| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719229
Identifier: 83719229
GI number: 83719229
Start: 2966814
End: 2967908
Strand: Direct
Name: 83719229
Synonym: BTH_I2605
Alternate gene names: NA
Gene position: 2966814-2967908 (Clockwise)
Preceding gene: 83720450
Following gene: 83720751
Centisome position: 77.89
GC content: 70.5
Gene sequence:
>1095_bases ATGACGACGAACACGTTCGACACGAACGGCGCAACGGCCGCTCCGTCCGCGCCGGAGCGGCGCGATTTCCTTGCCCGCGC GGGCGGCGGCCTCGGCCTCGCCGCAGCCGGGCTCACGCTCGGCGCGGCAGCGGCGCCCGCCAACGCGATCGCGGCCGCCG CCACGGCCGGCGTCGATGTCGCCCCCGCGTCGCCCGGTGACGGATCGCCACGGCGCGCACCGGCCGGCGACGCGGCGCAC GGCGCGTTCTGGCCGAACGGCGCGCGGCTCGTGATCTCGATCTCGATGCAGTTCGAGGCGGGCGGCCAGCCGCCGACGGG TGCGGACAGTCCGTTCCCGCACGTCGACTTTCCGCCGCAAGTGCCCGTCGATCTGGCGTCCGCGACGTGGTTTGCATACG GCTACCGCGAAGGCATTCCGCGCATGCTCGATTTGTGGGACCGGCACGGCGTGAAGGTGACGTCGCACATGATCGGCGAG GCGGTGCGCCACCGGCCGGACCTCGCGCGCGAGATCGTCGCGCGCGGCCACGAGGCGGCGGGACACGGCCCGCGCTGGAG CTCGCAGTACGCGCTCTCGCGCGACGAAGAGCGGCGCTTCCTGATCGCCGCGCGCGACATGGTCGAAGCCGAAACGGGCG CGCGGCCCGTCGGCTACAACTGCAACTGGCTCAGACGCGGGCCGAACACGCTGCCGCTATTGCAGGAGCTCGGCTACCTG TACCACATCGACGACGTGAGCCGCGACGAGCCGTTCATCGAGCAGGTGAACGGCCGGGATTTCGTCGTCGTGCCCTACAC GCTGCGCAACAACGACATCCTGCTGATCGAGGGCCGCAACTATTCGCCCGGGCAGTTCCTCGACCAGATCAAGCTCGACT TCGATCAGTTGTACGACGAAGCCGCCACGCGGCGGCGGATGATGTCGATCAGCGCGCACGACCGGATCAGCGGCACGCCG CAGATGGTGCGCGCGTGGGACGCGTTCCTGCGCTACGCGAAATCGCATCCGGGCGTCGCGTTCATGCGCAAGGACGATAT CGCCCGGCACGCGCTGCACAGCCCGCTCACGCTGCGCGAGAGCGAAACCCTCTGA
Upstream 100 bases:
>100_bases TATCGCATCGAGCACGGCCGCATCGCCGAGAACTGGCACATCGAAGACAACCTGACGCTGCTGCGCCAGCTCGGCGTCGC CGCATGACGGAGGAACGAAC
Downstream 100 bases:
>100_bases CGGGCGGCGGCGCCGCCTTCAATCCTCTTCGTTCAGGAGAACACACGATGCAGGTTTCTTTCAACGATCAGCGCGTTCTC GTCGTCGGCGGCAGTTCCGG
Product: polysaccharide deacetylase family protein
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTTNTFDTNGATAAPSAPERRDFLARAGGGLGLAAAGLTLGAAAAPANAIAAAATAGVDVAPASPGDGSPRRAPAGDAAH GAFWPNGARLVISISMQFEAGGQPPTGADSPFPHVDFPPQVPVDLASATWFAYGYREGIPRMLDLWDRHGVKVTSHMIGE AVRHRPDLAREIVARGHEAAGHGPRWSSQYALSRDEERRFLIAARDMVEAETGARPVGYNCNWLRRGPNTLPLLQELGYL YHIDDVSRDEPFIEQVNGRDFVVVPYTLRNNDILLIEGRNYSPGQFLDQIKLDFDQLYDEAATRRRMMSISAHDRISGTP QMVRAWDAFLRYAKSHPGVAFMRKDDIARHALHSPLTLRESETL
Sequences:
>Translated_364_residues MTTNTFDTNGATAAPSAPERRDFLARAGGGLGLAAAGLTLGAAAAPANAIAAAATAGVDVAPASPGDGSPRRAPAGDAAH GAFWPNGARLVISISMQFEAGGQPPTGADSPFPHVDFPPQVPVDLASATWFAYGYREGIPRMLDLWDRHGVKVTSHMIGE AVRHRPDLAREIVARGHEAAGHGPRWSSQYALSRDEERRFLIAARDMVEAETGARPVGYNCNWLRRGPNTLPLLQELGYL YHIDDVSRDEPFIEQVNGRDFVVVPYTLRNNDILLIEGRNYSPGQFLDQIKLDFDQLYDEAATRRRMMSISAHDRISGTP QMVRAWDAFLRYAKSHPGVAFMRKDDIARHALHSPLTLRESETL >Mature_363_residues TTNTFDTNGATAAPSAPERRDFLARAGGGLGLAAAGLTLGAAAAPANAIAAAATAGVDVAPASPGDGSPRRAPAGDAAHG AFWPNGARLVISISMQFEAGGQPPTGADSPFPHVDFPPQVPVDLASATWFAYGYREGIPRMLDLWDRHGVKVTSHMIGEA VRHRPDLAREIVARGHEAAGHGPRWSSQYALSRDEERRFLIAARDMVEAETGARPVGYNCNWLRRGPNTLPLLQELGYLY HIDDVSRDEPFIEQVNGRDFVVVPYTLRNNDILLIEGRNYSPGQFLDQIKLDFDQLYDEAATRRRMMSISAHDRISGTPQ MVRAWDAFLRYAKSHPGVAFMRKDDIARHALHSPLTLRESETL
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39684; Mature: 39553
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNTFDTNGATAAPSAPERRDFLARAGGGLGLAAAGLTLGAAAAPANAIAAAATAGVDV CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEE APASPGDGSPRRAPAGDAAHGAFWPNGARLVISISMQFEAGGQPPTGADSPFPHVDFPPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC VPVDLASATWFAYGYREGIPRMLDLWDRHGVKVTSHMIGEAVRHRPDLAREIVARGHEAA CCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC GHGPRWSSQYALSRDEERRFLIAARDMVEAETGARPVGYNCNWLRRGPNTLPLLQELGYL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCE YHIDDVSRDEPFIEQVNGRDFVVVPYTLRNNDILLIEGRNYSPGQFLDQIKLDFDQLYDE EEECCCCCCCHHHHHCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH AATRRRMMSISAHDRISGTPQMVRAWDAFLRYAKSHPGVAFMRKDDIARHALHSPLTLRE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCC SETL CCCC >Mature Secondary Structure TTNTFDTNGATAAPSAPERRDFLARAGGGLGLAAAGLTLGAAAAPANAIAAAATAGVDV CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEE APASPGDGSPRRAPAGDAAHGAFWPNGARLVISISMQFEAGGQPPTGADSPFPHVDFPPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC VPVDLASATWFAYGYREGIPRMLDLWDRHGVKVTSHMIGEAVRHRPDLAREIVARGHEAA CCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC GHGPRWSSQYALSRDEERRFLIAARDMVEAETGARPVGYNCNWLRRGPNTLPLLQELGYL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCE YHIDDVSRDEPFIEQVNGRDFVVVPYTLRNNDILLIEGRNYSPGQFLDQIKLDFDQLYDE EEECCCCCCCHHHHHCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH AATRRRMMSISAHDRISGTPQMVRAWDAFLRYAKSHPGVAFMRKDDIARHALHSPLTLRE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCC SETL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA