGCGCGAAT CCTGCTCGCGCACGCGCTCGGCTGGAGCCGCACGCAGTTGATCACGCGCGCCGACGAGCCGCTCGACGCGGCGGCGATCG AGCGCTATCTGGCGCTCGAAGCGCGCCGCGCGGCGGGCGAGCCGGTCGCGCAGCTCACCGGCGCGCGCGAGTTCTTCGGC CTCGATTTCGACGTCACGCCGGACGTGCTGATCCCGCGCCCGGAGACGGAGCTGCTCGTCGAGACGGCGCTCGACGCGAT CGACGGCATCGCGTCGCCATGCGTGCTCGATCTCGGCGCGGGCAGCGGCGCGATCGCGGTGTCGATCGCGTCCGTGCGGC CGGACGCGCGCGTGTGGGCGCTCGACCGCTCGGCCGCCGCGCTCGACGTCGCGCGCCGCAATGCGCGCAAGCTGCTCGAT CCGGCGCGCGCGGGCGGCCCGCTGCGGTTTCTCGAAAGCGACTGGTACGCGGCGCTCGATCCCGGCCTGCGCTTTCACGT CGTCGTCAGCAACCCACCGTACATCGCGCGGCACGATCCGCATCTCGCCGAAGGCGACCTGCGCTTCGAGCCGCGCGGCG CGCTCACCGACGAAGACGACGGCCTCGCCGCGATCCGCACGATCGTTGCGGGCGCGCATGCGTTCGTCGCTCCGGGCGGC GCGCTGTGGATCGAACACGGTTACGATCAGGCGGCCGCGGTGCGCGCGCTGCTCGAAGCGGCGGGCTTCGCCGACGTCGA ATCGCTTGCGGATCTCGCATCGATCGAGCGCGCGACGGGCGGCCGCCTGCCCGGCTGA
Upstream 100 bases:
>100_bases CTCGACGAGCTGATCGCCGCGCTCGTCAGCGAGCACCAGGCCGAGCTGCTCGCGTCGCTCGGCGACGCCGAATGACGCCG CCCGCCCCACGCGCCCCCCG
Downstream 100 bases:
>100_bases CGGGGCGCTCGCCGCCCGCCGGCCCAGGTGAAATCCAGTATCATTTCTTTTCTCACGCCCAGCCACAGCAAGGTCAGTCA TGGACACCCAACAACGCATC
Product: hemK protein
Products: NA
Alternate protein names: M.XfaHemK2P [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNTTSPAHATAARLLRASPLDAVDARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFG LDFDVTPDVLIPRPETELLVETALDAIDGIASPCVLDLGAGSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLD PARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLRFEPRGALTDEDDGLAAIRTIVAGAHAFVAPGG ALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERATGGRLPG
Sequences:
>Translated_285_residues MNTTSPAHATAARLLRASPLDAVDARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFG LDFDVTPDVLIPRPETELLVETALDAIDGIASPCVLDLGAGSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLD PARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLRFEPRGALTDEDDGLAAIRTIVAGAHAFVAPGG ALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERATGGRLPG >Mature_285_residues MNTTSPAHATAARLLRASPLDAVDARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFG LDFDVTPDVLIPRPETELLVETALDAIDGIASPCVLDLGAGSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLD PARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLRFEPRGALTDEDDGLAAIRTIVAGAHAFVAPGG ALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERATGGRLPG
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=259, Percent_Identity=30.5019305019305, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1787463, Length=269, Percent_Identity=44.9814126394052, Blast_Score=204, Evalue=4e-54, Organism=Escherichia coli, GI87082085, Length=182, Percent_Identity=34.0659340659341, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24582226, Length=271, Percent_Identity=27.6752767527675, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 30074; Mature: 30074
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTSPAHATAARLLRASPLDAVDARILLAHALGWSRTQLITRADEPLDAAAIERYLALE CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH ARRAAGEPVAQLTGAREFFGLDFDVTPDVLIPRPETELLVETALDAIDGIASPCVLDLGA HHHHCCCCHHHHHCCHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC GSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLDPARAGGPLRFLESDWYAALD CCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHCCCCEEEECCCCCEEEC PGLRFHVVVSNPPYIARHDPHLAEGDLRFEPRGALTDEDDGLAAIRTIVAGAHAFVAPGG CCCEEEEEECCCCEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCHHEECCCC ALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERATGGRLPG EEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTTSPAHATAARLLRASPLDAVDARILLAHALGWSRTQLITRADEPLDAAAIERYLALE CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH ARRAAGEPVAQLTGAREFFGLDFDVTPDVLIPRPETELLVETALDAIDGIASPCVLDLGA HHHHCCCCHHHHHCCHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC GSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLDPARAGGPLRFLESDWYAALD CCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHCCCCEEEECCCCCEEEC PGLRFHVVVSNPPYIARHDPHLAEGDLRFEPRGALTDEDDGLAAIRTIVAGAHAFVAPGG CCCEEEEEECCCCEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCHHEECCCC ALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERATGGRLPG EEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]