Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

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The map label for this gene is kdgK [H]

Identifier: 83719128

GI number: 83719128

Start: 2587592

End: 2588581

Strand: Direct

Name: kdgK [H]

Synonym: BTH_I2296

Alternate gene names: 83719128

Gene position: 2587592-2588581 (Clockwise)

Preceding gene: 83719100

Following gene: 83719833

Centisome position: 67.93

GC content: 71.92

Gene sequence:

>990_bases
ATGCAAGTCCCGCTCGACGTCGTTACCTATGGCGAAGCAATGGCGATGTTCGTCGCCGCCGAACCCGGCCCGCTCGACTG
CGCGACGCAATTCATGAAGCGCATCGCGGGCGCCGACCTGAACGTCGCGATCGGCCTGGCGCGCCTCGGTTTCCGGGTCG
GCTGGGTGAGCCGCGTCGGCGCCGATTCGTTCGGCCGCTACGTGCTCGACACGCTCGCGCGCGAACGTGTCGACGCATCG
TGCGTGACGGTCGACGCGCGCTATCCGACGGGCTTCCAGCTGAAGTCGCGCGCGACCGGCGGCGCGGACCCGGCCGTCGA
GTATTTCCGCAAGGGCTCGGCCGCGAGCCGCCTGTCGCTCGACGACTACGCGCCCGATTACGTGCTCGGCGCGCGCCATC
TGCACCTGACGGGCGTCGCGCCCGCGCTGTCCGATTCGTCGCGCGAGCTCGCGTTCCATCTCGCGCGCGAGATGCGCGCG
GCGGGCAAGACGGTGTCGTTCGACCCGAACCTGCGGCCGACGCTGTGGCCGTCGCCGGAAGCGATGGCGCGCGCGCTGAA
CGCGCTCGCCGAGCACGCGGACTGGGTGCTGCCCGGGCTCGGCGAAGGGCGGCAACTGACGGGCCTGGATACGCCCGCCG
ACATCGCGCGCTTCTACCTCGGGCAGGGTGCGCGCGGCGTGATCGTCAAGCTCGGCGCGGCGGGCGCGTACTTTCGCACG
GCCGACGGCCGCGAGGGCACGGTCGCGGCCGAGCGCGTCGAGCACGTCGTCGACACGGTCGGCGCGGGCGACGGCTTCGC
GGTCGGCGCGGTGAGCGCGCTGCTCGAAGGCCGTGCGATCGACGACGCGGTGGCGCGCGGCAACCGGATCGGCGCGCTCG
CGATCCAGGTGATCGGCGACTCGGAAGGACTGCCGACGCGCGCGGCACTCGATCGAATCGAAAATCTGAGCAATGCGCGC
GATCGCCTAGAGGCGCCGCTCGCGCGATAA

Upstream 100 bases:

>100_bases
TCGCGGCCGCATGAAACCCACCCGCCGGCGCCCGGCTCGGCTAAGCTCGACGCTTGCCGCCCCGACGCCCAGCCCTTGAT
CGAAGGAGTCAGCCCACACC

Downstream 100 bases:

>100_bases
ACCGCCTGTCCCGACGCAGGACGGGCACAATCGCGGCGAATCCCGCGTTTCATACGGCGCCGCTCGACACAGGAGACACA
CATCATGTCCGCAACGCTTG

Product: 2-dehydro-3-deoxygluconokinase

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVGADSFGRYVLDTLARERVDAS
CVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSLDDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRA
AGKTVSFDPNLRPTLWPSPEAMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT
ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGDSEGLPTRAALDRIENLSNAR
DRLEAPLAR

Sequences:

>Translated_329_residues
MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVGADSFGRYVLDTLARERVDAS
CVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSLDDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRA
AGKTVSFDPNLRPTLWPSPEAMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT
ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGDSEGLPTRAALDRIENLSNAR
DRLEAPLAR
>Mature_329_residues
MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVGADSFGRYVLDTLARERVDAS
CVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSLDDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRA
AGKTVSFDPNLRPTLWPSPEAMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT
ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGDSEGLPTRAALDRIENLSNAR
DRLEAPLAR

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=320, Percent_Identity=27.1875, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI87082281, Length=283, Percent_Identity=31.095406360424, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 34772; Mature: 34772

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVG
CCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
ADSFGRYVLDTLARERVDASCVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSL
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCC
DDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRAAGKTVSFDPNLRPTLWPSPE
CCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH
AMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT
HHHHHHHHHHHHCCEECCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEC
ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGD
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEC
SEGLPTRAALDRIENLSNARDRLEAPLAR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQVPLDVVTYGEAMAMFVAAEPGPLDCATQFMKRIAGADLNVAIGLARLGFRVGWVSRVG
CCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
ADSFGRYVLDTLARERVDASCVTVDARYPTGFQLKSRATGGADPAVEYFRKGSAASRLSL
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCC
DDYAPDYVLGARHLHLTGVAPALSDSSRELAFHLAREMRAAGKTVSFDPNLRPTLWPSPE
CCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH
AMARALNALAEHADWVLPGLGEGRQLTGLDTPADIARFYLGQGARGVIVKLGAAGAYFRT
HHHHHHHHHHHHCCEECCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEC
ADGREGTVAAERVEHVVDTVGAGDGFAVGAVSALLEGRAIDDAVARGNRIGALAIQVIGD
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEEEC
SEGLPTRAALDRIENLSNARDRLEAPLAR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]