| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yigA [C]
Identifier: 83719150
GI number: 83719150
Start: 202015
End: 202767
Strand: Reverse
Name: yigA [C]
Synonym: BTH_I0171
Alternate gene names: 83719150
Gene position: 202767-202015 (Counterclockwise)
Preceding gene: 83719190
Following gene: 83720176
Centisome position: 5.32
GC content: 69.85
Gene sequence:
>753_bases TTGCAGCCTGACCTTTCATTTGCCGAAGCCGAACGAAGCGCCATGAACGATCGCGAAGTCGCCGACTACCTGCTCGCCAA CCCCGAATTCTTCGCCCAGCACGCGGAGCTGCTCGCGACGATCAAGCTCGCGAATCCGCATGGCAAGGCCGCTGTGTCGC TTCAGGAGCGGCAGATGGAGATGTTGCGCGACAAGAACAAGCATCTCGAACGCCGGCTCGCCGAGCTGCTGCGCTACGGC CACGAGAACGACGGGCTCGCCGCGAAGTTCAACCGCTGGACCGCGCGCGTGATCGCCGAGCGCGATCCGTACGCGCTGCC GCGTGCGATCGCGGGCGGCCTCGCCGACGCGTTCGACGTCCCGCAGACTGCGCTCAGGCTCTGGGACGTCGCCGAAACCT ACGCGCAAGCCGATTTCGCGCGCAACGTCGGCGAGGAGGTGCGCCTCTTCACGAACAGCCTTGCGACCCCATATTGCGGC GCGAACACCGGATTCGAGGCGGCGCAGTGGCTCGCGCCCGTCACGGCCGCGACGGCCGGCGACGGCGAGGCACCGGCGGC AAGCGGCGCCGCCGAATCGGTCGCGCTGATCGCGCTGCGCGCCCCCGACGCGGGCGAAGGCGCGGGCGCGTTCGGCCTGC TGGTGCTGGGCTCGCCGGACCCGCGACGCTTCCACGACGGCATGGGCACCGACTTCCTCACGCAGATCGGCACGCTCGCG AGCGCGGCGCTCACGCGCCTGCTGCCGCACTGA
Upstream 100 bases:
>100_bases ATCTCGTGGGACGGCGCGCGCGACGAACGCGCGCCGCTCATGATGGCCGGCCCCGCGACGACCGTCTTCGAAGGCGTGAT CGACCTGCCCGCCTGACCTT
Downstream 100 bases:
>100_bases CGGCCGCGCGCCGATCGCCGCCCCGCGCCATGACCACCGATCCGATCGCCGACTACCTGTCGAATCTGCGGCACGTGAGG AAGCTGTCGGATCACACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLRDKNKHLERRLAELLRYG HENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCG ANTGFEAAQWLAPVTAATAGDGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA SAALTRLLPH
Sequences:
>Translated_250_residues MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLRDKNKHLERRLAELLRYG HENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCG ANTGFEAAQWLAPVTAATAGDGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA SAALTRLLPH >Mature_250_residues MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLRDKNKHLERRLAELLRYG HENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCG ANTGFEAAQWLAPVTAATAGDGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA SAALTRLLPH
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26869; Mature: 26869
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQME CCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH MLRDKNKHLERRLAELLRYGHENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDV HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC PQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEAAQWLAPVTAATAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC DGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHH SAALTRLLPH HHHHHHHCCC >Mature Secondary Structure MQPDLSFAEAERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQME CCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH MLRDKNKHLERRLAELLRYGHENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADAFDV HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC PQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEAAQWLAPVTAATAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC DGEAPAASGAAESVALIALRAPDAGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLA CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHH SAALTRLLPH HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA