| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is braE [H]
Identifier: 83718822
GI number: 83718822
Start: 903249
End: 904418
Strand: Direct
Name: braE [H]
Synonym: BTH_I0786
Alternate gene names: 83718822
Gene position: 903249-904418 (Clockwise)
Preceding gene: 83719719
Following gene: 83721605
Centisome position: 23.71
GC content: 65.98
Gene sequence:
>1170_bases ATGACATCCATTCAACCGATCGAAACGTCGGCTTCGCTCGTCGAGGAGCGCCATCCGGCGAAGACCGCCACCATCAGCAT CCTGATCGCGGCGTTCGTGATCGCCGCGCCGCTCGTCATCGGCGCGGCGGGCGGCAACTACTGGGTCCGCGTGCTCGACT TCGCGATGCTGTACGTGATGCTCGCGCTGGGCTTGAACGTGGTCGTCGGCTTCGCCGGCCTGCTGGACCTCGGCTACATC GCGTTCTACGCGGTGGGCGCGTACACCGCGGCGCTCCTGAGCTCGCCGCACCTGACGTCGAACTTCGACTGGATCGCGCA CGCGTTTCCAGCCGGCCTGCACGTGCCGTTCTTCCTGATCGTGCCGATCGCGATGGCGCTCGCCGCGGTCTTCGGCATCC TGCTCGGCGCGCCGACGCTGCGCCTGCGCGGCGACTACCTCGCGATCGTCACGCTCGGCTTCGGCGAGATCGTCCGAATC TTCATGAACAACCTCGACCGTCCGGTCAACGTGACGAACGGGCCGCAGGGCATCACCGGCATCGATCCCGTCACGATCGC GGGGTTCAACCTGTCGCAGACGCACCAGATCTTCGGATTTTCGCTGCCGTCGGTGTACATGTACTACTACCTGTTCGTGC TTTGCGCGCTGCTCGTCATCTGGGTCTGCACGCGCCTGCAGCACTCGCGGATCGGCCGCGCATGGGCCGCGATCCGCGAA GATGAAATCGCCGCCAAGGCGATGGGCATCAACACCCGCAACGTGAAGCTGCTCGCGTTCGCGATGGGCGCGTCGTTCGG CGGCCTGTCGGGCGCGATGTTCGGCGCGTTCCAGGGCTTCGTGTCGCCGGAATCGTTCACGTTCTGGGAGTCGGTCGTCG TGCTCGCGTGCGTCGTGCTGGGCGGCATGGGCCACATCCCGGGCGTGATCCTCGGCGCGGTCCTGCTCGCCGTGTTCCCC GAGTTCCTGCGCTCGACGATGAGCCCGCTGCAGCACATGCTGTTCGGCCACGACATCGTCGATACCGAGGTGATTCGCCA GGCCCTTTACGGCCTCGCGATGGTGGTCATCATGCTGTATCGCTCGGAAGGCCTGTGGCCCGCGCCGAAGCATGAGGACA GGATCGCGAAACTGGCGAAGCGCGGCGGCAAGAAGCCGGTGCGCGCGTAA
Upstream 100 bases:
>100_bases CAGGACGTGTTCGCGTTCATCGTGCTCATCATCGTGCTCGTGTTCCGGCCGTCGGGCCTGTTGGGCGAACGTGTCGCCGA TCGCGCGTAAGGAGAACAAC
Downstream 100 bases:
>100_bases AGGACGTGGGACCGGCGCCCAGCGCCAGCGCGCGAGCGCCGGTCGACACAGGAGAAAAGGTAATGAGCGAACAAATTCGA CTGTCCGTCAAAGGCGTGAA
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTSIQPIETSASLVEERHPAKTATISILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLIVPIAMALAAVFGILLGAPTLRLRGDYLAIVTLGFGEIVRI FMNNLDRPVNVTNGPQGITGIDPVTIAGFNLSQTHQIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFP EFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDRIAKLAKRGGKKPVRA
Sequences:
>Translated_389_residues MTSIQPIETSASLVEERHPAKTATISILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLIVPIAMALAAVFGILLGAPTLRLRGDYLAIVTLGFGEIVRI FMNNLDRPVNVTNGPQGITGIDPVTIAGFNLSQTHQIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFP EFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDRIAKLAKRGGKKPVRA >Mature_388_residues TSIQPIETSASLVEERHPAKTATISILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA FYAVGAYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLIVPIAMALAAVFGILLGAPTLRLRGDYLAIVTLGFGEIVRIF MNNLDRPVNVTNGPQGITGIDPVTIAGFNLSQTHQIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRED EIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVLGGMGHIPGVILGAVLLAVFPE FLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLYRSEGLWPAPKHEDRIAKLAKRGGKKPVRA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=346, Percent_Identity=43.3526011560694, Blast_Score=217, Evalue=8e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 41960; Mature: 41829
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIQPIETSASLVEERHPAKTATISILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVM CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHH VPIAMALAAVFGILLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPVTIAGFNLSQTHQIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE CCCCEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GGMGHIPGVILGAVLLAVFPEFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RSEGLWPAPKHEDRIAKLAKRGGKKPVRA HCCCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSIQPIETSASLVEERHPAKTATISILIAAFVIAAPLVIGAAGGNYWVRVLDFAMLYVM CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLTSNFDWIAHAFPAGLHVPFFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHH VPIAMALAAVFGILLGAPTLRLRGDYLAIVTLGFGEIVRIFMNNLDRPVNVTNGPQGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPVTIAGFNLSQTHQIFGFSLPSVYMYYYLFVLCALLVIWVCTRLQHSRIGRAWAAIRE CCCCEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRNVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTFWESVVVLACVVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GGMGHIPGVILGAVLLAVFPEFLRSTMSPLQHMLFGHDIVDTEVIRQALYGLAMVVIMLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RSEGLWPAPKHEDRIAKLAKRGGKKPVRA HCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]