| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is cbaA [H]
Identifier: 83719903
GI number: 83719903
Start: 2623372
End: 2624352
Strand: Reverse
Name: cbaA [H]
Synonym: BTH_I2331
Alternate gene names: 83719903
Gene position: 2624352-2623372 (Counterclockwise)
Preceding gene: 83721628
Following gene: 83721555
Centisome position: 68.9
GC content: 73.5
Gene sequence:
>981_bases ATGGATACCGTCGTTCCGCTTCTTTCCGACTCCGCCGCGCGCTGGCTGCCGCTCGCGCTGTCCGAGCAGGTGAGCGGCAA GGCCCCGCTCGCCGTCATGTGCATGGGGCAGCCGATCGTGCTGTTTCGCGATGCGGCCGGCGCCGCCCGCGCGATGGAGG ACCGGTGCGCGCATCGGCGCGCGCCGCTGTCGCTCGGCCGCGTGACGCCCGAGGGCCGGCTGCAGTGCGGCTATCACGGC TGGACCTATGACGGCGCGAGCGGCGCGTGCGTCGCGATCCCCAATCTGTCGCACGACGAGCGGGTGCCGGCGCACTACGC GGCGCGCGCGTACGAGACGTTCGAGCGCGACGGCTACGTATGGGGACGCGCGGCGCTCGGCGTCGACACGCGTGAGCTGG CCGCGGCGTTCGCGCGCGCGTCGCGCTGCGCGCAGCGCTTCGCCGGCTGCGCGACGGTGACCGTCGCCTACGACGAATAT GTCGCCGCGCTCGCCGACGGCCCGCACTTGCTGATGCGCATCGCGGGCCTGCGCATCACGGACTACGTGATCGCCGATCC CGAGCCGCGCGGCGGACGCATCGACATGGAGCGCGGCGTCACGTGGGCGGCGCGCCGGCACGATCACCGTTTCGGCGCGC ATTATCCGTGGACGCTTCGGCTCGCGCCGCCGCAGGACGGCGCGCCCGCATCGGTCGAAATCGACACGCGCGACGGCGCG CCGATGCTGTGGGCGTCCGTGGCCATGACGCCCGCGGCGCGCGGCACGACGAACGTCCTGTGGCGCGGCGGCGTCTCGGC CGATACCGGCGGCCCCGGCGCCACGTTGTTTCGCCTGTGGGCGCGGCTGCGCCGCCCGCCGTTCGCGATGCTCGAACACG TCGACGGACGCGCGCTGTCGAAACTCGACGCGTCGTGCTCGCGCGACGCGCGCGTCATTCCGGTCGGGTCCGACCGATTG CCGTGCGAGAGGAGCAGATGA
Upstream 100 bases:
>100_bases TTCGCCGGCGGAATTTCGCGCGCCGCAGGCGCATGCGGCCGGCGGCGACGCCCGTCTGCCGGGATTGCCGGAGGTATCGC GCCCGTCGCGATAAATGCCC
Downstream 100 bases:
>100_bases TGGCGACCGTTGACGAAGAAGACATCGGCGCGACGAGCAGCCGCGACGAAGGCGACTGGGTGCCCAACCGGTTTTGCTTG CGCAACGCGTGGTTTCCGCT
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MDTVVPLLSDSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRRAPLSLGRVTPEGRLQCGYHG WTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYVWGRAALGVDTRELAAAFARASRCAQRFAGCATVTVAYDEY VAALADGPHLLMRIAGLRITDYVIADPEPRGGRIDMERGVTWAARRHDHRFGAHYPWTLRLAPPQDGAPASVEIDTRDGA PMLWASVAMTPAARGTTNVLWRGGVSADTGGPGATLFRLWARLRRPPFAMLEHVDGRALSKLDASCSRDARVIPVGSDRL PCERSR
Sequences:
>Translated_326_residues MDTVVPLLSDSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRRAPLSLGRVTPEGRLQCGYHG WTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYVWGRAALGVDTRELAAAFARASRCAQRFAGCATVTVAYDEY VAALADGPHLLMRIAGLRITDYVIADPEPRGGRIDMERGVTWAARRHDHRFGAHYPWTLRLAPPQDGAPASVEIDTRDGA PMLWASVAMTPAARGTTNVLWRGGVSADTGGPGATLFRLWARLRRPPFAMLEHVDGRALSKLDASCSRDARVIPVGSDRL PCERSR >Mature_326_residues MDTVVPLLSDSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRRAPLSLGRVTPEGRLQCGYHG WTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYVWGRAALGVDTRELAAAFARASRCAQRFAGCATVTVAYDEY VAALADGPHLLMRIAGLRITDYVIADPEPRGGRIDMERGVTWAARRHDHRFGAHYPWTLRLAPPQDGAPASVEIDTRDGA PMLWASVAMTPAARGTTNVLWRGGVSADTGGPGATLFRLWARLRRPPFAMLEHVDGRALSKLDASCSRDARVIPVGSDRL PCERSR
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: NA
Molecular weight: Translated: 35342; Mature: 35342
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTVVPLLSDSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRR CCCCCCCCCCCCHHEEEHHHHHCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHC APLSLGRVTPEGRLQCGYHGWTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYV CCCHHCCCCCCCCEEECCCCCEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEE WGRAALGVDTRELAAAFARASRCAQRFAGCATVTVAYDEYVAALADGPHLLMRIAGLRIT EEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCHHHHHHHHCCEEE DYVIADPEPRGGRIDMERGVTWAARRHDHRFGAHYPWTLRLAPPQDGAPASVEIDTRDGA EEEEECCCCCCCEEEHHCCCEEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCC PMLWASVAMTPAARGTTNVLWRGGVSADTGGPGATLFRLWARLRRPPFAMLEHVDGRALS CEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCHHHH KLDASCSRDARVIPVGSDRLPCERSR HHHHHCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MDTVVPLLSDSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRR CCCCCCCCCCCCHHEEEHHHHHCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHC APLSLGRVTPEGRLQCGYHGWTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYV CCCHHCCCCCCCCEEECCCCCEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEE WGRAALGVDTRELAAAFARASRCAQRFAGCATVTVAYDEYVAALADGPHLLMRIAGLRIT EEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCHHHHHHHHCCEEE DYVIADPEPRGGRIDMERGVTWAARRHDHRFGAHYPWTLRLAPPQDGAPASVEIDTRDGA EEEEECCCCCCCEEEHHCCCEEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCC PMLWASVAMTPAARGTTNVLWRGGVSADTGGPGATLFRLWARLRRPPFAMLEHVDGRALS CEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCHHHH KLDASCSRDARVIPVGSDRLPCERSR HHHHHCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]