| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yfbI [C]
Identifier: 83719081
GI number: 83719081
Start: 1175761
End: 1177671
Strand: Reverse
Name: yfbI [C]
Synonym: BTH_I1034
Alternate gene names: 83719081
Gene position: 1177671-1175761 (Counterclockwise)
Preceding gene: 83718593
Following gene: 83719080
Centisome position: 30.92
GC content: 71.32
Gene sequence:
>1911_bases ATGCAGGGAAATGCCTCGCCCGGCGGCCGGCGCACGCCCGCTTCGGCGCATCGCGCCGGCTCGCCCGACAATCACTCGCA CTCGCCGCCCGCCGTGGCGCTCGCGGCCGCCGCGCCCGGCGCCGCGGGAACGGCCGGCGAGCGCGCCGCCGGATCGGGCG GCGCGGATGCAATCCGCACGCCGCTCGCCGGATTGCGCGTGTGGCTCGTCGCCGCGGCCGTGCTTTGCGCGTACCTGTTG CCGGGCATCCTCGGCCACGATCCGTGGAAGCAGGATGAAACCTACACGTTCGGCATCATCCAACACATGCTCGAAAGCGG CGACTTCGTCGTGCCGACCAACGCGGGGCAGCCGTTCCTCGAAAAACCACCGCTGTACGACTGGGTCGCCGCCGGCCTCG CGTGGCTCTTTTCCCGCTACCTGCCGCTGCACGACGCCGCACGGCTCGCGAGCGCCCTCTTCGCCGCGCTCGCGTTCGGC TTCACCGCGCGCGCCGCGCGCATCGCGACCGGCGCCGCGCGCTGGCTCGAACTGCCGGTGATCGGCACCGTCGCGCTGTG CGCGGGCTCGCTCGTCGTTATCAAGCATTCTCACGACCTGATGACCGACGTCGCGCTGATGGCGGGCACCGCGATGGGCT TTTGCGGGCTGCTCGAACTCGTGATCCGGCACGCCGGCGGCGCGAGCCGCGCCGCCCCCGGCCGGCAGCCCGCGAGCCGC TGCGCGGCCCCCCTGTTCGGGCTGGGCGTCGGCGTCGCGCTGATGTCGAAGGGCCTGTTCGTGCCGCTCGTGTTCGGCGC GACGCTCGCCGCAACGCTCGTTCTCTACCCGACCTGCCGCAGCCGCGCGTTCTTCCGCTCGCTCGCGATCGCCGCGCTCG TGTGCGCGCCGTTCGCGCTGATCTGGCCGACCGCGCTGTTCCTGCGCTCCGAATCGCTGTTCCTCGTCTGGTTCTGGGAA AACAACGTCGGCCGCTTCTTCGGTTTCTCGGTGCCGACGCTCGGCGCCGAAAACGACAAGCCGCTCTTCATCTGGCGCGC GCTGCTGACGCTCGGCTTTCCGGTCGCCCCGCTCGCGCTCGTCGCGCTCGCGCGCAGCCTCTGGCGCGACTGGCGCGCGC CGCACGTCGCGCTGCCGCTCGCGTTCGCGGGCGTCGGGATGGTCGTGCTGCACATCTCAGCGACGTCGCGCCAGTTGTAC ATCCTGCCGTTCATCGCGCCGCTCGCGCTCGTCGCCGCGCAAGCGATCCCGCGCCTGCCGCAGCGACTGCATACCGCGTG GGACCATGCGAGCCGGCTGCTGTTCGGCACGGCCGCGGCGCTCGTGTGGATCGTCTGGTCGCTGATGTCCGATCGCAACG GTCCGCGCGTCGGCTTGCAATGGCTCGGCCGCTGGCTGCCGCTCGACTGGACGATGCCGATCGAGCCCGCGCTCGTGCTG TCCGCGCTCGCGATCACGATCGGCTGGGTTGGCCTGATGCCGTCGCTGCGGCTTGCGGGCAAGTGGCGCGGCGCGCTGTC GTGGGCGATGGGCGCGCTCGTCGCGTGGGGGCTCGTCTACACGCTGCTGCTGCCGTGGCTCGACGTCGCGAAGAGCTATC GTTCGGTGTTCGAAGATTTGAATCGCCGGCTCGCGCTCGAATGGAACGACGGCGACTGCATGGCGAGCGTCAATCTCGGC GAATCGGAAGCGCCGATGCTCTACTACTTCTCCGGCGTGCTGCACCAGCCCGTCGTCCGGCCGAACGCGAGCGCCTGCAC GTGGCTCATCGTGCAGGGCACGCGTGCGAACCCGCCCGCGCTCGACGTCGAATGGAAGCCCTTCTGGGCAGGCGCCCGGC CGGGCGACGATCAGGAAATGCTGCGCGTCTACGTGCGCACGCCGGCCGCGGCCGCCATCGCCCGTCCTTGA
Upstream 100 bases:
>100_bases AACTGCGGCGAACGCCGCGCATACCGCTCCCGCCCGCTCGCGGCCCGAAATCGGCCGGGCCCACGCAGTCCGGCCGCCAC ACACGAAGAGATCACCCAGC
Downstream 100 bases:
>100_bases CGCCCGCCGCGCGACGGCCCAAGCCGTCGCGCAGGGTCTTTTCCCGGCGAGCAAGCGCGGCACTCGCCGTCGCCGGTTCG CGCCGGCTCTCGTGCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Inner Membrane Protein; 4-Amino-4-Deoxy-L-Arabinose Transferase; Inner Membrane Transmembrane Protein; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MQGNASPGGRRTPASAHRAGSPDNHSHSPPAVALAAAAPGAAGTAGERAAGSGGADAIRTPLAGLRVWLVAAAVLCAYLL PGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLEKPPLYDWVAAGLAWLFSRYLPLHDAARLASALFAALAFG FTARAARIATGAARWLELPVIGTVALCAGSLVVIKHSHDLMTDVALMAGTAMGFCGLLELVIRHAGGASRAAPGRQPASR CAAPLFGLGVGVALMSKGLFVPLVFGATLAATLVLYPTCRSRAFFRSLAIAALVCAPFALIWPTALFLRSESLFLVWFWE NNVGRFFGFSVPTLGAENDKPLFIWRALLTLGFPVAPLALVALARSLWRDWRAPHVALPLAFAGVGMVVLHISATSRQLY ILPFIAPLALVAAQAIPRLPQRLHTAWDHASRLLFGTAAALVWIVWSLMSDRNGPRVGLQWLGRWLPLDWTMPIEPALVL SALAITIGWVGLMPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLNRRLALEWNDGDCMASVNLG ESEAPMLYYFSGVLHQPVVRPNASACTWLIVQGTRANPPALDVEWKPFWAGARPGDDQEMLRVYVRTPAAAAIARP
Sequences:
>Translated_636_residues MQGNASPGGRRTPASAHRAGSPDNHSHSPPAVALAAAAPGAAGTAGERAAGSGGADAIRTPLAGLRVWLVAAAVLCAYLL PGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLEKPPLYDWVAAGLAWLFSRYLPLHDAARLASALFAALAFG FTARAARIATGAARWLELPVIGTVALCAGSLVVIKHSHDLMTDVALMAGTAMGFCGLLELVIRHAGGASRAAPGRQPASR CAAPLFGLGVGVALMSKGLFVPLVFGATLAATLVLYPTCRSRAFFRSLAIAALVCAPFALIWPTALFLRSESLFLVWFWE NNVGRFFGFSVPTLGAENDKPLFIWRALLTLGFPVAPLALVALARSLWRDWRAPHVALPLAFAGVGMVVLHISATSRQLY ILPFIAPLALVAAQAIPRLPQRLHTAWDHASRLLFGTAAALVWIVWSLMSDRNGPRVGLQWLGRWLPLDWTMPIEPALVL SALAITIGWVGLMPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLNRRLALEWNDGDCMASVNLG ESEAPMLYYFSGVLHQPVVRPNASACTWLIVQGTRANPPALDVEWKPFWAGARPGDDQEMLRVYVRTPAAAAIARP >Mature_636_residues MQGNASPGGRRTPASAHRAGSPDNHSHSPPAVALAAAAPGAAGTAGERAAGSGGADAIRTPLAGLRVWLVAAAVLCAYLL PGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLEKPPLYDWVAAGLAWLFSRYLPLHDAARLASALFAALAFG FTARAARIATGAARWLELPVIGTVALCAGSLVVIKHSHDLMTDVALMAGTAMGFCGLLELVIRHAGGASRAAPGRQPASR CAAPLFGLGVGVALMSKGLFVPLVFGATLAATLVLYPTCRSRAFFRSLAIAALVCAPFALIWPTALFLRSESLFLVWFWE NNVGRFFGFSVPTLGAENDKPLFIWRALLTLGFPVAPLALVALARSLWRDWRAPHVALPLAFAGVGMVVLHISATSRQLY ILPFIAPLALVAAQAIPRLPQRLHTAWDHASRLLFGTAAALVWIVWSLMSDRNGPRVGLQWLGRWLPLDWTMPIEPALVL SALAITIGWVGLMPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLNRRLALEWNDGDCMASVNLG ESEAPMLYYFSGVLHQPVVRPNASACTWLIVQGTRANPPALDVEWKPFWAGARPGDDQEMLRVYVRTPAAAAIARP
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68222; Mature: 68222
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGNASPGGRRTPASAHRAGSPDNHSHSPPAVALAAAAPGAAGTAGERAAGSGGADAIRT CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH PLAGLRVWLVAAAVLCAYLLPGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC EKPPLYDWVAAGLAWLFSRYLPLHDAARLASALFAALAFGFTARAARIATGAARWLELPV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH IGTVALCAGSLVVIKHSHDLMTDVALMAGTAMGFCGLLELVIRHAGGASRAAPGRQPASR HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH CAAPLFGLGVGVALMSKGLFVPLVFGATLAATLVLYPTCRSRAFFRSLAIAALVCAPFAL HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWPTALFLRSESLFLVWFWENNVGRFFGFSVPTLGAENDKPLFIWRALLTLGFPVAPLAL HHHHHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH VALARSLWRDWRAPHVALPLAFAGVGMVVLHISATSRQLYILPFIAPLALVAAQAIPRLP HHHHHHHHHHHCCCCEEHHHHHHHHCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHH QRLHTAWDHASRLLFGTAAALVWIVWSLMSDRNGPRVGLQWLGRWLPLDWTMPIEPALVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHH SALAITIGWVGLMPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRRLALEWNDGDCMASVNLGESEAPMLYYFSGVLHQPVVRPNASACTWLIVQGTRANPPA CCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCE LDVEWKPFWAGARPGDDQEMLRVYVRTPAAAAIARP ECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MQGNASPGGRRTPASAHRAGSPDNHSHSPPAVALAAAAPGAAGTAGERAAGSGGADAIRT CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH PLAGLRVWLVAAAVLCAYLLPGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC EKPPLYDWVAAGLAWLFSRYLPLHDAARLASALFAALAFGFTARAARIATGAARWLELPV CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH IGTVALCAGSLVVIKHSHDLMTDVALMAGTAMGFCGLLELVIRHAGGASRAAPGRQPASR HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH CAAPLFGLGVGVALMSKGLFVPLVFGATLAATLVLYPTCRSRAFFRSLAIAALVCAPFAL HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWPTALFLRSESLFLVWFWENNVGRFFGFSVPTLGAENDKPLFIWRALLTLGFPVAPLAL HHHHHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH VALARSLWRDWRAPHVALPLAFAGVGMVVLHISATSRQLYILPFIAPLALVAAQAIPRLP HHHHHHHHHHHCCCCEEHHHHHHHHCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHH QRLHTAWDHASRLLFGTAAALVWIVWSLMSDRNGPRVGLQWLGRWLPLDWTMPIEPALVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHH SALAITIGWVGLMPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRRLALEWNDGDCMASVNLGESEAPMLYYFSGVLHQPVVRPNASACTWLIVQGTRANPPA CCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCE LDVEWKPFWAGARPGDDQEMLRVYVRTPAAAAIARP ECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA