| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is yicG [C]
Identifier: 83719827
GI number: 83719827
Start: 1759023
End: 1759643
Strand: Reverse
Name: yicG [C]
Synonym: BTH_I1558
Alternate gene names: 83719827
Gene position: 1759643-1759023 (Counterclockwise)
Preceding gene: 83719163
Following gene: 83720655
Centisome position: 46.19
GC content: 66.18
Gene sequence:
>621_bases GTGCATCCGAGACTCACACTCGCGATCGCGGTCCTCGAGGCAATCGCGACGCTCGCGTTCGCGATCTCGGGTTTCGTCGA AGCGCGCAAGAACCGGCTCGATTCGGTCGGCATGTTCGTCGTCGCGCTCGCGACCGCGTTCGGTGGCGGCACGATGCGCG ACGTGCTGCTCGAGCGGCGTCCGTTCTACTGGGTCGAGCACCAGGGCTACGTGATTGCGATCTTCGGCCTGTCGCTCGTC GCGCCGCTCGTGCTCCGGATGGCGTCGCGGCTTTCGGCCGAACGGCTGCTGCTCGCAGCCGATGCGATCGGCCTCGGGAT CTTCAGCATCTCCGGCACGTCGATCGCGCTCGACGCGCAAATGCCGTGGTTCGTCGCCGCGATGATGGGCGTGACGACGG GCGTGTTCGGCGGAATCATCCGCGACGTGCTGTGCAACGACATCCCGCTGATCCTGCGCGACTCGCGACCGTACGCGACC TGCGCGTTCGCCGGCTGCTGGGTCTATCTGCTGCTCGTGTGGCTGCAATTCGATTCCGTCTACAGCGTGCTCGCGGCGAC GGGTTTCATCCTCGTCACGCGGCTCGTCACGTACAAGCTCGACATCCGGCTGCCGCACTAG
Upstream 100 bases:
>100_bases GTGATCGCGTTCTGCCAGGCGCGCGGCCACGACGGCGGCGCGGGCGCCGTGCTCGTGCTGCTGCAGCCGTCCTAGACGAA CGACGGCGACGGGAAGCCGC
Downstream 100 bases:
>100_bases GCGCTGTTCACGCTCATGACGGGCTGGCGCGGGCTGCGCATCGCTCGCGACATGAAAAAGGGCGGCCCGCGCAAGCGCGG CCGCCCTTCTCTCTTTTCCT
Product: yadS protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MHPRLTLAIAVLEAIATLAFAISGFVEARKNRLDSVGMFVVALATAFGGGTMRDVLLERRPFYWVEHQGYVIAIFGLSLV APLVLRMASRLSAERLLLAADAIGLGIFSISGTSIALDAQMPWFVAAMMGVTTGVFGGIIRDVLCNDIPLILRDSRPYAT CAFAGCWVYLLLVWLQFDSVYSVLAATGFILVTRLVTYKLDIRLPH
Sequences:
>Translated_206_residues MHPRLTLAIAVLEAIATLAFAISGFVEARKNRLDSVGMFVVALATAFGGGTMRDVLLERRPFYWVEHQGYVIAIFGLSLV APLVLRMASRLSAERLLLAADAIGLGIFSISGTSIALDAQMPWFVAAMMGVTTGVFGGIIRDVLCNDIPLILRDSRPYAT CAFAGCWVYLLLVWLQFDSVYSVLAATGFILVTRLVTYKLDIRLPH >Mature_206_residues MHPRLTLAIAVLEAIATLAFAISGFVEARKNRLDSVGMFVVALATAFGGGTMRDVLLERRPFYWVEHQGYVIAIFGLSLV APLVLRMASRLSAERLLLAADAIGLGIFSISGTSIALDAQMPWFVAAMMGVTTGVFGGIIRDVLCNDIPLILRDSRPYAT CAFAGCWVYLLLVWLQFDSVYSVLAATGFILVTRLVTYKLDIRLPH
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=162, Percent_Identity=37.6543209876543, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI1786352, Length=196, Percent_Identity=35.7142857142857, Blast_Score=84, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22470; Mature: 22470
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPRLTLAIAVLEAIATLAFAISGFVEARKNRLDSVGMFVVALATAFGGGTMRDVLLERR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PFYWVEHQGYVIAIFGLSLVAPLVLRMASRLSAERLLLAADAIGLGIFSISGTSIALDAQ CCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECC MPWFVAAMMGVTTGVFGGIIRDVLCNDIPLILRDSRPYATCAFAGCWVYLLLVWLQFDSV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH YSVLAATGFILVTRLVTYKLDIRLPH HHHHHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure MHPRLTLAIAVLEAIATLAFAISGFVEARKNRLDSVGMFVVALATAFGGGTMRDVLLERR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PFYWVEHQGYVIAIFGLSLVAPLVLRMASRLSAERLLLAADAIGLGIFSISGTSIALDAQ CCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECC MPWFVAAMMGVTTGVFGGIIRDVLCNDIPLILRDSRPYATCAFAGCWVYLLLVWLQFDSV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH YSVLAATGFILVTRLVTYKLDIRLPH HHHHHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]