Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

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The map label for this gene is yejA [C]

Identifier: 83719183

GI number: 83719183

Start: 2242670

End: 2244730

Strand: Direct

Name: yejA [C]

Synonym: BTH_I1978

Alternate gene names: 83719183

Gene position: 2242670-2244730 (Clockwise)

Preceding gene: 83719435

Following gene: 83720535

Centisome position: 58.88

GC content: 68.8

Gene sequence:

>2061_bases
GTGTGGCGTCCGCGCCCGCATGGTCGGCAGGCGGCGGCTGGCTGTAACCGGTTGCGAATGGGTAGAATTCTCTCACATCG
CCATCCTCGAACGACTGCCGACACCTCCATGACGATCGGTTCGCCCCGGGCCCGCCGGCCGCGACCGCCGCGACGCGCGG
CGACATCACAACAGGCCGCGCAAGCCCCCGCGCCGCAACGGGCGGCCCGCGCGCGCGCCGCGCTCGCGCGCTTTGCACGC
CGCACGGCGGCGCTCGTCGCGCTCGCGCTCGCCGCGGCGCCGGCGGCCCACGCCGTCTATGCGATCGCGCAGTACGGCGA
GCCCAAGTATCCGCCCGGCTTCAAGCATTTCGACTACGTGAACCCGGACGCGCCGAAGGGCGGCACGCTCGTGCTCGCGA
ACCCGAACCGGCTCACGACGTTCGACAAGTTCAATCCGTTCACGATGCGCGGCAATCCGGCGCCCGGGATCGACCTGCTG
TTCGAGAGCCTGACGACGGGCAGCGCCGACGAACCCGCCTCCGCGTACGGGCTGCTCGCGGACGACATCGCCATCGCGCC
CGACGGGCTGTCGGTCACGTTCCATTTGAACCCGCGCGCGCGCTTCTCGAACGGCGATCCCGTTACCGCAGCGGACGTCA
AGCATTCGTTCGATACGCTGAAGAGCCCGCAGGCGGCGCCGCAATACCCGGCGTACTACGCGGACATCACGCGCGCGGTG
ATCGTCAATCCGGAGACCGTGCGCTTCGAGTTTCGCCGCAAGAACCGGGAGCTGCCGCTGATCGCGGGCGGCATCCCGGT
GTTCTCGAGCAAATGGGGCCTGCGGCCGGACGGTTCGCGCATCCCGTTCGACCAGCTCGCGTTCGAGCAGCCGATCGGCA
GCGGCCCGTACCTGATCGAGCGCTACGACACCGGCCGCACGATTACCTACCGGCGCAATCCCGCCTACTGGGGCGTGTCG
CTGCCCGTGCGGATCGGCACGAACAACTTCGAGCGCATCGTCTACAAGCTGTACGGCGACGGCGTCGCGCGGCTCGAGGC
GTTCAAGGCGGGCGAATACGACGTGCTCGTCGAGTACATCGCGCGCAACTGGGTTCGGCGCGATGTCGGCAAGCGCTTCG
ACAGCGGCGAGCTCGTCAAGCGCGAGTTCCGCCAGCACAACGGCGCGGGCATGCAGGGCTTCTTCATGAATCTGCGGCGG
CCGTTGTTCCAGGACGTGCGCGTGCGCCACGCGCTCGATCTCGCGTTCGATTTCGAGTGGCTGAACCGGCAACTCTTCTA
TGGCGCCTACACGCGTCTGAACAGCTACTTCGCCGATACCGACCTGCAGGCGACGGGCATGCCGGGCGCGGGCGAGCTCG
CGCTGCTCAATCCGTTGCGCGCGCAGCTCGACGCGGCCGTGTTCGGGCCGATGACCGTGCAGCCGAGCACCGATCCGCCC
GCGTCGCTGCGCGCGAACCTGCTGAAGGCGCGCGCGCTGCTCGCCGATGCCGGCTGGACCTACCGCGACGGCGCGCTGCG
CAACGCGAAGGGCGAGCCGTTCGTGTTCGAGATCCTCGACGATTCGGGCTCGGCGTTCGAGGCGGTCGCCGCCGCGTACA
TCCGCAATCTCGCGAAGCTCGGGATCGTCGCGAAATACCGGACGGCCGATTTCGCGCTGCTGCAAAAGCGTCTCGACGCG
TTCGACTACGACGTGACGACGGTTCGCTACCCGGGCGTCCAGGTGCCGGGCGCCGAGCAGGTCGCGCGCTTCGCGAGCCG
CTACGCGGACGAGCAGGGCTCGGACAACCTGATCGGGCTCAAGTCGCCCGCGGTCGATGCGATCCTGAAGGCGCTCACGC
AGGCCGAGACGCGTCAGGAACTGCTCGACGCGACGCACGCGCTCGACCGCGTGCTGATGCACGGCTACTATGCGGTGCCG
CAGTGGTACAGCGCGACGCACCGGATCGCGTTCAAGCGCACGCTTGCCTATCCGTCGACGCTGCCGCTGTACTATTCGGC
GGAAGGCTGGGTTGTGTCGACGTGGTGGGCGAAGCCCGAGCATGGCACCCCCGCGCGTTAG

Upstream 100 bases:

>100_bases
GCTTGCACGCCTTGGCGATGCCGTAAGCGATCGAACGGTTCGACAAGAGGCCCGTCAGCAGAATGCGTTTACCATCGAGA
AAGCCCATGAATTCTCCTAT

Downstream 100 bases:

>100_bases
CCCGGCCGCGCGGATCGCGCACGCCTTGAAGTGCGGCGCGAAGTGCGAAGCGACGAGCGGCCGTCCTGCGCCGCGCCGAT
TGACGAAACCGTTCGAACAC

Product: ABC transporter periplasmic substrate-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAAQAPAPQRAARARAALARFAR
RTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLL
FESLTTGSADEPASAYGLLADDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV
IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIERYDTGRTITYRRNPAYWGVS
LPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRR
PLFQDVRVRHALDLAFDFEWLNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP
ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKLGIVAKYRTADFALLQKRLDA
FDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGLKSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVP
QWYSATHRIAFKRTLAYPSTLPLYYSAEGWVVSTWWAKPEHGTPAR

Sequences:

>Translated_686_residues
MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAAQAPAPQRAARARAALARFAR
RTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLL
FESLTTGSADEPASAYGLLADDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV
IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIERYDTGRTITYRRNPAYWGVS
LPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRR
PLFQDVRVRHALDLAFDFEWLNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP
ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKLGIVAKYRTADFALLQKRLDA
FDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGLKSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVP
QWYSATHRIAFKRTLAYPSTLPLYYSAEGWVVSTWWAKPEHGTPAR
>Mature_686_residues
MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAAQAPAPQRAARARAALARFAR
RTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLL
FESLTTGSADEPASAYGLLADDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV
IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIERYDTGRTITYRRNPAYWGVS
LPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRR
PLFQDVRVRHALDLAFDFEWLNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP
ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKLGIVAKYRTADFALLQKRLDA
FDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGLKSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVP
QWYSATHRIAFKRTLAYPSTLPLYYSAEGWVVSTWWAKPEHGTPAR

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=586, Percent_Identity=37.3720136518771, Blast_Score=361, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 76107; Mature: 76107

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS01310 FXYD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH
QAPAPQRAARARAALARFARRTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC
NPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLLFESLTTGSADEPASAYGLLA
CCCCCCCCEEEEECCCCCCEECCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCHHHCEEE
DDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV
CCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEE
IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIE
EECCHHEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEE
RYDTGRTITYRRNPAYWGVSLPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYI
EECCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
ARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRRPLFQDVRVRHALDLAFDFEW
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH
LNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP
HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHCCCEEECCCCCCC
ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKL
HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
GIVAKYRTADFALLQKRLDAFDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGL
CCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEC
KSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVPQWYSATHRIAFKRTLAYPST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCC
LPLYYSAEGWVVSTWWAKPEHGTPAR
CCEEECCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MWRPRPHGRQAAAGCNRLRMGRILSHRHPRTTADTSMTIGSPRARRPRPPRRAATSQQAA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH
QAPAPQRAARARAALARFARRTAALVALALAAAPAAHAVYAIAQYGEPKYPPGFKHFDYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC
NPDAPKGGTLVLANPNRLTTFDKFNPFTMRGNPAPGIDLLFESLTTGSADEPASAYGLLA
CCCCCCCCEEEEECCCCCCEECCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCHHHCEEE
DDIAIAPDGLSVTFHLNPRARFSNGDPVTAADVKHSFDTLKSPQAAPQYPAYYADITRAV
CCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEE
IVNPETVRFEFRRKNRELPLIAGGIPVFSSKWGLRPDGSRIPFDQLAFEQPIGSGPYLIE
EECCHHEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEE
RYDTGRTITYRRNPAYWGVSLPVRIGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYI
EECCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
ARNWVRRDVGKRFDSGELVKREFRQHNGAGMQGFFMNLRRPLFQDVRVRHALDLAFDFEW
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH
LNRQLFYGAYTRLNSYFADTDLQATGMPGAGELALLNPLRAQLDAAVFGPMTVQPSTDPP
HHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHCCCEEECCCCCCC
ASLRANLLKARALLADAGWTYRDGALRNAKGEPFVFEILDDSGSAFEAVAAAYIRNLAKL
HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
GIVAKYRTADFALLQKRLDAFDYDVTTVRYPGVQVPGAEQVARFASRYADEQGSDNLIGL
CCEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEC
KSPAVDAILKALTQAETRQELLDATHALDRVLMHGYYAVPQWYSATHRIAFKRTLAYPST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCC
LPLYYSAEGWVVSTWWAKPEHGTPAR
CCEEECCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]