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The map label for this gene is yfcN [C]

Identifier: 83719163

GI number: 83719163

Start: 1759669

End: 1760412

Strand: Reverse

Name: yfcN [C]

Synonym: BTH_I1559

Alternate gene names: 83719163

Gene position: 1760412-1759669 (Counterclockwise)

Preceding gene: 83720928

Following gene: 83719827

Centisome position: 46.21

GC content: 74.46

Gene sequence:

>744_bases
ATGGCGAAGAACCAGCCTCACCCGAGCGACCCCGCGAAGCGGCAAGCCGCCGCCCGCGCAGCCGAACCGGCGCCCGCGCC
CGCGAGCCCGCCCCCCGCGCCCGCCGCGCTGCGCGGCCAGGGCCTCGCCGGGCTCGGCTCGCTGCGCGCCGCGCTCGCCG
GCGAATCCGAGCGCCGCGCGCGCGAAGCGACGCAGGCGCAGCAGTCGGCCCGCCAGGCCTCGGCCGACGCCGACCTGTTC
CGCCGCGAGATCGGCGAGATCAAGCCGCTCGCCGCGCCGCCGCGCGCCGCGAGCGGCCGCCTCGCGCCCGCGCCCGTGCC
GAAGCACACGCGGCAGGACGAGGAGGCGGTGCTCTCCGAGACCTTGTCCGACGAATTCGATCCGGAAACGCTGCTCGATA
CCGACGAGACGCTGTACTACCACCGCCCCGGCGTGAGCCGCGACGTCGTGCGCAAGCTCAGAAGCGGCGCGTGGATCGTC
CAGGCGCAACTCGACCTGCACGGAATGCGGCGCGACGAGGCGCGCGAGGCGCTCGCCGAATTCATCCGCGAATCGGGCAA
GAAAGGCCTGCGCTGCCTGCGCGTGATTCACGGCAAGGGGCTCGGCTCGATCGGCAAGGAACCGGTGCTCAAGGGCAAGG
TGCGCGCGTGGCTCGTGCAGAAGGACGAGGTGATCGCGTTCTGCCAGGCGCGCGGCCACGACGGCGGCGCGGGCGCCGTG
CTCGTGCTGCTGCAGCCGTCCTAG

Upstream 100 bases:

>100_bases
GCAGCCGCTGCGCATCGCGCAGCGGCTTTTTCATGCCCGCCGGCCCGAACCGCCGCACGCCGCGCCCGCCCCTCGGGGTA
TCCGATCGTATCGATTCATC

Downstream 100 bases:

>100_bases
ACGAACGACGGCGACGGGAAGCCGCGTGCATCCGAGACTCACACTCGCGATCGCGGTCCTCGAGGCAATCGCGACGCTCG
CGTTCGCGATCTCGGGTTTC

Product: Smr domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAKNQPHPSDPAKRQAAARAAEPAPAPASPPPAPAALRGQGLAGLGSLRAALAGESERRAREATQAQQSARQASADADLF
RREIGEIKPLAAPPRAASGRLAPAPVPKHTRQDEEAVLSETLSDEFDPETLLDTDETLYYHRPGVSRDVVRKLRSGAWIV
QAQLDLHGMRRDEAREALAEFIRESGKKGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKDEVIAFCQARGHDGGAGAV
LVLLQPS

Sequences:

>Translated_247_residues
MAKNQPHPSDPAKRQAAARAAEPAPAPASPPPAPAALRGQGLAGLGSLRAALAGESERRAREATQAQQSARQASADADLF
RREIGEIKPLAAPPRAASGRLAPAPVPKHTRQDEEAVLSETLSDEFDPETLLDTDETLYYHRPGVSRDVVRKLRSGAWIV
QAQLDLHGMRRDEAREALAEFIRESGKKGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKDEVIAFCQARGHDGGAGAV
LVLLQPS
>Mature_246_residues
AKNQPHPSDPAKRQAAARAAEPAPAPASPPPAPAALRGQGLAGLGSLRAALAGESERRAREATQAQQSARQASADADLFR
REIGEIKPLAAPPRAASGRLAPAPVPKHTRQDEEAVLSETLSDEFDPETLLDTDETLYYHRPGVSRDVVRKLRSGAWIVQ
AQLDLHGMRRDEAREALAEFIRESGKKGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKDEVIAFCQARGHDGGAGAVL
VLLQPS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=176, Percent_Identity=32.3863636363636, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787602, Length=176, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 26430; Mature: 26299

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNQPHPSDPAKRQAAARAAEPAPAPASPPPAPAALRGQGLAGLGSLRAALAGESERRA
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHH
REATQAQQSARQASADADLFRREIGEIKPLAAPPRAASGRLAPAPVPKHTRQDEEAVLSE
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
TLSDEFDPETLLDTDETLYYHRPGVSRDVVRKLRSGAWIVQAQLDLHGMRRDEAREALAE
HHHCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHCCCHHHHHHHHHH
FIRESGKKGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKDEVIAFCQARGHDGGAGAV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCHHHHHHHHCCCCCCCCEE
LVLLQPS
EEEECCC
>Mature Secondary Structure 
AKNQPHPSDPAKRQAAARAAEPAPAPASPPPAPAALRGQGLAGLGSLRAALAGESERRA
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCHHHHH
REATQAQQSARQASADADLFRREIGEIKPLAAPPRAASGRLAPAPVPKHTRQDEEAVLSE
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
TLSDEFDPETLLDTDETLYYHRPGVSRDVVRKLRSGAWIVQAQLDLHGMRRDEAREALAE
HHHCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCHHCCCHHHHHHHHHH
FIRESGKKGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKDEVIAFCQARGHDGGAGAV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCHHHHHHHHCCCCCCCCEE
LVLLQPS
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA