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The map label for this gene is yfdZ [C]

Identifier: 83719500

GI number: 83719500

Start: 1730273

End: 1731466

Strand: Reverse

Name: yfdZ [C]

Synonym: BTH_I1528

Alternate gene names: 83719500

Gene position: 1731466-1730273 (Counterclockwise)

Preceding gene: 83718415

Following gene: 83719856

Centisome position: 45.45

GC content: 68.26

Gene sequence:

>1194_bases
ATGAATACCGCTGCCGATTCGCTCCTGAGGCTCGCGTCGCGCGTCGACGCGATCGAGCCGTTCTACGTGATGGAAATCGT
CAAGGAAGCCGCCGTGCTCGAGCGCGCCGGCCGCGACATCATTCATATGAGCATCGGCGAGCCGGATTTCACGGCGCCGG
AGCCCGTCGTCGACGCGGCCGCCGCGGCGCTGCGCCGCGGCGTCACGCAATACACGAGCGCGCTCGGCATCGCGCCGCTG
CGCGAAGCGATCGCCGCGCACTATGCGCGCGCGTACGGGCTATCGATCGGGCCGGAGCGAATCGTCGTGACGGCGGGCGC
TTCGGCCGCACTGCTGCTCGCGTGCCTCGCGCTCGTCGGCCGTGACGACGAAGTGCTGATGCCAGACCCGTCGTATCCGT
GCAACCGCCACTTCGTCGCGACGGCCGAAGGCCGCGCGGTGCTCGTGCCGAGCGGCCCTGAAGCCCGCTTCCAACTGACC
GCCGACGACGTGAGAACGCGCTGGGGCGAGCGCACGCGCGGCGTGCTGCTCGCGTCGCCGTCGAACCCGACAGGCACGTC
GCTCGAGCCCGCCGAACTCGGCCGGATCATCGATGCCGTTCGCGCACGCGGCGGCTTCTCGATCGTCGACGAGATCTACC
AGGGCCTGAGCTACGACGGCGCGCCCGTGTCGGCGCTGTCGTTCGGCGACGATGTCGTCACCGTCAACAGCTTCTCGAAG
TACTTCAACATGACGGGCTGGCGGCTCGGCTGGCTCGTCGTGCCGCCGGCCCTCGTCGGCACGTTCGAAAAGCTCGCGCA
GAATCTGTTCATCTGCCCGTCCGCCCTCGCGCAACACGCGGCGCTCGCGTGCTTCGAGCCGCATACGCTCGCGATCTACG
AGGCGCGCCGCGCCGAATTCAAGCGTCGCCGCGATTTCATCGTGCCGGCGATCGAATCGCTCGGCTTCAAGGTGCCCGTG
ATGCCGGATGGCGCGTTCTATGTATACGCGCAATGCGGCGGCGTCGCGCATCCGGCGGCAGGAGACAGCGCCGCGCTCGT
GAACGCGATGCTGCACGATGCGGGCGTCGTGCTCGTGCCGGGGATGGATTTCGGCGTTCATGCGCCGCGCGACTATATTC
GACTGTCCTATGCGACCGCGTACTCGCGGCTCGAAGAGGCGGTCGAGCGTCTCGGCAAGCTGTTCGGCCGATAA

Upstream 100 bases:

>100_bases
GCGCCCGGCCGAGACGCAAGCGCGGCGCGGCGCGTAACCTCCGTTCGCGGGCGCGCGGCGCGCGCCCGCTTTTCGCCTTC
CCCACCGTTTTGATTCGACG

Downstream 100 bases:

>100_bases
ACGGCGGGCCGCCTCGGCGCCCGCCCGCGCGGCCTCCAACCGATGCGTTGGAGGCCGACGTTCGTTGCCGCCGATTTCGC
TCGTCGCGCCCCCACCTTGT

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNTAADSLLRLASRVDAIEPFYVMEIVKEAAVLERAGRDIIHMSIGEPDFTAPEPVVDAAAAALRRGVTQYTSALGIAPL
REAIAAHYARAYGLSIGPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVATAEGRAVLVPSGPEARFQLT
ADDVRTRWGERTRGVLLASPSNPTGTSLEPAELGRIIDAVRARGGFSIVDEIYQGLSYDGAPVSALSFGDDVVTVNSFSK
YFNMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPHTLAIYEARRAEFKRRRDFIVPAIESLGFKVPV
MPDGAFYVYAQCGGVAHPAAGDSAALVNAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRLEEAVERLGKLFGR

Sequences:

>Translated_397_residues
MNTAADSLLRLASRVDAIEPFYVMEIVKEAAVLERAGRDIIHMSIGEPDFTAPEPVVDAAAAALRRGVTQYTSALGIAPL
REAIAAHYARAYGLSIGPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVATAEGRAVLVPSGPEARFQLT
ADDVRTRWGERTRGVLLASPSNPTGTSLEPAELGRIIDAVRARGGFSIVDEIYQGLSYDGAPVSALSFGDDVVTVNSFSK
YFNMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPHTLAIYEARRAEFKRRRDFIVPAIESLGFKVPV
MPDGAFYVYAQCGGVAHPAAGDSAALVNAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRLEEAVERLGKLFGR
>Mature_397_residues
MNTAADSLLRLASRVDAIEPFYVMEIVKEAAVLERAGRDIIHMSIGEPDFTAPEPVVDAAAAALRRGVTQYTSALGIAPL
REAIAAHYARAYGLSIGPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVATAEGRAVLVPSGPEARFQLT
ADDVRTRWGERTRGVLLASPSNPTGTSLEPAELGRIIDAVRARGGFSIVDEIYQGLSYDGAPVSALSFGDDVVTVNSFSK
YFNMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPHTLAIYEARRAEFKRRRDFIVPAIESLGFKVPV
MPDGAFYVYAQCGGVAHPAAGDSAALVNAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRLEEAVERLGKLFGR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=418, Percent_Identity=26.7942583732057, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI169881279, Length=418, Percent_Identity=26.7942583732057, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI56713256, Length=342, Percent_Identity=26.6081871345029, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI56713254, Length=355, Percent_Identity=26.4788732394366, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI169881281, Length=302, Percent_Identity=24.1721854304636, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4507369, Length=388, Percent_Identity=23.1958762886598, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1788722, Length=396, Percent_Identity=29.2929292929293, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786816, Length=371, Percent_Identity=29.3800539083558, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1788627, Length=391, Percent_Identity=26.0869565217391, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787710, Length=337, Percent_Identity=24.6290801186944, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994472, Length=391, Percent_Identity=25.8312020460358, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71994476, Length=391, Percent_Identity=25.8312020460358, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17567369, Length=318, Percent_Identity=24.5283018867925, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17567663, Length=398, Percent_Identity=24.8743718592965, Blast_Score=98, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6322401, Length=394, Percent_Identity=24.1116751269036, Blast_Score=106, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28573069, Length=389, Percent_Identity=26.2210796915167, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24646114, Length=389, Percent_Identity=26.2210796915167, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI28573067, Length=389, Percent_Identity=26.2210796915167, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI28573065, Length=389, Percent_Identity=26.2210796915167, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI18859735, Length=400, Percent_Identity=24.5, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42619; Mature: 42619

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAADSLLRLASRVDAIEPFYVMEIVKEAAVLERAGRDIIHMSIGEPDFTAPEPVVDAA
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH
AAALRRGVTQYTSALGIAPLREAIAAHYARAYGLSIGPERIVVTAGASAALLLACLALVG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHC
RDDEVLMPDPSYPCNRHFVATAEGRAVLVPSGPEARFQLTADDVRTRWGERTRGVLLASP
CCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCCEEEECC
SNPTGTSLEPAELGRIIDAVRARGGFSIVDEIYQGLSYDGAPVSALSFGDDVVTVNSFSK
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEHHHHHH
YFNMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPHTLAIYEARRAEF
HHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEHHHHHHHH
KRRRDFIVPAIESLGFKVPVMPDGAFYVYAQCGGVAHPAAGDSAALVNAMLHDAGVVLVP
HHHHCHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEC
GMDFGVHAPRDYIRLSYATAYSRLEEAVERLGKLFGR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTAADSLLRLASRVDAIEPFYVMEIVKEAAVLERAGRDIIHMSIGEPDFTAPEPVVDAA
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH
AAALRRGVTQYTSALGIAPLREAIAAHYARAYGLSIGPERIVVTAGASAALLLACLALVG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHC
RDDEVLMPDPSYPCNRHFVATAEGRAVLVPSGPEARFQLTADDVRTRWGERTRGVLLASP
CCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCCEEEECC
SNPTGTSLEPAELGRIIDAVRARGGFSIVDEIYQGLSYDGAPVSALSFGDDVVTVNSFSK
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEHHHHHH
YFNMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPHTLAIYEARRAEF
HHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEHHHHHHHH
KRRRDFIVPAIESLGFKVPVMPDGAFYVYAQCGGVAHPAAGDSAALVNAMLHDAGVVLVP
HHHHCHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEC
GMDFGVHAPRDYIRLSYATAYSRLEEAVERLGKLFGR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]