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The map label for this gene is ubiD [H]

Identifier: 83719856

GI number: 83719856

Start: 1726472

End: 1728082

Strand: Reverse

Name: ubiD [H]

Synonym: BTH_I1526

Alternate gene names: 83719856

Gene position: 1728082-1726472 (Counterclockwise)

Preceding gene: 83719500

Following gene: 83720962

Centisome position: 45.37

GC content: 67.85

Gene sequence:

>1611_bases
ATGCGCCGCCCCCATCGCCGCCGCCTGTCGCGCGCGGCCCGGACATCCTTCATGAAATACAAAGACTTACGCGATTTCAT
CCACAGCCTCGAGCAGCGCGGCGAATTGCGACGCATCACGCAGCCCGTGTCGCCCGCCCTCGAAATGACCGAACTCTGCG
ACCGCGTGCTGCGCGCGGGCGGTCCCGCACTGCTGTTCGATGCGCCGGACGGCTACCGGTTTCCGGTGCTCGGCAACCTG
TTCGGCACGCCGCGGCGCGTCGCGCTCGGGATGGGCGTCGACGCCGACGACAACGCGACGCTCGCGTCGCTGCGCGACAT
CGGCCGCCTGCTGTCCGCGCTCAAGGAGCCCGATCCGCCGAAGAGCCTGAAGGATGCCGGCAAGCTGCTATCGCTCGCGA
AGGCCGTGTGGGACATGGGCCCGAAGACGGTGTCCGCGCCGCCGTGCCAGGAGATCGTCTGGGAAGGCGACGACGTCGAT
CTGCACAAGCTGCCGATCCAGACCTGCTGGCCAGGCGACGCCGGGCCGCTGCTCACGTGGGGCCTGACCGTCACGCGCGG
ACCGAACAAGACGCGCCAGAATCTCGGCATCTACCGGCAGCAACTGATCGGACGCAACAAACTGATCATGCGCTGGCTCG
CGCATCGCGGCGGCGCACTCGACTTCCGCGAATTCGCGCTGAAGCATCCGGGCCAGCCCTATCCCGTCGCCGTCGTGCTC
GGCGCCGATCCGGCGACAGCGCTCGGCGCCGTCACGCCCGTGCCCGACACGCTGTCCGAATACCAGTTCGCGGGCCTGCT
GCGCGGCGCGCGCACCGAGCTCGCGAAATGCCTGACGCCCGGCGTCGACACGCTGCAGGTGCCGGCGCGCGCGGAAATCG
TGCTCGAAGGCTTCATTCACCCGCAGCAAGGCGCGCCCGCGCCGGCGCCCGAGGGCGCGCCGCCAAGGCCGACGGCGGGC
GCCGCAGCCGGCTACGAGCATGCGCTCGAAGGCCCGTACGGCGACCACACCGGCTACTACAACGAGCAAGAGTGGTTTCC
GGTCTTCACGGTCGAGCGGATCACGATGCGCCGCGACGCGATCTATCACTCGACGTACACCGGCAAGCCGCCCGACGAGC
CGGCGGTGCTCGGCGTCGCGCTGAACGAGGTGTTCGTGCCGCTGCTGCAGAAGCAGTTCTCCGAGATCACTGACTTCTAT
CTGCCGCCCGAGGGATGCAGCTACCGGATGGCGATCGTCCAGATGAAGAAGAGCTACGCGGGCCACGCGAAGCGCGTGAT
GTTCGGTGTCTGGAGCTTCCTGCGGCAGTTCATGTATACGAAGTTCATCGTCGTCGTCGACGAGGACGTGAACGTGCGCG
ACTGGAAGGAAGTGATCTGGGCGATCACGACACGCGTCGATCCCGCGCGCGACACGGTGCTCGTCGAGAACACGCCGATC
GACTACCTCGATTTCGCGTCGCCCGTCGCCGGCCTCGGCTCGAAGATGGGGCTCGACGCGACCAACAAGTGGCCGGGCGA
AACCCAGCGCGAATGGGGCCGGCCGATCGAGATGGACGCCGCCGTGAAAGCGCGCGTCGATCGTCTGTGGACCGAAATCG
GCCTGTCGTGA

Upstream 100 bases:

>100_bases
CCGCGTGCCGTCTAGCGTTCGGATCCGCCTCCATTTTTTACATTTTCATCGCCTGGCCGTCCGGCCGGGTAAAATCGGCG
CTCGCTTCCGGGCGTGCTCC

Downstream 100 bases:

>100_bases
ACGCGTGGGCGCCGAACATGTTCAACAACAACCGCACATGATGAGCTTCGCCCCCACGTCGATGTTGTCCGACGGCTTTT
TCCTGTCGCTTTCCCTGTGT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MRRPHRRRLSRAARTSFMKYKDLRDFIHSLEQRGELRRITQPVSPALEMTELCDRVLRAGGPALLFDAPDGYRFPVLGNL
FGTPRRVALGMGVDADDNATLASLRDIGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMGPKTVSAPPCQEIVWEGDDVD
LHKLPIQTCWPGDAGPLLTWGLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKHPGQPYPVAVVL
GADPATALGAVTPVPDTLSEYQFAGLLRGARTELAKCLTPGVDTLQVPARAEIVLEGFIHPQQGAPAPAPEGAPPRPTAG
AAAGYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFSEITDFY
LPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNVRDWKEVIWAITTRVDPARDTVLVENTPI
DYLDFASPVAGLGSKMGLDATNKWPGETQREWGRPIEMDAAVKARVDRLWTEIGLS

Sequences:

>Translated_536_residues
MRRPHRRRLSRAARTSFMKYKDLRDFIHSLEQRGELRRITQPVSPALEMTELCDRVLRAGGPALLFDAPDGYRFPVLGNL
FGTPRRVALGMGVDADDNATLASLRDIGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMGPKTVSAPPCQEIVWEGDDVD
LHKLPIQTCWPGDAGPLLTWGLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKHPGQPYPVAVVL
GADPATALGAVTPVPDTLSEYQFAGLLRGARTELAKCLTPGVDTLQVPARAEIVLEGFIHPQQGAPAPAPEGAPPRPTAG
AAAGYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFSEITDFY
LPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNVRDWKEVIWAITTRVDPARDTVLVENTPI
DYLDFASPVAGLGSKMGLDATNKWPGETQREWGRPIEMDAAVKARVDRLWTEIGLS
>Mature_536_residues
MRRPHRRRLSRAARTSFMKYKDLRDFIHSLEQRGELRRITQPVSPALEMTELCDRVLRAGGPALLFDAPDGYRFPVLGNL
FGTPRRVALGMGVDADDNATLASLRDIGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMGPKTVSAPPCQEIVWEGDDVD
LHKLPIQTCWPGDAGPLLTWGLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKHPGQPYPVAVVL
GADPATALGAVTPVPDTLSEYQFAGLLRGARTELAKCLTPGVDTLQVPARAEIVLEGFIHPQQGAPAPAPEGAPPRPTAG
AAAGYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFSEITDFY
LPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNVRDWKEVIWAITTRVDPARDTVLVENTPI
DYLDFASPVAGLGSKMGLDATNKWPGETQREWGRPIEMDAAVKARVDRLWTEIGLS

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=518, Percent_Identity=67.9536679536679, Blast_Score=724, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=469, Percent_Identity=23.0277185501066, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 59542; Mature: 59542

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPHRRRLSRAARTSFMKYKDLRDFIHSLEQRGELRRITQPVSPALEMTELCDRVLRAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCC
GPALLFDAPDGYRFPVLGNLFGTPRRVALGMGVDADDNATLASLRDIGRLLSALKEPDPP
CCEEEEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
KSLKDAGKLLSLAKAVWDMGPKTVSAPPCQEIVWEGDDVDLHKLPIQTCWPGDAGPLLTW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEE
GLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKHPGQPYPVAVVL
CEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEE
GADPATALGAVTPVPDTLSEYQFAGLLRGARTELAKCLTPGVDTLQVPARAEIVLEGFIH
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCC
PQQGAPAPAPEGAPPRPTAGAAAGYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
IYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFSEITDFYLPPEGCSYRMAIVQMKKSYA
HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
GHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNVRDWKEVIWAITTRVDPARDTVLVENTPI
CHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
DYLDFASPVAGLGSKMGLDATNKWPGETQREWGRPIEMDAAVKARVDRLWTEIGLS
CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRPHRRRLSRAARTSFMKYKDLRDFIHSLEQRGELRRITQPVSPALEMTELCDRVLRAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCC
GPALLFDAPDGYRFPVLGNLFGTPRRVALGMGVDADDNATLASLRDIGRLLSALKEPDPP
CCEEEEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
KSLKDAGKLLSLAKAVWDMGPKTVSAPPCQEIVWEGDDVDLHKLPIQTCWPGDAGPLLTW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEE
GLTVTRGPNKTRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKHPGQPYPVAVVL
CEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEE
GADPATALGAVTPVPDTLSEYQFAGLLRGARTELAKCLTPGVDTLQVPARAEIVLEGFIH
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHCCC
PQQGAPAPAPEGAPPRPTAGAAAGYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
IYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFSEITDFYLPPEGCSYRMAIVQMKKSYA
HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
GHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNVRDWKEVIWAITTRVDPARDTVLVENTPI
CHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
DYLDFASPVAGLGSKMGLDATNKWPGETQREWGRPIEMDAAVKARVDRLWTEIGLS
CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA