| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is wzb [C]
Identifier: 83719249
GI number: 83719249
Start: 2119527
End: 2120006
Strand: Direct
Name: wzb [C]
Synonym: BTH_I1873
Alternate gene names: 83719249
Gene position: 2119527-2120006 (Clockwise)
Preceding gene: 83720367
Following gene: 83718552
Centisome position: 55.64
GC content: 67.08
Gene sequence:
>480_bases ATGAAAAGCGTCGCGATCTGTTTCGTCTGCCTCGGCAACATCTGCCGCTCGCCCACCGCGGAAGGGGTGATGCGTCATCA GGTGGCGGCAGCGGGGCTTGACGCCGTGATCGAGATCGATTCGGCCGGCACGGGCGACTGGCATGTCGGCGAGGCGCCCG ACGCACGCGCGCAGCAAGCGGCGCGTGCGCGGGGCTACGATCTGTCGACGTTGCGGGCGCGGCAGATCGGCGACGCCGAT TTCGAACGCTTCGATCTCGTGCTCGCGATGGATTGCGCCAATCTTGCGGAGTTGCGCAAGCGCTGCCCGCCGCAATATCG GGGCAAGATCCGGCTCCTGATGGCGTACGCGGGCGACGGATCGGCGGGCGAAATCGCCGATCCGTATTTCGGCGGCGCGC GTGGTTTCGAACAGGTGCTCGATCAGTGCGAGGACGCGTGCCGCGGCCTCCTCGAAAGCCTGCGCGAAACGGCACGCTGA
Upstream 100 bases:
>100_bases GCGCTGTGAAGCTGAATCCGGCGCAAGCGGGAATCGGCGCGCCTTTGTATAATGGCGCGTTGCTCGTCCGAGCGATTCGC CGCGAGTGTCCGGCAGCACA
Downstream 100 bases:
>100_bases AGCGCCGCATACAACCCCTTTTAGTGGCAGGGATACTTGACTAAATTTGTCAAATATTTATACTTGACCAAAATCGTCAA GATTGCTGCCCATTCAATAC
Product: low molecular weight protein-tyrosine-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDAVIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSTLRARQIGDAD FERFDLVLAMDCANLAELRKRCPPQYRGKIRLLMAYAGDGSAGEIADPYFGGARGFEQVLDQCEDACRGLLESLRETAR
Sequences:
>Translated_159_residues MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDAVIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSTLRARQIGDAD FERFDLVLAMDCANLAELRKRCPPQYRGKIRLLMAYAGDGSAGEIADPYFGGARGFEQVLDQCEDACRGLLESLRETAR >Mature_159_residues MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDAVIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSTLRARQIGDAD FERFDLVLAMDCANLAELRKRCPPQYRGKIRLLMAYAGDGSAGEIADPYFGGARGFEQVLDQCEDACRGLLESLRETAR
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI6005988, Length=150, Percent_Identity=41.3333333333333, Blast_Score=110, Evalue=4e-25, Organism=Homo sapiens, GI4757714, Length=150, Percent_Identity=40, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6325330, Length=152, Percent_Identity=32.8947368421053, Blast_Score=103, Evalue=1e-23, Organism=Drosophila melanogaster, GI78706770, Length=152, Percent_Identity=39.4736842105263, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI78706772, Length=152, Percent_Identity=39.4736842105263, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI78706766, Length=148, Percent_Identity=37.8378378378378, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI78706768, Length=148, Percent_Identity=37.8378378378378, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI78711846, Length=149, Percent_Identity=40.2684563758389, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI78706764, Length=125, Percent_Identity=37.6, Blast_Score=90, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 17182; Mature: 17182
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDAVIEIDSAGTGDWHVGEAPDARAQQA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHH ARARGYDLSTLRARQIGDADFERFDLVLAMDCANLAELRKRCPPQYRGKIRLLMAYAGDG HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC SAGEIADPYFGGARGFEQVLDQCEDACRGLLESLRETAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDAVIEIDSAGTGDWHVGEAPDARAQQA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHH ARARGYDLSTLRARQIGDADFERFDLVLAMDCANLAELRKRCPPQYRGKIRLLMAYAGDG HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC SAGEIADPYFGGARGFEQVLDQCEDACRGLLESLRETAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]