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The map label for this gene is paaD [H]

Identifier: 83719455

GI number: 83719455

Start: 3534481

End: 3535350

Strand: Direct

Name: paaD [H]

Synonym: BTH_I3100

Alternate gene names: 83719455

Gene position: 3534481-3535350 (Clockwise)

Preceding gene: 83720273

Following gene: 83718442

Centisome position: 92.79

GC content: 72.76

Gene sequence:

>870_bases
ATGCGGCGACGGCGTCCGGCATCGGCGCGGCGATCGCATCGATCGAGCCGGCGTGGCGCGCCGATATCGAAGCGACGCTC
GCCGAAGCGACGCTCACGCTGTCCACCGCCGGCCAGTACGTGCCGACCGGCAAGCGCGGCGAGCACTCGGAGCACATGGG
CTATCTGCTCGCTCAGTTGCAGAGCGTCGCGCGCCAGCATCCGGGCGCGACCTGGTAAGCCCGCGCCCGACGAACGACGG
AGCCAGACGATGTCCGCCCTCCCCGCATCCGCCCCCGGCCAGCCGGTCACTGCCGGCCACCGCCCGGGCGAACGCCCCGA
CTACGCCCGAGCGGCCGCGCACGGCGACGATCCGCTCATCGAACGCGCGTGGAACGCGCTAGAAGCGGTGCCCGATCCGG
AGATTCCGGTCGTGTCGATCCGCGAGCTCGGCATCCTGCGCGACGTGCGCCGCGCCGCCGATGGCGCCCTAGAAGTCGTG
ATCACGCCGACCTACTCAGGCTGCCCGGCGATGCAGCAGATCGCCGAAGACATCGACGCCGCGCTCCGGCAGGCGGCCAT
CGCACCGCACCGAACCGTGACCGTGCTCGCGCCTGCGTGGACGACCGACTGGATCACTGCCGACGCCCGCGAGAAGCTCC
GCGCGTACGGCATCGCGCCGCCCGCCGGCCACTGCGCCGGGGCGCGCGGCGCAGGCGCCGCCGCGCCGCGCGCCGTCCGC
TTCGTGCCCAAACCGCTCGCCGCGCCCGCCTGCCCGCGCTGCGGCTCCGCGCACACCGAGCGGCTCGCGCAGTTCGCGTC
GACCGCATGCAAGGCGCTCTATCGCTGCATCGACTGCCGCGAACCCTTCGACTACTTCAAACCTTATTGA

Upstream 100 bases:

>100_bases
TTCGGCGACGGCACCGACGAATCGCATCGTCGCGCGCAGGCCGCACTCGACTATCTGATGCCGTACACGCGCGAATTCTT
CGCGGCGGACGCGGTCGACG

Downstream 100 bases:

>100_bases
TATGGCGACTCCGCAATTCCATCCGCTGCGCATTCGCGACGTGCGGCCCGAGACCGCCGACGCCGTCACGGTGTCGTTCG
AGGTGCCGCCCGAGCTGCGC

Product: phenylacetic acid degradation protein PaaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRRRRPASARRSHRSSRRGAPISKRRSPKRRSRCPPPASTCRPASAASTRSTWAICSLSCRASRASIRARPGKPAPDERR
SQTMSALPASAPGQPVTAGHRPGERPDYARAAAHGDDPLIERAWNALEAVPDPEIPVVSIRELGILRDVRRAADGALEVV
ITPTYSGCPAMQQIAEDIDAALRQAAIAPHRTVTVLAPAWTTDWITADAREKLRAYGIAPPAGHCAGARGAGAAAPRAVR
FVPKPLAAPACPRCGSAHTERLAQFASTACKALYRCIDCREPFDYFKPY

Sequences:

>Translated_289_residues
MRRRRPASARRSHRSSRRGAPISKRRSPKRRSRCPPPASTCRPASAASTRSTWAICSLSCRASRASIRARPGKPAPDERR
SQTMSALPASAPGQPVTAGHRPGERPDYARAAAHGDDPLIERAWNALEAVPDPEIPVVSIRELGILRDVRRAADGALEVV
ITPTYSGCPAMQQIAEDIDAALRQAAIAPHRTVTVLAPAWTTDWITADAREKLRAYGIAPPAGHCAGARGAGAAAPRAVR
FVPKPLAAPACPRCGSAHTERLAQFASTACKALYRCIDCREPFDYFKPY
>Mature_289_residues
MRRRRPASARRSHRSSRRGAPISKRRSPKRRSRCPPPASTCRPASAASTRSTWAICSLSCRASRASIRARPGKPAPDERR
SQTMSALPASAPGQPVTAGHRPGERPDYARAAAHGDDPLIERAWNALEAVPDPEIPVVSIRELGILRDVRRAADGALEVV
ITPTYSGCPAMQQIAEDIDAALRQAAIAPHRTVTVLAPAWTTDWITADAREKLRAYGIAPPAGHCAGARGAGAAAPRAVR
FVPKPLAAPACPRCGSAHTERLAQFASTACKALYRCIDCREPFDYFKPY

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=170, Percent_Identity=48.8235294117647, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 31132; Mature: 31132

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRRPASARRSHRSSRRGAPISKRRSPKRRSRCPPPASTCRPASAASTRSTWAICSLSC
CCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHEEEEHHH
RASRASIRARPGKPAPDERRSQTMSALPASAPGQPVTAGHRPGERPDYARAAAHGDDPLI
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHH
ERAWNALEAVPDPEIPVVSIRELGILRDVRRAADGALEVVITPTYSGCPAMQQIAEDIDA
HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
ALRQAAIAPHRTVTVLAPAWTTDWITADAREKLRAYGIAPPAGHCAGARGAGAAAPRAVR
HHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHE
FVPKPLAAPACPRCGSAHTERLAQFASTACKALYRCIDCREPFDYFKPY
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure
MRRRRPASARRSHRSSRRGAPISKRRSPKRRSRCPPPASTCRPASAASTRSTWAICSLSC
CCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHEEEEHHH
RASRASIRARPGKPAPDERRSQTMSALPASAPGQPVTAGHRPGERPDYARAAAHGDDPLI
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHH
ERAWNALEAVPDPEIPVVSIRELGILRDVRRAADGALEVVITPTYSGCPAMQQIAEDIDA
HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
ALRQAAIAPHRTVTVLAPAWTTDWITADAREKLRAYGIAPPAGHCAGARGAGAAAPRAVR
HHHHHHCCCCCEEEEEECCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHE
FVPKPLAAPACPRCGSAHTERLAQFASTACKALYRCIDCREPFDYFKPY
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]