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The map label for this gene is recD [H]

Identifier: 83719901

GI number: 83719901

Start: 3268223

End: 3270922

Strand: Reverse

Name: recD [H]

Synonym: BTH_I2850

Alternate gene names: 83719901

Gene position: 3270922-3268223 (Counterclockwise)

Preceding gene: 83720729

Following gene: 83718425

Centisome position: 85.87

GC content: 74.33

Gene sequence:

>2700_bases
ATGAGCGTGGTCGACGAACGTTTCGCATGGACGGGCGGTCTGGCGGACCGCCTGCCCGAGCCGGCCGATTTCGGGCTCGC
GCTTGCCGAAGGTTTCGCGCGCCGGATCGGGATGCTGTCGCGCCGCGTCGGCGCGAGCGCCGCGGCCGCGCGCTGGGCGG
CGCGCGCGGCGTTCGCCGCGAGCCGCGCGACGGCGGCGGGGCACGTCTGCGTGTCGCTGCGCGCGCTCGCGCAACGCTAC
GACGAGCCGTTCGCCGACGTGCGCGACGCGCTCGCCGCGAGCGGCGTGACCGCGTTCGACAGCATCGCGCGCGGCGCCGA
GCGTCCGCTCGTCGTCGACCGCGACGGCCGGCTGTATCTCGCGCGCTACTTCGAATACGAGACGCGGCTTGCGAGCGCGC
TCGTCGCGCGCGCCCGGTGCGGCGGCGCGCAAGCGGGCGATGCCGGCGAATTGATGCCCGAGGCGCTCGGCGAACGGCTC
GTCCGCTATTTCGGGCCGCAGAAGGAGCGGGGCGTCGACTGGCAGCGCGTCGCGGCGCTCGTCGCGCTCACGGGCCGGGT
GACGATCGTGAGCGGCGGGCCGGGCACCGGCAAGACGACGACGGTCGTCGGCGTGATCGCGTGTCTGCTCGACGCGCACC
CCGACTTGCGGATCGCGCTCGCCGCGCCGACCGGCAAGGCGGCGCAGCGGATGCAGGAGGCGCTGCACGCACGCGCCGGC
AGCCTGCCGGCCGAGCTCGCGGCGCGTCTGCCGCGCACGTCCTATACGCTGCACCGGCTGCTGGGCGGCGGTCCGGGCGG
GCGCTTCGCGCATCATCGCGACAACCCGTTGCCATACGATCTCGTCGTCGTCGACGAGGCGTCGATGATCGACGTCGCGC
TCGCCGCGCACTTGCTCGATGCGCTCGCGCCGAACGCGCGCCTCGTGCTGCTCGGCGACAAGGATCAGCTCGCGGCCGTC
GAGGCGGGTGCGGTGTTTGCCGAGCTGAGCGCGCGTCCCGCGTTCAGCTCGGCGACGTGCGCGACGATTGCGCGCGCGCT
CGGCGTCGGAGAGGCCGAATTCGTGGCGGCGCTGCCGCAGGGGGGCGTTCTGCATGCGGCCGATGCGGCGAACGCGGGCG
CGAGCGCGGACGCACGCGCGACTTCGGTCGACACGGGCGCGGCGGCGCTGGCCGCACGAGCGACGGGTGCCGTCGCCGCG
GCGAAGGTCGCGCCGGAAGCCCCGGCTCAGCGCGCGCCGGCGCCGCGCGCGGGCCGGCGCGGCGGCGGGCGCGAATCGAA
ACGGGGTGTCGACGACGCGCAGGGATGGCTGTTCGCGTTCGAAGACGAAGATGCGTTCAGCGCGGAGGCGTCAGGTGCCG
GTGCGTCAGGCGCCGATGAGTCGGGCGCGGAGGCGTTGGGCGTCGGTACGTCGGGTGCCGATGCGCAGGATGTCGGCACG
TCGAGCATCGATCGCCGCGACGATCGTGCATCGCTTGATACCCCGCGCCGCCGGCGTGACGCGCTCGCCACGCATGTTCG
AGCGGATTCGCCGGGCGCGCGCGACATTGAAAACGCCGCGTACGTGCACGCACAGGCCGATGAAGCCGGCGTCGCCGATT
TGCCGTGGGATGCGTCTTTCGCCGAGCCCGCCGCGTGGATCGAGGCTGGCGAACTCGAGTGGCTCGACAACGCGGACTTT
TCGATATCCGAAGGCGCTTCGGCGAATGCCGGCTCCGATGAGCGGCGAACCGCGACGGCAACGGATGCAAGCGCCGGCGG
CGCGCGCGCACAGGCCGGCCGGGTGCCCGCCGCCCACGCCGGGCCGGATATCGAACCGCAAGCGTCGGCACCGGCGAACC
CGGCCGGGGCCCCGTCACCGGACGCCGATGCCGCCGCCGCGCCGTTGACCGACTGCGTCATCTGGCTCGAACGCAATTAC
CGCTTCGGCCTCGACTCGCCGATCGGCAGGCTGTCGCTCGCGATCCGCCGCGGCGCCGTGCAGGACGCGCTCGATGCGTT
GTCGACGGCCGACGACGCGGCCGCGCGCTGGTGCGACGACGGCGGCGCGACGCTGTCGGCCGCGACGGTCGGGCAACTCG
CGCGGGGCTTCGCCGGCTACGCGGCCGCGTTGCGCGACGCGCTCGCGACGCCCGATCCCGATCCGCTGCCGCTCTTCGAC
GTGCTCAACCGCTTTCGCGTGCTCTGCGCGACGCGAACGGGCGCGCGCGGCGCGGACGAGGTCAACGCGCTCGTCGCGGC
CGAGGTGCGGCGAGCGGTGCGCGTGCCGCTCGCGCTCGGCGCGCACTGGTTCGCGGGGCGGCCCGTGATGGTGACGCGCA
ACGATTACGCGCTCGGACTCTTCAATGGCGACATCGGCATTGCGCTGCCCGGCGCGCGTGGCGCGTTGCGCGTCTGGTTC
CGCGGCGCGGACGGCCGCGCGCGCGCGGTGTCGCCCGCCGCGCTGCCGCCGCACGATACGGCGTTCGCGCTGACCGTCCA
CAAATCGCAGGGCTCGGAGTTCGACGACGCGGCGCTGGTCCTGCCCGCGTCGTTCAACCGTGTGCTGTCGCGCGAGCTTG
TCTACACCGCGATCACGCGCGCGCGCTCGCGCGTGCGCGTGATCGGCGCGCGCGCGGTGCTCGCGCTCGCGATCGCGACG
CGCACGGCGCGCGATTCCGGTCTCGCCGCACGGATCGCCGATGCGCTGCGCACACGATAG

Upstream 100 bases:

>100_bases
CCGATTGGCGAAGCGGCGGCGCGAGCGCCGGCGTGCACGCGCGCCGGCCCGCGCGCGCGCTGATCGAGGCGCTCGACGCG
CTGATGCTCGAGGGGGGCGC

Downstream 100 bases:

>100_bases
GAGGGCGCGCGATGACGCTGCGCTACGCATTTTCGCCGGACGAGGTCGAGCTGACGGCGGTTCGCGCGCAAGGCGCGGGC
GGACAGAACGTCAACAAGGT

Product: exodeoxyribonuclease V subunit alpha

Products: NA

Alternate protein names: Exodeoxyribonuclease V 67 kDa polypeptide [H]

Number of amino acids: Translated: 899; Mature: 898

Protein sequence:

>899_residues
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASRATAAGHVCVSLRALAQRY
DEPFADVRDALAASGVTAFDSIARGAERPLVVDRDGRLYLARYFEYETRLASALVARARCGGAQAGDAGELMPEALGERL
VRYFGPQKERGVDWQRVAALVALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAG
SLPAELAARLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLDALAPNARLVLLGDKDQLAAV
EAGAVFAELSARPAFSSATCATIARALGVGEAEFVAALPQGGVLHAADAANAGASADARATSVDTGAAALAARATGAVAA
AKVAPEAPAQRAPAPRAGRRGGGRESKRGVDDAQGWLFAFEDEDAFSAEASGAGASGADESGAEALGVGTSGADAQDVGT
SSIDRRDDRASLDTPRRRRDALATHVRADSPGARDIENAAYVHAQADEAGVADLPWDASFAEPAAWIEAGELEWLDNADF
SISEGASANAGSDERRTATATDASAGGARAQAGRVPAAHAGPDIEPQASAPANPAGAPSPDADAAAAPLTDCVIWLERNY
RFGLDSPIGRLSLAIRRGAVQDALDALSTADDAAARWCDDGGATLSAATVGQLARGFAGYAAALRDALATPDPDPLPLFD
VLNRFRVLCATRTGARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARGALRVWF
RGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALVLPASFNRVLSRELVYTAITRARSRVRVIGARAVLALAIAT
RTARDSGLAARIADALRTR

Sequences:

>Translated_899_residues
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASRATAAGHVCVSLRALAQRY
DEPFADVRDALAASGVTAFDSIARGAERPLVVDRDGRLYLARYFEYETRLASALVARARCGGAQAGDAGELMPEALGERL
VRYFGPQKERGVDWQRVAALVALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAG
SLPAELAARLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLDALAPNARLVLLGDKDQLAAV
EAGAVFAELSARPAFSSATCATIARALGVGEAEFVAALPQGGVLHAADAANAGASADARATSVDTGAAALAARATGAVAA
AKVAPEAPAQRAPAPRAGRRGGGRESKRGVDDAQGWLFAFEDEDAFSAEASGAGASGADESGAEALGVGTSGADAQDVGT
SSIDRRDDRASLDTPRRRRDALATHVRADSPGARDIENAAYVHAQADEAGVADLPWDASFAEPAAWIEAGELEWLDNADF
SISEGASANAGSDERRTATATDASAGGARAQAGRVPAAHAGPDIEPQASAPANPAGAPSPDADAAAAPLTDCVIWLERNY
RFGLDSPIGRLSLAIRRGAVQDALDALSTADDAAARWCDDGGATLSAATVGQLARGFAGYAAALRDALATPDPDPLPLFD
VLNRFRVLCATRTGARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARGALRVWF
RGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALVLPASFNRVLSRELVYTAITRARSRVRVIGARAVLALAIAT
RTARDSGLAARIADALRTR
>Mature_898_residues
SVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASRATAAGHVCVSLRALAQRYD
EPFADVRDALAASGVTAFDSIARGAERPLVVDRDGRLYLARYFEYETRLASALVARARCGGAQAGDAGELMPEALGERLV
RYFGPQKERGVDWQRVAALVALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAGS
LPAELAARLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLDALAPNARLVLLGDKDQLAAVE
AGAVFAELSARPAFSSATCATIARALGVGEAEFVAALPQGGVLHAADAANAGASADARATSVDTGAAALAARATGAVAAA
KVAPEAPAQRAPAPRAGRRGGGRESKRGVDDAQGWLFAFEDEDAFSAEASGAGASGADESGAEALGVGTSGADAQDVGTS
SIDRRDDRASLDTPRRRRDALATHVRADSPGARDIENAAYVHAQADEAGVADLPWDASFAEPAAWIEAGELEWLDNADFS
ISEGASANAGSDERRTATATDASAGGARAQAGRVPAAHAGPDIEPQASAPANPAGAPSPDADAAAAPLTDCVIWLERNYR
FGLDSPIGRLSLAIRRGAVQDALDALSTADDAAARWCDDGGATLSAATVGQLARGFAGYAAALRDALATPDPDPLPLFDV
LNRFRVLCATRTGARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARGALRVWFR
GADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALVLPASFNRVLSRELVYTAITRARSRVRVIGARAVLALAIATR
TARDSGLAARIADALRTR

Specific function: Exhibits several catalytic activities, including ATP- dependent exonuclease, ATP-stimulated endonuclease, ATP-dependent unwinding and DNA-dependent ATPase activities. Strand cleavage occurs 5' to 3' during the unwinding of duplex DNA at CHI sequences, whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recD family [H]

Homologues:

Organism=Escherichia coli, GI1789182, Length=267, Percent_Identity=43.8202247191011, Blast_Score=200, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007807
- InterPro:   IPR006344
- InterPro:   IPR000606 [H]

Pfam domain/function: PF05127 DUF699; PF01443 Viral_helicase1 [H]

EC number: =3.1.11.5 [H]

Molecular weight: Translated: 92760; Mature: 92629

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAA
CCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SRATAAGHVCVSLRALAQRYDEPFADVRDALAASGVTAFDSIARGAERPLVVDRDGRLYL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCEEE
ARYFEYETRLASALVARARCGGAQAGDAGELMPEALGERLVRYFGPQKERGVDWQRVAAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAG
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
SLPAELAARLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLD
CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
ALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSSATCATIARALGVGEAEFVAALPQ
HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEECCC
GGVLHAADAANAGASADARATSVDTGAAALAARATGAVAAAKVAPEAPAQRAPAPRAGRR
CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCHHCCCCCCCCCC
GGGRESKRGVDDAQGWLFAFEDEDAFSAEASGAGASGADESGAEALGVGTSGADAQDVGT
CCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCC
SSIDRRDDRASLDTPRRRRDALATHVRADSPGARDIENAAYVHAQADEAGVADLPWDASF
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
AEPAAWIEAGELEWLDNADFSISEGASANAGSDERRTATATDASAGGARAQAGRVPAAHA
CCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
GPDIEPQASAPANPAGAPSPDADAAAAPLTDCVIWLERNYRFGLDSPIGRLSLAIRRGAV
CCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH
QDALDALSTADDAAARWCDDGGATLSAATVGQLARGFAGYAAALRDALATPDPDPLPLFD
HHHHHHHHCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VLNRFRVLCATRTGARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHCCCCEEEECCCEEEEE
FNGDIGIALPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALV
EECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE
LPASFNRVLSRELVYTAITRARSRVRVIGARAVLALAIATRTARDSGLAARIADALRTR
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAA
CCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SRATAAGHVCVSLRALAQRYDEPFADVRDALAASGVTAFDSIARGAERPLVVDRDGRLYL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCEEE
ARYFEYETRLASALVARARCGGAQAGDAGELMPEALGERLVRYFGPQKERGVDWQRVAAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAG
HHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
SLPAELAARLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLD
CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
ALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSSATCATIARALGVGEAEFVAALPQ
HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEECCC
GGVLHAADAANAGASADARATSVDTGAAALAARATGAVAAAKVAPEAPAQRAPAPRAGRR
CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCHHCCCCCCCCCC
GGGRESKRGVDDAQGWLFAFEDEDAFSAEASGAGASGADESGAEALGVGTSGADAQDVGT
CCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCC
SSIDRRDDRASLDTPRRRRDALATHVRADSPGARDIENAAYVHAQADEAGVADLPWDASF
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
AEPAAWIEAGELEWLDNADFSISEGASANAGSDERRTATATDASAGGARAQAGRVPAAHA
CCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
GPDIEPQASAPANPAGAPSPDADAAAAPLTDCVIWLERNYRFGLDSPIGRLSLAIRRGAV
CCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH
QDALDALSTADDAAARWCDDGGATLSAATVGQLARGFAGYAAALRDALATPDPDPLPLFD
HHHHHHHHCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VLNRFRVLCATRTGARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHCCCCEEEECCCEEEEE
FNGDIGIALPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALV
EECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE
LPASFNRVLSRELVYTAITRARSRVRVIGARAVLALAIATRTARDSGLAARIADALRTR
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3537961; 9278503; 3537960 [H]