| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is paaK [H]
Identifier: 83718442
GI number: 83718442
Start: 3535352
End: 3536440
Strand: Direct
Name: paaK [H]
Synonym: BTH_I3101
Alternate gene names: 83718442
Gene position: 3535352-3536440 (Clockwise)
Preceding gene: 83719455
Following gene: 83720985
Centisome position: 92.81
GC content: 66.94
Gene sequence:
>1089_bases ATGGCGACTCCGCAATTCCATCCGCTGCGCATTCGCGACGTGCGGCCCGAGACCGCCGACGCCGTCACGGTGTCGTTCGA GGTGCCGCCCGAGCTGCGCGATGCGTACCGCTTCACGCAAGGTCAGTTCGTCACGCTGAAGGCGCATGTCGACGGCGAGG AAACCCGCCGCTCGTATTCGATCTGCGTCGGCACGACCGACTACGACCGCGACGGCGAGCTGCGCATCGGCATCAAGCGC GTGCGCGGCGGCCGCTTCTCGAACTTCGCGTTCGATACGCTCAAGCCCGGTCACACGATCGACGTGATGACGCCGGACGG CCGCTTCTTCACGCACCTGAACGCGGAGCACGGCAAGCAGTACGTCGCGTTCGCGGGCGGCTCGGGGATCACACCCGTAC TCGCGATCGTCAAGACGACGCTCGAGCTCGAGCCGCGCAGCGCGTTCACGCTGATCTACGGCAACCGCAGCGTCGATTCG ATCATGTTCGCCGAGGAGCTCGAGGATCTGAAGAACCGCTTCATGCAGCGGTTCGCCCTCTACCACGTGCTGTCCGACGA CGTGCAGGACGTCGAGCTGTTCAACGGCGTGCTCGATCAAGCGAAATGCGCGGCGTTCATCGAGTCGCTCGTGCCCGCCG CGACCATCGACGAAGCGTTCATCTGCGGCCCGGCGCCGATGATGGACGCCGCCGAGGCCGCACTCGCCGAAGCGGGCGTG CCGCGCGAGCGGGTGCACGTCGAGCGCTTCGGCACGCCGCTGCCTCAGGCGGGCGCGCCCGCCGTCGAGATCACCGACGA CACGCCCGCCGCCGACCTCGAAATCGTGCTCGACGGCAAGAAGCGCAAGCTGCGCCTGCCGTACGAAGGCGTGAGCCTCC TCGACGTCGGGCTGCGCGCAGGCCTCGCGCTGCCATACGCGTGCAAGGGCGGCGTCTGCTGCACGTGCCGCGCGAAGGTG CTCGAAGGTGAGGTGTGGATGGAGAAGAACTACACGCTGGAGCCGCAGGAGATCGCCGACGGATTCGTGCTCACCTGCCA GTGCCATCCGGTCAGCGAGAAAATCGTCGTCAGCTACGACGAACGGTAG
Upstream 100 bases:
>100_bases CACACCGAGCGGCTCGCGCAGTTCGCGTCGACCGCATGCAAGGCGCTCTATCGCTGCATCGACTGCCGCGAACCCTTCGA CTACTTCAAACCTTATTGAT
Downstream 100 bases:
>100_bases GCGGCGTCTTGCCGCGCGGTTACGCGCCGCCCGCCATCTCGCTTACACTAGGGGCCGCCTGCGGACCGGACGCGCGACGC GCCGGCTCCCAGGCGGCTTT
Product: phenylacetate-CoA oxygenase/reductase subunit PaaK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYSICVGTTDYDRDGELRIGIKR VRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQYVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDS IMFAEELEDLKNRFMQRFALYHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKV LEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYDER
Sequences:
>Translated_362_residues MATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYSICVGTTDYDRDGELRIGIKR VRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQYVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDS IMFAEELEDLKNRFMQRFALYHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKV LEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYDER >Mature_361_residues ATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYSICVGTTDYDRDGELRIGIKRV RGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQYVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDSI MFAEELEDLKNRFMQRFALYHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGVP RERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKVL EGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYDER
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Homo sapiens, GI49574502, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI47778923, Length=229, Percent_Identity=27.0742358078603, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1787658, Length=357, Percent_Identity=46.7787114845938, Blast_Score=326, Evalue=1e-90, Organism=Escherichia coli, GI1787098, Length=350, Percent_Identity=25.4285714285714, Blast_Score=111, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6322146, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39950; Mature: 39819
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYS CCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEEECCCHHHCCEEE ICVGTTDYDRDGELRIGIKRVRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQ EEEECCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEECCCCCEEEEECHHHCCE YVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDSIMFAEELEDLKNRFMQRFAL EEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH YHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRA CHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHC GLALPYACKGGVCCTCRAKVLEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYD CCCCCCCCCCCEEEEEEHEEECCEEEECCCCCCCHHHHCCCEEEEEEECCCCCEEEEEEC ER CC >Mature Secondary Structure ATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYS CCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEEECCCHHHCCEEE ICVGTTDYDRDGELRIGIKRVRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQ EEEECCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEECCCCCEEEEECHHHCCE YVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDSIMFAEELEDLKNRFMQRFAL EEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH YHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRA CHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHC GLALPYACKGGVCCTCRAKVLEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYD CCCCCCCCCCCEEEEEEHEEECCEEEECCCCCCCHHHHCCCEEEEEEECCCCCEEEEEEC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]