Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is paaK [H]

Identifier: 83718442

GI number: 83718442

Start: 3535352

End: 3536440

Strand: Direct

Name: paaK [H]

Synonym: BTH_I3101

Alternate gene names: 83718442

Gene position: 3535352-3536440 (Clockwise)

Preceding gene: 83719455

Following gene: 83720985

Centisome position: 92.81

GC content: 66.94

Gene sequence:

>1089_bases
ATGGCGACTCCGCAATTCCATCCGCTGCGCATTCGCGACGTGCGGCCCGAGACCGCCGACGCCGTCACGGTGTCGTTCGA
GGTGCCGCCCGAGCTGCGCGATGCGTACCGCTTCACGCAAGGTCAGTTCGTCACGCTGAAGGCGCATGTCGACGGCGAGG
AAACCCGCCGCTCGTATTCGATCTGCGTCGGCACGACCGACTACGACCGCGACGGCGAGCTGCGCATCGGCATCAAGCGC
GTGCGCGGCGGCCGCTTCTCGAACTTCGCGTTCGATACGCTCAAGCCCGGTCACACGATCGACGTGATGACGCCGGACGG
CCGCTTCTTCACGCACCTGAACGCGGAGCACGGCAAGCAGTACGTCGCGTTCGCGGGCGGCTCGGGGATCACACCCGTAC
TCGCGATCGTCAAGACGACGCTCGAGCTCGAGCCGCGCAGCGCGTTCACGCTGATCTACGGCAACCGCAGCGTCGATTCG
ATCATGTTCGCCGAGGAGCTCGAGGATCTGAAGAACCGCTTCATGCAGCGGTTCGCCCTCTACCACGTGCTGTCCGACGA
CGTGCAGGACGTCGAGCTGTTCAACGGCGTGCTCGATCAAGCGAAATGCGCGGCGTTCATCGAGTCGCTCGTGCCCGCCG
CGACCATCGACGAAGCGTTCATCTGCGGCCCGGCGCCGATGATGGACGCCGCCGAGGCCGCACTCGCCGAAGCGGGCGTG
CCGCGCGAGCGGGTGCACGTCGAGCGCTTCGGCACGCCGCTGCCTCAGGCGGGCGCGCCCGCCGTCGAGATCACCGACGA
CACGCCCGCCGCCGACCTCGAAATCGTGCTCGACGGCAAGAAGCGCAAGCTGCGCCTGCCGTACGAAGGCGTGAGCCTCC
TCGACGTCGGGCTGCGCGCAGGCCTCGCGCTGCCATACGCGTGCAAGGGCGGCGTCTGCTGCACGTGCCGCGCGAAGGTG
CTCGAAGGTGAGGTGTGGATGGAGAAGAACTACACGCTGGAGCCGCAGGAGATCGCCGACGGATTCGTGCTCACCTGCCA
GTGCCATCCGGTCAGCGAGAAAATCGTCGTCAGCTACGACGAACGGTAG

Upstream 100 bases:

>100_bases
CACACCGAGCGGCTCGCGCAGTTCGCGTCGACCGCATGCAAGGCGCTCTATCGCTGCATCGACTGCCGCGAACCCTTCGA
CTACTTCAAACCTTATTGAT

Downstream 100 bases:

>100_bases
GCGGCGTCTTGCCGCGCGGTTACGCGCCGCCCGCCATCTCGCTTACACTAGGGGCCGCCTGCGGACCGGACGCGCGACGC
GCCGGCTCCCAGGCGGCTTT

Product: phenylacetate-CoA oxygenase/reductase subunit PaaK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYSICVGTTDYDRDGELRIGIKR
VRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQYVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDS
IMFAEELEDLKNRFMQRFALYHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV
PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKV
LEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYDER

Sequences:

>Translated_362_residues
MATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYSICVGTTDYDRDGELRIGIKR
VRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQYVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDS
IMFAEELEDLKNRFMQRFALYHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV
PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKV
LEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYDER
>Mature_361_residues
ATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYSICVGTTDYDRDGELRIGIKRV
RGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQYVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDSI
MFAEELEDLKNRFMQRFALYHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGVP
RERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRAGLALPYACKGGVCCTCRAKVL
EGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYDER

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Homo sapiens, GI49574502, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI47778923, Length=229, Percent_Identity=27.0742358078603, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1787658, Length=357, Percent_Identity=46.7787114845938, Blast_Score=326, Evalue=1e-90,
Organism=Escherichia coli, GI1787098, Length=350, Percent_Identity=25.4285714285714, Blast_Score=111, Evalue=8e-26,
Organism=Saccharomyces cerevisiae, GI6322146, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR011884
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39950; Mature: 39819

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYS
CCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEEECCCHHHCCEEE
ICVGTTDYDRDGELRIGIKRVRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQ
EEEECCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEECCCCCEEEEECHHHCCE
YVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDSIMFAEELEDLKNRFMQRFAL
EEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC
PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRA
CHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHC
GLALPYACKGGVCCTCRAKVLEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYD
CCCCCCCCCCCEEEEEEHEEECCEEEECCCCCCCHHHHCCCEEEEEEECCCCCEEEEEEC
ER
CC
>Mature Secondary Structure 
ATPQFHPLRIRDVRPETADAVTVSFEVPPELRDAYRFTQGQFVTLKAHVDGEETRRSYS
CCCCCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEEECCCHHHCCEEE
ICVGTTDYDRDGELRIGIKRVRGGRFSNFAFDTLKPGHTIDVMTPDGRFFTHLNAEHGKQ
EEEECCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEECCCCCEEEEECHHHCCE
YVAFAGGSGITPVLAIVKTTLELEPRSAFTLIYGNRSVDSIMFAEELEDLKNRFMQRFAL
EEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
YHVLSDDVQDVELFNGVLDQAKCAAFIESLVPAATIDEAFICGPAPMMDAAEAALAEAGV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC
PRERVHVERFGTPLPQAGAPAVEITDDTPAADLEIVLDGKKRKLRLPYEGVSLLDVGLRA
CHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHC
GLALPYACKGGVCCTCRAKVLEGEVWMEKNYTLEPQEIADGFVLTCQCHPVSEKIVVSYD
CCCCCCCCCCCEEEEEEHEEECCEEEECCCCCCCHHHHCCCEEEEEEECCCCCEEEEEEC
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9097039; 9278503; 10766858 [H]