| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yjeS [H]
Identifier: 83719067
GI number: 83719067
Start: 833415
End: 834644
Strand: Direct
Name: yjeS [H]
Synonym: BTH_I0724
Alternate gene names: 83719067
Gene position: 833415-834644 (Clockwise)
Preceding gene: 83718434
Following gene: 83721435
Centisome position: 21.88
GC content: 70.65
Gene sequence:
>1230_bases ATGAACCGAATTCCGGAACTCGCAGTCGCAGACGCGCGCCCCTCGCAGGATGGGCGCGCGGCGCCGTCTCGCCTTGACGA TGCGAGGCTCGCGGAGCTCGCGTCGCGCATCAAGGCCTGGGGGCGCGAATTGGGTTTCGGGGCGATCGGCATCAGCGATA CCGATCTCTCGGATGCCGAAGCGGGGCTCGCCGCCTGGCTGGAAGCCGGATGCCACGGCGAAATGGATTATATGGCCAAA CATGGGATGAAACGCGCGCGGCCGGCCGAACTTGTGGCCGGCACGCGACGCGTGATCTCCGCGCGGCTCGCGTACCTGCC CGCCGAAACGCTCGGCGACGCGCTCGATTCGGGTGGCGCGCGGCGCGACTGGCGCGCGCGCGAGGCGGCGCGCATCGCCG ATCCGCAGGCGGCCGTCGTGTCCGTCTACGCGCGCGGCCGCGACTATCACAAGGTGTTGCGCAACCGCCTGCAGACGCTC GCCGAGCGGATCGAGGCCGAGATCGGCGCGTTCGGCCATCGCGTGTTTACCGATTCGGCGCCCGTGCTCGAAGTCGAGCT CGCCCAGAAGGCGGGCGTCGGCTGGCGCGGCAAGCACACGCTGTTGTTGCAGCGCGACGCGGGCTCGTTTTTCTTCCTGG GCGAAATCTACGTCGACGTGCCGCTGCCGACCGACGCGCAGACGTCGCCGGACGCCGCGCCCGAGACGCCCGGCGCACAT TGCGGCAGTTGCGCGCGCTGCATCGGCGCGTGCCCGACGGGCGCGATCGTCGCGCCGTACCGTGTCGACGCGCGGCGCTG CATCTCGTATCTGACGATCGAATTACACGGCAGCATCCCCGAGCCGCTGCGGCCCCTCATCGGCAATCGCGTGTACGGCT GCGACGACTGTCAGCTCGTCTGCCCCTGGAACAAGTTCGCGCAGGCGGCGCCCGTCGCCGATTTCGACGTGCGGCACGGG CTCGATCGCGCGTCGCTCGTCGAGTTGTTCGAATGGACGGCCGAGCAATTCGACGAGCGGATGCAAGGCAGTGCGATTCG CCGGATCGGCTACGAGCGCTGGCTGCGCAATCTCGCGGTCGGCCTCGGCAACGCGCTGCGCGCCGCGCCCGGCCGCATCG AGCCCGGCGCGCGCGCGGCGATCGTCGCGGCGCTGCATGCGCGTTTGGGCGACCCGTCCGTGTCCGCGCTCGTGCGCGAG CACGTCGAGTGGGCGCTGCGCGCCGCCTGA
Upstream 100 bases:
>100_bases TCGTCGGCGAGCGCGAGCGTGTGCTCGGCAAGCGGAGCGGGCAGGAGGGGCGCGGCGTGCGCGTGGCTAGGCTGCTCGGG CATTCTCGTAAAATAGAGCG
Downstream 100 bases:
>100_bases AGGCGGCGTAAAGTGGCGGTTTGGCGGGCGGCCCGCGCATTGCGCGGGCGCGTCCTTTCAGGAGGGAACGATGTTCAACG CAGTAATCGATGCGCCATTC
Product: iron-sulfur cluster binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNRIPELAVADARPSQDGRAAPSRLDDARLAELASRIKAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGCHGEMDYMAK HGMKRARPAELVAGTRRVISARLAYLPAETLGDALDSGGARRDWRAREAARIADPQAAVVSVYARGRDYHKVLRNRLQTL AERIEAEIGAFGHRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSFFFLGEIYVDVPLPTDAQTSPDAAPETPGAH CGSCARCIGACPTGAIVAPYRVDARRCISYLTIELHGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHG LDRASLVELFEWTAEQFDERMQGSAIRRIGYERWLRNLAVGLGNALRAAPGRIEPGARAAIVAALHARLGDPSVSALVRE HVEWALRAA
Sequences:
>Translated_409_residues MNRIPELAVADARPSQDGRAAPSRLDDARLAELASRIKAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGCHGEMDYMAK HGMKRARPAELVAGTRRVISARLAYLPAETLGDALDSGGARRDWRAREAARIADPQAAVVSVYARGRDYHKVLRNRLQTL AERIEAEIGAFGHRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSFFFLGEIYVDVPLPTDAQTSPDAAPETPGAH CGSCARCIGACPTGAIVAPYRVDARRCISYLTIELHGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHG LDRASLVELFEWTAEQFDERMQGSAIRRIGYERWLRNLAVGLGNALRAAPGRIEPGARAAIVAALHARLGDPSVSALVRE HVEWALRAA >Mature_409_residues MNRIPELAVADARPSQDGRAAPSRLDDARLAELASRIKAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGCHGEMDYMAK HGMKRARPAELVAGTRRVISARLAYLPAETLGDALDSGGARRDWRAREAARIADPQAAVVSVYARGRDYHKVLRNRLQTL AERIEAEIGAFGHRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSFFFLGEIYVDVPLPTDAQTSPDAAPETPGAH CGSCARCIGACPTGAIVAPYRVDARRCISYLTIELHGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAQAAPVADFDVRHG LDRASLVELFEWTAEQFDERMQGSAIRRIGYERWLRNLAVGLGNALRAAPGRIEPGARAAIVAALHARLGDPSVSALVRE HVEWALRAA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=377, Percent_Identity=53.0503978779841, Blast_Score=393, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 44335; Mature: 44335
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIPELAVADARPSQDGRAAPSRLDDARLAELASRIKAWGRELGFGAIGISDTDLSDAE CCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHH AGLAAWLEAGCHGEMDYMAKHGMKRARPAELVAGTRRVISARLAYLPAETLGDALDSGGA HHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC RRDWRAREAARIADPQAAVVSVYARGRDYHKVLRNRLQTLAERIEAEIGAFGHRVFTDSA CCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVLEVELAQKAGVGWRGKHTLLLQRDAGSFFFLGEIYVDVPLPTDAQTSPDAAPETPGAH CEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC CGSCARCIGACPTGAIVAPYRVDARRCISYLTIELHGSIPEPLRPLIGNRVYGCDDCQLV HHHHHHHHHCCCCCCEECCCHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCCCCEEE CPWNKFAQAAPVADFDVRHGLDRASLVELFEWTAEQFDERMQGSAIRRIGYERWLRNLAV CCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGNALRAAPGRIEPGARAAIVAALHARLGDPSVSALVREHVEWALRAA HHCHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRIPELAVADARPSQDGRAAPSRLDDARLAELASRIKAWGRELGFGAIGISDTDLSDAE CCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHH AGLAAWLEAGCHGEMDYMAKHGMKRARPAELVAGTRRVISARLAYLPAETLGDALDSGGA HHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC RRDWRAREAARIADPQAAVVSVYARGRDYHKVLRNRLQTLAERIEAEIGAFGHRVFTDSA CCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVLEVELAQKAGVGWRGKHTLLLQRDAGSFFFLGEIYVDVPLPTDAQTSPDAAPETPGAH CEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC CGSCARCIGACPTGAIVAPYRVDARRCISYLTIELHGSIPEPLRPLIGNRVYGCDDCQLV HHHHHHHHHCCCCCCEECCCHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCCCCEEE CPWNKFAQAAPVADFDVRHGLDRASLVELFEWTAEQFDERMQGSAIRRIGYERWLRNLAV CCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGNALRAAPGRIEPGARAAIVAALHARLGDPSVSALVREHVEWALRAA HHCHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]