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The map label for this gene is 83719583

Identifier: 83719583

GI number: 83719583

Start: 39693

End: 40820

Strand: Direct

Name: 83719583

Synonym: BTH_I0040

Alternate gene names: NA

Gene position: 39693-40820 (Clockwise)

Preceding gene: 83719158

Following gene: 83718634

Centisome position: 1.04

GC content: 65.25

Gene sequence:

>1128_bases
TTGAAACGACAATACCTGGCACTTTCCATCGCGACGGCCGCCTGCGCGGCGCCGCAAGCGCACGCGCAGTCGAGCGTCCA
GCTCTACGGGCTCATCGACCTGAGCTTTCCGACCTATCAGTCGCACGCGAACGCGAAGGGCGATCACGTGATCGGCATGG
GGCTCGGCGGCGAGCCGTGGTTCAGCGGCAGCCGCTGGGGGCTGAAGGGCGCGGAGGACATCGGCGGCGGCACGAAGGTG
ATCTTCCGGCTCGAAAGCGAATACACGGTTGCCGATGGCAACATGGAGGACCCGGGCCAGATCTTCGACCGCGATGCGTG
GGTCGGCGTCGAAAACGACACGTTCGGCAAGCTCACCGCGGGCTTCCAGAACACGATCGCGCGCGACGCGGGGGCGATCT
ACGGCGACCCGTACGGCTCGGCGAAGCTCACGACCGAGGAAGGCGGCTGGACGAACGCGAACAACTTCAAGCAGATGATC
TTCTACGCGGCGGGCGCGACGGGTACGCGCTACAACAACGGCCTTGCGTGGAAGAAGCTGTTCGGCAACGGCATCTTCGC
GAGCGCGGGCTACGCGTTCAGCAATTCGACGAGCTTCGGGCAGAACTCGACCTATCAGGTCGCGCTCGGCTACAACGGCG
GCCCGTTCAACGTGTCGGGCTTCTTCAGCCACGTGAACCACGCGGGCTACGCGAACAAGTCGTTCTCGGTCGGCGGCAAC
TACACGTTCGACATCTTCCGCGTGAACGCCGGCTACTTCCGCTACCTGGGCGATCAGGGCGCGCTCGGCCAGCGCCAGGA
CAACGCGTGGACGGTGTCGTTCAAGGTCGCCCCGAAGGGCGCGCTCGACTACGAGCTCGGCTATCAGCAGATGCGCGTGC
ACAACGCCGCGTACAACAGCGACGGCAACGTGCCGAACGCGAACATCGGCGACTTCAGCCTCACGTCGGGTGTCGGCAAC
GGCTTCAAGGAAACGCTGTACGGCTCGGTGTTCTACCACCTGTCGAAGCGCACCGAGCTGTACCTCGCCGGCGACTACAT
GCGCCTGCACGGCGGCTACACGGTCGCGTCCACGCACGGCGCGACCAACCAGCTCGAGCTGACGACCGGCATCCGCACGC
GGTTCTGA

Upstream 100 bases:

>100_bases
CGATGGCGTGGCCGTTCGACGCGCATCGCGCAGCGTCTGCGCGGCATGCGATTCGTACTGCGAAAGAATGGCGATCAACA
CGATATCGGAGGGGACGATC

Downstream 100 bases:

>100_bases
TCCGCCGCGCGGGGCGGCCGGCCGACGCGCCGTGCCGTGCCGCCCCTCGCGCTCCCCGCCCCGCCCGTCTTTCCGTCTTT
CCCGCCTTTGCGCCGCGCCC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSFPTYQSHANAKGDHVIGMGLGGEPWFSGSRWGLKGAEDIGGGTKV
IFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARDAGAIYGDPYGSAKLTTEEGGWTNANNFKQMI
FYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVALGYNGGPFNVSGFFSHVNHAGYANKSFSVGGN
YTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQQMRVHNAAYNSDGNVPNANIGDFSLTSGVGN
GFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTTGIRTRF

Sequences:

>Translated_375_residues
MKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSFPTYQSHANAKGDHVIGMGLGGEPWFSGSRWGLKGAEDIGGGTKV
IFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARDAGAIYGDPYGSAKLTTEEGGWTNANNFKQMI
FYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVALGYNGGPFNVSGFFSHVNHAGYANKSFSVGGN
YTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQQMRVHNAAYNSDGNVPNANIGDFSLTSGVGN
GFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTTGIRTRF
>Mature_375_residues
MKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSFPTYQSHANAKGDHVIGMGLGGEPWFSGSRWGLKGAEDIGGGTKV
IFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARDAGAIYGDPYGSAKLTTEEGGWTNANNFKQMI
FYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVALGYNGGPFNVSGFFSHVNHAGYANKSFSVGGN
YTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQQMRVHNAAYNSDGNVPNANIGDFSLTSGVGN
GFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTTGIRTRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40482; Mature: 40482

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSFPTYQSHANAKGDHVIGMGLGGEPW
CCCEEEEEEEHHHHHCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCC
FSGSRWGLKGAEDIGGGTKVIFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTA
CCCCCCCCCCCHHCCCCEEEEEEEECCEEEECCCCCCCHHHHCCCEEEECCCCCCCCEEC
GFQNTIARDAGAIYGDPYGSAKLTTEEGGWTNANNFKQMIFYAAGATGTRYNNGLAWKKL
CHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHH
FGNGIFASAGYAFSNSTSFGQNSTYQVALGYNGGPFNVSGFFSHVNHAGYANKSFSVGGN
HCCCEEEECCEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCC
YTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQQMRVHNAAYNS
EEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHCCHHHHEEECCCCCC
DGNVPNANIGDFSLTSGVGNGFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHG
CCCCCCCCCCCEEECCCCCCCHHHHHHHHHEEEECCCEEEEEEECEEEEECCEEEEECCC
ATNQLELTTGIRTRF
CCCEEEEECCCCCCC
>Mature Secondary Structure
MKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSFPTYQSHANAKGDHVIGMGLGGEPW
CCCEEEEEEEHHHHHCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCC
FSGSRWGLKGAEDIGGGTKVIFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTA
CCCCCCCCCCCHHCCCCEEEEEEEECCEEEECCCCCCCHHHHCCCEEEECCCCCCCCEEC
GFQNTIARDAGAIYGDPYGSAKLTTEEGGWTNANNFKQMIFYAAGATGTRYNNGLAWKKL
CHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHH
FGNGIFASAGYAFSNSTSFGQNSTYQVALGYNGGPFNVSGFFSHVNHAGYANKSFSVGGN
HCCCEEEECCEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCC
YTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQQMRVHNAAYNS
EEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHCCHHHHEEECCCCCC
DGNVPNANIGDFSLTSGVGNGFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHG
CCCCCCCCCCCEEECCCCCCCHHHHHHHHHEEEECCCEEEEEEECEEEEECCEEEEECCC
ATNQLELTTGIRTRF
CCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]