| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is braD [H]
Identifier: 83719719
GI number: 83719719
Start: 902288
End: 903238
Strand: Direct
Name: braD [H]
Synonym: BTH_I0785
Alternate gene names: 83719719
Gene position: 902288-903238 (Clockwise)
Preceding gene: 83720418
Following gene: 83718822
Centisome position: 23.69
GC content: 64.46
Gene sequence:
>951_bases ATGGATATTTTCGTCCAGCAGATCCTCAACGGACTGGTGCTCGGCAGTGTCTACGCCATCATCGCGTTGGGCTATACGAT GGTGTACGGCATTCTCGGTATCATCAACTTCGCGCACGGCGACGTGCTGATGGTGGGCGCGATGGTCGCGCTTTCCGCGA TCACGGTGCTGCAGAACCACTTTCCGGAGCTCGGCCACGTCGCCACGCTGACGATCGGGCTCGTGATCGCCGCGGTGGTC TGCGCATGCGTCGGCTTCACGATCGAGCGCGTCGCGTACCGGCCGCTGCGCCGTGCGCCGCGCCTCGCGCCGCTCATCAC CGCGATCGGCGTGTCGATCCTGCTGCAGACGGCCGCGATGATGATCTGGTCGCGCAATCCGCTGCCGTTCCCGCAGCTTT TGCCCACTGATCCGATCAACGTGATCCAGGCGGGCGCGAATAATCCGGGCGCGGTGATTTCGATGACCGAGATCACGATC ATCATCGTCGCGTTCCTCGTGATGGCGGGGCTGCTCCTCCTCGTGCACAAGACGAAGCTCGGCCGTGCGATGCGCGCGAT CGCCGAGAACCCGAACACGGCGAGCCTGATGGGCGTGAACCCGAACTTCGTGATCTCCGCGACGTTCATGATCGGCTCCG CGCTCGCGGCGCTCGCGGGCGTGATGATCGCTTCCGAATACGGCAACGTTCACTTCTACATGGGTTTCATCCCCGGCATG AAGGCGTTCACGGCCGCGGTGCTGGGCGGGATCGGCAACCTCGGCGGCGCGATGGTGGGCGGCGTGCTGCTCGGCCTCAT CGAGCAGCTGGGCGCGGGCTATATCGGCAACCTGACGGGCGGGGTGTTCGGCAGCAATTACCAGGACGTGTTCGCGTTCA TCGTGCTCATCATCGTGCTCGTGTTCCGGCCGTCGGGCCTGTTGGGCGAACGTGTCGCCGATCGCGCGTAA
Upstream 100 bases:
>100_bases TATTGATTCAAGTACCCGCAGTGTCGTTGAGATCGCGCGATTCCATCGCTTATCCGCATGGCTGAGCGCGCATCCAGCAG CACGGGCCAAGGAGCTTTAA
Downstream 100 bases:
>100_bases GGAGAACAACATGACATCCATTCAACCGATCGAAACGTCGGCTTCGCTCGTCGAGGAGCGCCATCCGGCGAAGACCGCCA CCATCAGCATCCTGATCGCG
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MDIFVQQILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHVATLTIGLVIAAVV CACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNPLPFPQLLPTDPINVIQAGANNPGAVISMTEITI IIVAFLVMAGLLLLVHKTKLGRAMRAIAENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYMGFIPGM KAFTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFGSNYQDVFAFIVLIIVLVFRPSGLLGERVADRA
Sequences:
>Translated_316_residues MDIFVQQILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHVATLTIGLVIAAVV CACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNPLPFPQLLPTDPINVIQAGANNPGAVISMTEITI IIVAFLVMAGLLLLVHKTKLGRAMRAIAENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYMGFIPGM KAFTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFGSNYQDVFAFIVLIIVLVFRPSGLLGERVADRA >Mature_316_residues MDIFVQQILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNHFPELGHVATLTIGLVIAAVV CACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAMMIWSRNPLPFPQLLPTDPINVIQAGANNPGAVISMTEITI IIVAFLVMAGLLLLVHKTKLGRAMRAIAENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYMGFIPGM KAFTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFGSNYQDVFAFIVLIIVLVFRPSGLLGERVADRA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=312, Percent_Identity=43.5897435897436, Blast_Score=226, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 33032; Mature: 33032
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFVQQILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC FPELGHVATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH MIWSRNPLPFPQLLPTDPINVIQAGANNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKL HHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH GRAMRAIAENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYMGFIPGM HHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCH KAFTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFGSNYQDVFAFIVLIIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VFRPSGLLGERVADRA HHCCCCHHHHHHHCCC >Mature Secondary Structure MDIFVQQILNGLVLGSVYAIIALGYTMVYGILGIINFAHGDVLMVGAMVALSAITVLQNH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC FPELGHVATLTIGLVIAAVVCACVGFTIERVAYRPLRRAPRLAPLITAIGVSILLQTAAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH MIWSRNPLPFPQLLPTDPINVIQAGANNPGAVISMTEITIIIVAFLVMAGLLLLVHKTKL HHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH GRAMRAIAENPNTASLMGVNPNFVISATFMIGSALAALAGVMIASEYGNVHFYMGFIPGM HHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCH KAFTAAVLGGIGNLGGAMVGGVLLGLIEQLGAGYIGNLTGGVFGSNYQDVFAFIVLIIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VFRPSGLLGERVADRA HHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]