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The map label for this gene is yebA [C]

Identifier: 83719735

GI number: 83719735

Start: 2801532

End: 2803031

Strand: Direct

Name: yebA [C]

Synonym: BTH_I2447

Alternate gene names: 83719735

Gene position: 2801532-2803031 (Clockwise)

Preceding gene: 83719767

Following gene: 83719273

Centisome position: 73.55

GC content: 72.73

Gene sequence:

>1500_bases
ATGCGCTGCCGGCCCGCCCCGACGCGGGTTCTGACGCAGTCGCCGCCCACACCTTTTTCGTTCGAACCGCTTTTTTCAAG
GATGTGGACACCCTTGGCCAAGCCAACCGCACAACCCGTTTCCGCTTCTTCCTCCGCTTCCCCCTTTCGCGCCGATCCCG
CGCCCGTCGCCCGGTCGGCGGCTCGCTCCGCGCCCCCTCGTTCGTTCACACGCAAGCTGCCCGCGGCGGGCGCGCTCGGC
GCGCTGATCGCGTGCAGCCTAGCGGCGCTGCCGGCCGTGTCGAAGTCGCCCGATGCGTCGAGCACGAACGCCGCGCGCGC
GCCGCAGCGCGTGTTCGCCGACGCGCCGTTCCCGAGCGCGCAACGCTTCGTCACGGGCGAGCTCGAGCGCATGATCGCCG
ATCAGAACCCGCCCGCCGCGCCGCTGCGAACGCTCGCCGCGCGAGCCGCCTCGCCGGCCGCGGGCCCGGCGCTCGGCAAC
GCTCAGGCCGACGTCGCGCAGCCCGGGCCGGCGCGGCCCGGACTCTTCGCGCCGCTCGCCGAGCACCGCAACGAACTGCT
CGGCTACGACGGCCGCGCGTTCTCGCTCGCCGATTCGGTGCTCGCGCTCGCGAGCAGCGGCGTGCGCGCCGGGCCGATCG
ACGACACGCTCGCCGACACGCTGAACCGGATCGACATTCCGCCCGAGGTGCGCATCCAGATCGGCGATCTGATCGCCGAC
CGCGTGCAGTCGCACGCGAGCGCGCGGCAGGGCGACCGCTACCGGATCGCGTTCGACGCCGCGTCGGGCAAGCCGCGCGT
GACCGCGCTCGAGCTGCGCGTCGCGGGCCGCCGGTTCGGCGCCGTCTGGTTCAAGCCGCCGGGCGCGGCGAGCGGCGCGT
ACTACGCGTTCGACGGCGAACCGCTCGACGCGCCCGCGCTCACGATGCCCGTCGTCAGCACGCGCATCAGCTCGTACTTC
GGCGAACGCGTGCATCCGCTGTCGCACATCCTGCAGATGCATACGGGCGTCGATCTGGCCGCGCCGAGCGGCACGCGCGT
GAATGCGGCGGCGGCGGGCGTCGTGTCGTTCGTCGGCTACGATCCGGGCGGCTACGGCAAGTATGTCGTCATCGACCATC
CGGACCGCCGGTCGACCTACTACGCGCATCTGTCGGCGTTCGCGCCGGGGCTCGACATCGGGATGACGGTCGCGCAGGGA
CAGCGGATCGGCGCGGTCGGCTCGACGGGCGCGGCGACAGGGCCGCATCTGCATTTCGAGGTGCGCGTCGACGATCAGCC
GGTCGACCCGCTCGTCGCGCTCGCCGACGCGCAAAACACGCTGTCGGCGATGCAGCTCGACGCGTTCAGGCGCGCCGCGA
GCGAAGCGCGCTTCCGGCTCGCGTCGGGCAGCGCGCGCCCGCTCGGCTTCGCGCAGGTCAGCGCGCCGCTGTGGGCCGAG
TTCGCGACCGATACGTCGACGCTGCGCGCGATCTTCAACACGCATTACGCGTCGTCGTGA

Upstream 100 bases:

>100_bases
GAATTGCCGCTCGGAGCGGACGTGGTCCGCGTCGTTGGGCCGAGCGGCGCGCAGCGGGGCGCGGTCCGTTCACGGTCGCG
CCCCGCCGCGTTGAACGCCC

Downstream 100 bases:

>100_bases
CGGCGCGGTAGCGCATTGCATGCCGCGTGCGCCGGCGCGCGGCGAACGCCCGCATCCGTCGCGCCGCCCGAGACGGGAAT
GCGCCCCTGCCCTTCGACGC

Product: M23/M37 familypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MRCRPAPTRVLTQSPPTPFSFEPLFSRMWTPLAKPTAQPVSASSSASPFRADPAPVARSAARSAPPRSFTRKLPAAGALG
ALIACSLAALPAVSKSPDASSTNAARAPQRVFADAPFPSAQRFVTGELERMIADQNPPAAPLRTLAARAASPAAGPALGN
AQADVAQPGPARPGLFAPLAEHRNELLGYDGRAFSLADSVLALASSGVRAGPIDDTLADTLNRIDIPPEVRIQIGDLIAD
RVQSHASARQGDRYRIAFDAASGKPRVTALELRVAGRRFGAVWFKPPGAASGAYYAFDGEPLDAPALTMPVVSTRISSYF
GERVHPLSHILQMHTGVDLAAPSGTRVNAAAAGVVSFVGYDPGGYGKYVVIDHPDRRSTYYAHLSAFAPGLDIGMTVAQG
QRIGAVGSTGAATGPHLHFEVRVDDQPVDPLVALADAQNTLSAMQLDAFRRAASEARFRLASGSARPLGFAQVSAPLWAE
FATDTSTLRAIFNTHYASS

Sequences:

>Translated_499_residues
MRCRPAPTRVLTQSPPTPFSFEPLFSRMWTPLAKPTAQPVSASSSASPFRADPAPVARSAARSAPPRSFTRKLPAAGALG
ALIACSLAALPAVSKSPDASSTNAARAPQRVFADAPFPSAQRFVTGELERMIADQNPPAAPLRTLAARAASPAAGPALGN
AQADVAQPGPARPGLFAPLAEHRNELLGYDGRAFSLADSVLALASSGVRAGPIDDTLADTLNRIDIPPEVRIQIGDLIAD
RVQSHASARQGDRYRIAFDAASGKPRVTALELRVAGRRFGAVWFKPPGAASGAYYAFDGEPLDAPALTMPVVSTRISSYF
GERVHPLSHILQMHTGVDLAAPSGTRVNAAAAGVVSFVGYDPGGYGKYVVIDHPDRRSTYYAHLSAFAPGLDIGMTVAQG
QRIGAVGSTGAATGPHLHFEVRVDDQPVDPLVALADAQNTLSAMQLDAFRRAASEARFRLASGSARPLGFAQVSAPLWAE
FATDTSTLRAIFNTHYASS
>Mature_499_residues
MRCRPAPTRVLTQSPPTPFSFEPLFSRMWTPLAKPTAQPVSASSSASPFRADPAPVARSAARSAPPRSFTRKLPAAGALG
ALIACSLAALPAVSKSPDASSTNAARAPQRVFADAPFPSAQRFVTGELERMIADQNPPAAPLRTLAARAASPAAGPALGN
AQADVAQPGPARPGLFAPLAEHRNELLGYDGRAFSLADSVLALASSGVRAGPIDDTLADTLNRIDIPPEVRIQIGDLIAD
RVQSHASARQGDRYRIAFDAASGKPRVTALELRVAGRRFGAVWFKPPGAASGAYYAFDGEPLDAPALTMPVVSTRISSYF
GERVHPLSHILQMHTGVDLAAPSGTRVNAAAAGVVSFVGYDPGGYGKYVVIDHPDRRSTYYAHLSAFAPGLDIGMTVAQG
QRIGAVGSTGAATGPHLHFEVRVDDQPVDPLVALADAQNTLSAMQLDAFRRAASEARFRLASGSARPLGFAQVSAPLWAE
FATDTSTLRAIFNTHYASS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=192, Percent_Identity=33.8541666666667, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI87082174, Length=111, Percent_Identity=37.8378378378378, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 52268; Mature: 52268

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCRPAPTRVLTQSPPTPFSFEPLFSRMWTPLAKPTAQPVSASSSASPFRADPAPVARSA
CCCCCCCCCEECCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ARSAPPRSFTRKLPAAGALGALIACSLAALPAVSKSPDASSTNAARAPQRVFADAPFPSA
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCH
QRFVTGELERMIADQNPPAAPLRTLAARAASPAAGPALGNAQADVAQPGPARPGLFAPLA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EHRNELLGYDGRAFSLADSVLALASSGVRAGPIDDTLADTLNRIDIPPEVRIQIGDLIAD
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHH
RVQSHASARQGDRYRIAFDAASGKPRVTALELRVAGRRFGAVWFKPPGAASGAYYAFDGE
HHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCC
PLDAPALTMPVVSTRISSYFGERVHPLSHILQMHTGVDLAAPSGTRVNAAAAGVVSFVGY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHCCC
DPGGYGKYVVIDHPDRRSTYYAHLSAFAPGLDIGMTVAQGQRIGAVGSTGAATGPHLHFE
CCCCCCCEEEEECCCCCCCCEEEHHHHCCCCCCCEEECCCCEECCCCCCCCCCCCEEEEE
VRVDDQPVDPLVALADAQNTLSAMQLDAFRRAASEARFRLASGSARPLGFAQVSAPLWAE
EEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCHHHH
FATDTSTLRAIFNTHYASS
HHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRCRPAPTRVLTQSPPTPFSFEPLFSRMWTPLAKPTAQPVSASSSASPFRADPAPVARSA
CCCCCCCCCEECCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ARSAPPRSFTRKLPAAGALGALIACSLAALPAVSKSPDASSTNAARAPQRVFADAPFPSA
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCH
QRFVTGELERMIADQNPPAAPLRTLAARAASPAAGPALGNAQADVAQPGPARPGLFAPLA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EHRNELLGYDGRAFSLADSVLALASSGVRAGPIDDTLADTLNRIDIPPEVRIQIGDLIAD
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHH
RVQSHASARQGDRYRIAFDAASGKPRVTALELRVAGRRFGAVWFKPPGAASGAYYAFDGE
HHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCC
PLDAPALTMPVVSTRISSYFGERVHPLSHILQMHTGVDLAAPSGTRVNAAAAGVVSFVGY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHCCC
DPGGYGKYVVIDHPDRRSTYYAHLSAFAPGLDIGMTVAQGQRIGAVGSTGAATGPHLHFE
CCCCCCCEEEEECCCCCCCCEEEHHHHCCCCCCCEEECCCCEECCCCCCCCCCCCEEEEE
VRVDDQPVDPLVALADAQNTLSAMQLDAFRRAASEARFRLASGSARPLGFAQVSAPLWAE
EEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCHHHH
FATDTSTLRAIFNTHYASS
HHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]