| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is livH [H]
Identifier: 83719214
GI number: 83719214
Start: 1701540
End: 1703168
Strand: Reverse
Name: livH [H]
Synonym: BTH_I1503
Alternate gene names: 83719214
Gene position: 1703168-1701540 (Counterclockwise)
Preceding gene: 83720346
Following gene: 83720104
Centisome position: 44.71
GC content: 70.96
Gene sequence:
>1629_bases ATGCCCACGCCTTTGAGCCGCGCCGCTCGCGCGCTCGCGGCGCTCGCCGTCTGCGCGGCGCTGTCGCTCGGCGCGCCGAG CGCGGCGCACGCGGTCACGGCCGCCGACGTCGCCGCGCTCGCCGGCGACGACTTCGATGCGAAGAGCGCCGCGATCGACC ATCTCGCCGCCGAGCGCGACGCCGCCGCCGCCGCGCTGCTGAATGCGCTCGCGAACGGCGACGCGCTCGCGACCGACGCG GGACGCATCCTCGTCCAGCACGGCGACGCCGCGCGCGACGCGCTGACGAACGCGCCCGCGCAGGCGGGCGACGCGCAGCC GGTGATGCTCAACAACCTGCTGCGCACGAAGATCGCGAACGCGCTGTCGGGGCTCGATCTCGCGTCGCCCGCTATCGACA CGCGCCGCCGCGCGATCGATGCGCTGCTCAAGAGCCCGGATGCCGCGCTCAAGCCGATGATCGACGCCGCGCGTGCGAAG GAAACCGATCCGGTGCTCAAGCGCCGCCTCGACGCGCTATGGGCGATCGCCGCGCTGCGCGACGCCGATCCCGCGAAGCG CCTCGAAGCGGTGCGGCTCGTGGCCGCGCGCAGCGATCTCGACATGATCGAGCAGTTGCGCCCGCTCGTCGCGAAGCGCT CCGACGGCAGCGATGCGGAACCCGATGCCCGCGTGCGCGAAGCCGCGCAGCACGGGCTCGACGCGCTCTATGCGATCCAG CGCCGCGGCGAGATCGCGGGCACGCTGTTCGCGGGGTTGTCGCTCGGCAGCGTGCTGCTGCTCGCCGCGCTCGGCCTCGC GATCACGTACGGCCTCATCGGCGTCATCAACATGGCGCACGGCGAGTTCCTGATGATCGGCGCGTATGCGACCTACGTCG TGCAAACGCTCGTGCAGCGCTATCTGCCGGGCGCGTTCGACTGGTATCCGCTCGCCGCGATTCCGGCGTCGTTTCTGGCG GCGGCCGCGCTCGGCGTCGTGCTCGAGCGCACGGTGCTCAGGCACCTGTACGGCCGCCCGCTCGAGACGCTGCTTGCGAC GTTCGGCGTGAGCCTGATCCTGATTCAGGCGACGCGAACGATTTTCGGCGCGCAGAACGTGCAAGTCGTCAATCCGTCCT GGATGAGCGGCGGCGTGACCGTGATGCAGAACCTGATCCTGCCGTACAACCGCCTCGCGATCCTCGCGTTCGCGCTCGCC GTCGTCGGCGTCGCGTGGGCGGTGTTGACGAAGACGCGCCTCGGCCTGTTCGTGCGCGCGGTCACGCAGAACCGCCGGAT GGCCGCCTGCGTCGGCGTGAAGACGGCGCGTGTCGATTCGTATGCGTTCGCGTTCGGCGCGGGCATCGCGGGGCTCGGCG GCTGCGCGCTATCGCAGATCGGCAACGTCGGCCCGGATCTCGGCCAGAGCTACATCATCGATTCGTTCATGGCGGTCGTG CTGGGCGGCGTGGGCCAGATCGCGGGCACGGTGCTCGGCGGCTTCGGGCTCGGGCTCGTCAGCAAGGCGATCGAGCCGTT CTGGGGCGCGGTGCTCGCGAAGATCGCGGTGCTCGTGATGATCGTGCTGTTCATCCAGAAACGCCCGCAAGGGATGTTCG CCCTGAAGGGCCGCAGCGCGGAGGCGTGA
Upstream 100 bases:
>100_bases CGCTCGCCTGACGTCCGTGCGGACGCCGCGCGAGCGCGCGGCGCCGTCATCGCGCGCGGCCGCGCCGCGCGCCTTCTTCT CCTTTCACGAGGACATACCG
Downstream 100 bases:
>100_bases CATGACTTCGACAATCCGTTCTTCCCTTGCCGTCGCGCGCGGCGCGTCGCCCGCTTCATCCACGGCATCCGCCGCATCCG CTTCACCCGCCGCGCCGCGC
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein H [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MPTPLSRAARALAALAVCAALSLGAPSAAHAVTAADVAALAGDDFDAKSAAIDHLAAERDAAAAALLNALANGDALATDA GRILVQHGDAARDALTNAPAQAGDAQPVMLNNLLRTKIANALSGLDLASPAIDTRRRAIDALLKSPDAALKPMIDAARAK ETDPVLKRRLDALWAIAALRDADPAKRLEAVRLVAARSDLDMIEQLRPLVAKRSDGSDAEPDARVREAAQHGLDALYAIQ RRGEIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLA AAALGVVLERTVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNLILPYNRLAILAFALA VVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQSYIIDSFMAVV LGGVGQIAGTVLGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA
Sequences:
>Translated_542_residues MPTPLSRAARALAALAVCAALSLGAPSAAHAVTAADVAALAGDDFDAKSAAIDHLAAERDAAAAALLNALANGDALATDA GRILVQHGDAARDALTNAPAQAGDAQPVMLNNLLRTKIANALSGLDLASPAIDTRRRAIDALLKSPDAALKPMIDAARAK ETDPVLKRRLDALWAIAALRDADPAKRLEAVRLVAARSDLDMIEQLRPLVAKRSDGSDAEPDARVREAAQHGLDALYAIQ RRGEIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLA AAALGVVLERTVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNLILPYNRLAILAFALA VVGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQSYIIDSFMAVV LGGVGQIAGTVLGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA >Mature_541_residues PTPLSRAARALAALAVCAALSLGAPSAAHAVTAADVAALAGDDFDAKSAAIDHLAAERDAAAAALLNALANGDALATDAG RILVQHGDAARDALTNAPAQAGDAQPVMLNNLLRTKIANALSGLDLASPAIDTRRRAIDALLKSPDAALKPMIDAARAKE TDPVLKRRLDALWAIAALRDADPAKRLEAVRLVAARSDLDMIEQLRPLVAKRSDGSDAEPDARVREAAQHGLDALYAIQR RGEIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLVQRYLPGAFDWYPLAAIPASFLAA AALGVVLERTVLRHLYGRPLETLLATFGVSLILIQATRTIFGAQNVQVVNPSWMSGGVTVMQNLILPYNRLAILAFALAV VGVAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQSYIIDSFMAVVL GGVGQIAGTVLGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSAEA
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=312, Percent_Identity=28.525641025641, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 56335; Mature: 56204
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLSRAARALAALAVCAALSLGAPSAAHAVTAADVAALAGDDFDAKSAAIDHLAAERD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AAAAALLNALANGDALATDAGRILVQHGDAARDALTNAPAQAGDAQPVMLNNLLRTKIAN HHHHHHHHHHHCCCCEECCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH ALSGLDLASPAIDTRRRAIDALLKSPDAALKPMIDAARAKETDPVLKRRLDALWAIAALR HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH DADPAKRLEAVRLVAARSDLDMIEQLRPLVAKRSDGSDAEPDARVREAAQHGLDALYAIQ CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RRGEIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLVQR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH YLPGAFDWYPLAAIPASFLAAAALGVVLERTVLRHLYGRPLETLLATFGVSLILIQATRT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IFGAQNVQVVNPSWMSGGVTVMQNLILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRA HHCCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQSYIIDSFMAVV HHCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LGGVGQIAGTVLGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC EA CC >Mature Secondary Structure PTPLSRAARALAALAVCAALSLGAPSAAHAVTAADVAALAGDDFDAKSAAIDHLAAERD CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AAAAALLNALANGDALATDAGRILVQHGDAARDALTNAPAQAGDAQPVMLNNLLRTKIAN HHHHHHHHHHHCCCCEECCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH ALSGLDLASPAIDTRRRAIDALLKSPDAALKPMIDAARAKETDPVLKRRLDALWAIAALR HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH DADPAKRLEAVRLVAARSDLDMIEQLRPLVAKRSDGSDAEPDARVREAAQHGLDALYAIQ CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RRGEIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQTLVQR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH YLPGAFDWYPLAAIPASFLAAAALGVVLERTVLRHLYGRPLETLLATFGVSLILIQATRT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IFGAQNVQVVNPSWMSGGVTVMQNLILPYNRLAILAFALAVVGVAWAVLTKTRLGLFVRA HHCCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQSYIIDSFMAVV HHCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LGGVGQIAGTVLGGFGLGLVSKAIEPFWGAVLAKIAVLVMIVLFIQKRPQGMFALKGRSA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]