| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mod [H]
Identifier: 83718634
GI number: 83718634
Start: 41277
End: 43325
Strand: Direct
Name: mod [H]
Synonym: BTH_I0041
Alternate gene names: 83718634
Gene position: 41277-43325 (Clockwise)
Preceding gene: 83719583
Following gene: 83721135
Centisome position: 1.08
GC content: 67.94
Gene sequence:
>2049_bases ATGCAATTGATGGGAAGGATGATGCAAAAACTCGATGCGGCGAGCCCGGAAGCGCAATCCGCGGATCTCGTGTCCGCGAA CGTCGAGCGCCTGAGGGCGCTCTTTCCGGACGTGGTGACCGAAGGACCGGACGGCGCGTCGGTGAATCTCGACGCGCTCG CGGCGATGGTCGGCGCGAGCGCCGCCGCCGTTGCCGACGCCGATGAGAAATACGGCCTGAACTGGCATGGCAAGCGCCGC GCGCGCCGGCTCGCGCTCACGCCTTCGACGGGCACGCTGCGCCCGTGCCCGCGCGAGAGCGTCGGCTGGGCGTCGACGCG CAATCTGATGATCGAGGGCGAGAACCTCGAGGTGCTGAAGCTGCTGCAAAAGAGCTACGCGGGGCGCGCGAAGCTCGTCT ACATCGATCCGCCGTACAACACCGGCAAGGATTTCGTCTATTCGGACAATTTCACCGACAGCCTGCGCCACTACCTCGAG CTGACCGGCCAGACGACGGACGGCAAGCGAATCAGCAGCCACACGGACGCGAGCGGCCGCTTCCACACGGACTGGCTGAA CATGATCTATCCGCGCCTGAAGCTCGCGCGCGATCTGCTCGCCGACGACGGCGTGATCGCCGTGCACATCGACGAGCACG AGCAGCACGCGCTCGTGCTCGTGATGCGCGAGATCTTCGGCGAGGACAACGAGCTCGGCGTCGCGGTGTGGGACAAGCGC AATCCGAAGGGCGACGCGCGCGGGATCGCATACCAGCACGAATCGATCGTGCTGTTCGCGCGCGACGCGCAGTTGCTGTT CGAGCGCGCGCCGCTCAAGCGCCCGAAACGCAACGCCCAACGCATGCTCGACGCGGCGCGCGGCGCGATCGCGGGCGCGG CGACGATCGCGGACGCGAACGCCGCGTACCGCGCCTGGGTGAAGTCGCAGACGACGCTGTCGGGCGGCGAGGCGATGTAC GACCGGATTTCGGCCGACGGCCGCGTGTACCGTCTCGTGTCGATGGCGTGGCCGAACAAGAAGAAGGCGCCCGACGATTA CTTCGTGCCGCTCGTGCATCCGGTGACGGGCAAGCCGTGCCCGGTGCCCGAGCGCGGCTGGCGCAATCCGCCCGCGACGA TGCAGGCGCTCATCGACAAGGGGCTCGTCGAGTTCGGCGCGGACGAGACCACGCAGCCGCAGCGGATCTACTTCCTCGAC GAGAACATGTACGAGAACGTGCCGTCGGTGCTGCCGTTCGGCGGCTCGGACGACGCGCTGATGAAGTCGCTCGGCATTCC GTTCGATCAGCCGAAGCCGGTGGAATTCGCCGCGTCGATCATCGGCTGGTGCACGGACGGCGACGATCTGATCGTCGACT TCTTCGGCGGCTCGGGCACGACCGGGCATGCGGTGATGGCGCTCAACGCCGCCGACGGCGGCAATCGCCGCTATGTGCTC GTGCAGTTGCCCGAGCCGCTCGACGCGGGCAGCAAGGATCAGAAAGCCGCCGCCGACTTCTGCGCGGCGCAGCGCGTGCC GCTCAATCTCGCCGAGCTGACGAAGGAGCGGCTGCGGCGCGCGGCGGCGCGGGTCGCGGCCGAGCATCCGGGCACGCGCG CCGACCTCGGTTTTCGCGTGTTCAGGCTCGACTCGACGAACGTCTCCGAGTGGGACCCGCGCGGCGACGACATCCAGCAA TCGCTGTTCGCGGCCGTCGAGCACATCAAGCCGAACCGCTCCGAGGAAGATCTGTTGTACGAACTAATGCTCAAGCTCGG CCTCGATCTGTGCGCGCCGATCGACGCGCGCACGATCGCCGGCAAGGCCGTCTACGTGATCGACGGCGCGATCGTCGCGT GCTTCGACGCGCACATCGACCGCGCGTCGACCGATGCGCTCGGCGAGGGCATCGTCGAGCTGATCGCCGAAGCGGCCGCG GCGGGCGCGGCCCACGCGCGCGACGTGACCTGCGTGTTTCGCGACAGCGGCTTCGCGGATGACGTCGCGAAGGTGAACCT GTCGGCGATCCTCGAGCAGCACGGCGTGAAGCGCATCCGGAGCCTCTGA
Upstream 100 bases:
>100_bases GCCGCCGCAAGTCCTTGACCTGCGCGTGACGGATCGCTAGCGTTTCGCCTTTGCCGCGCCGCGCGGCCCGGAAATCGGGT CCGCATGCCGGCGCGATGAC
Downstream 100 bases:
>100_bases TGCGCGCACGCGAGCCACACGCAGACAAGGAAGATTGAGCATGCAGTTGCATTTCGAGTCGGATCTCGACTATCAGCTCG AAGCGATCGAGGCGGTATGC
Product: type III DNA modification methyltransferase
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MQLMGRMMQKLDAASPEAQSADLVSANVERLRALFPDVVTEGPDGASVNLDALAAMVGASAAAVADADEKYGLNWHGKRR ARRLALTPSTGTLRPCPRESVGWASTRNLMIEGENLEVLKLLQKSYAGRAKLVYIDPPYNTGKDFVYSDNFTDSLRHYLE LTGQTTDGKRISSHTDASGRFHTDWLNMIYPRLKLARDLLADDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR NPKGDARGIAYQHESIVLFARDAQLLFERAPLKRPKRNAQRMLDAARGAIAGAATIADANAAYRAWVKSQTTLSGGEAMY DRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPCPVPERGWRNPPATMQALIDKGLVEFGADETTQPQRIYFLD ENMYENVPSVLPFGGSDDALMKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTGHAVMALNAADGGNRRYVL VQLPEPLDAGSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARVAAEHPGTRADLGFRVFRLDSTNVSEWDPRGDDIQQ SLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARTIAGKAVYVIDGAIVACFDAHIDRASTDALGEGIVELIAEAAA AGAAHARDVTCVFRDSGFADDVAKVNLSAILEQHGVKRIRSL
Sequences:
>Translated_682_residues MQLMGRMMQKLDAASPEAQSADLVSANVERLRALFPDVVTEGPDGASVNLDALAAMVGASAAAVADADEKYGLNWHGKRR ARRLALTPSTGTLRPCPRESVGWASTRNLMIEGENLEVLKLLQKSYAGRAKLVYIDPPYNTGKDFVYSDNFTDSLRHYLE LTGQTTDGKRISSHTDASGRFHTDWLNMIYPRLKLARDLLADDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR NPKGDARGIAYQHESIVLFARDAQLLFERAPLKRPKRNAQRMLDAARGAIAGAATIADANAAYRAWVKSQTTLSGGEAMY DRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPCPVPERGWRNPPATMQALIDKGLVEFGADETTQPQRIYFLD ENMYENVPSVLPFGGSDDALMKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTGHAVMALNAADGGNRRYVL VQLPEPLDAGSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARVAAEHPGTRADLGFRVFRLDSTNVSEWDPRGDDIQQ SLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARTIAGKAVYVIDGAIVACFDAHIDRASTDALGEGIVELIAEAAA AGAAHARDVTCVFRDSGFADDVAKVNLSAILEQHGVKRIRSL >Mature_682_residues MQLMGRMMQKLDAASPEAQSADLVSANVERLRALFPDVVTEGPDGASVNLDALAAMVGASAAAVADADEKYGLNWHGKRR ARRLALTPSTGTLRPCPRESVGWASTRNLMIEGENLEVLKLLQKSYAGRAKLVYIDPPYNTGKDFVYSDNFTDSLRHYLE LTGQTTDGKRISSHTDASGRFHTDWLNMIYPRLKLARDLLADDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR NPKGDARGIAYQHESIVLFARDAQLLFERAPLKRPKRNAQRMLDAARGAIAGAATIADANAAYRAWVKSQTTLSGGEAMY DRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPCPVPERGWRNPPATMQALIDKGLVEFGADETTQPQRIYFLD ENMYENVPSVLPFGGSDDALMKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTGHAVMALNAADGGNRRYVL VQLPEPLDAGSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARVAAEHPGTRADLGFRVFRLDSTNVSEWDPRGDDIQQ SLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARTIAGKAVYVIDGAIVACFDAHIDRASTDALGEGIVELIAEAAA AGAAHARDVTCVFRDSGFADDVAKVNLSAILEQHGVKRIRSL
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 74443; Mature: 74443
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLMGRMMQKLDAASPEAQSADLVSANVERLRALFPDVVTEGPDGASVNLDALAAMVGAS CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC AAAVADADEKYGLNWHGKRRARRLALTPSTGTLRPCPRESVGWASTRNLMIEGENLEVLK HHHHCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHH LLQKSYAGRAKLVYIDPPYNTGKDFVYSDNFTDSLRHYLELTGQTTDGKRISSHTDASGR HHHHHCCCCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC FHTDWLNMIYPRLKLARDLLADDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR EEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC NPKGDARGIAYQHESIVLFARDAQLLFERAPLKRPKRNAQRMLDAARGAIAGAATIADAN CCCCCCCCEEEECCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC AAYRAWVKSQTTLSGGEAMYDRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPC HHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC PVPERGWRNPPATMQALIDKGLVEFGADETTQPQRIYFLDENMYENVPSVLPFGGSDDAL CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCHHH MKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTGHAVMALNAADGGNRRYVL HHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEE VQLPEPLDAGSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARVAAEHPGTRADLGFRV EECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE FRLDSTNVSEWDPRGDDIQQSLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARTIA EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCCHHCC GKAVYVIDGAIVACFDAHIDRASTDALGEGIVELIAEAAAAGAAHARDVTCVFRDSGFAD CCEEEEECCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCH DVAKVNLSAILEQHGVKRIRSL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLMGRMMQKLDAASPEAQSADLVSANVERLRALFPDVVTEGPDGASVNLDALAAMVGAS CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC AAAVADADEKYGLNWHGKRRARRLALTPSTGTLRPCPRESVGWASTRNLMIEGENLEVLK HHHHCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHH LLQKSYAGRAKLVYIDPPYNTGKDFVYSDNFTDSLRHYLELTGQTTDGKRISSHTDASGR HHHHHCCCCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC FHTDWLNMIYPRLKLARDLLADDGVIAVHIDEHEQHALVLVMREIFGEDNELGVAVWDKR EEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCC NPKGDARGIAYQHESIVLFARDAQLLFERAPLKRPKRNAQRMLDAARGAIAGAATIADAN CCCCCCCCEEEECCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC AAYRAWVKSQTTLSGGEAMYDRISADGRVYRLVSMAWPNKKKAPDDYFVPLVHPVTGKPC HHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC PVPERGWRNPPATMQALIDKGLVEFGADETTQPQRIYFLDENMYENVPSVLPFGGSDDAL CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCHHH MKSLGIPFDQPKPVEFAASIIGWCTDGDDLIVDFFGGSGTTGHAVMALNAADGGNRRYVL HHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEE VQLPEPLDAGSKDQKAAADFCAAQRVPLNLAELTKERLRRAAARVAAEHPGTRADLGFRV EECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE FRLDSTNVSEWDPRGDDIQQSLFAAVEHIKPNRSEEDLLYELMLKLGLDLCAPIDARTIA EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCCHHCC GKAVYVIDGAIVACFDAHIDRASTDALGEGIVELIAEAAAAGAAHARDVTCVFRDSGFAD CCEEEEECCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCH DVAKVNLSAILEQHGVKRIRSL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]