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The map label for this gene is kdsC [H]

Identifier: 83719006

GI number: 83719006

Start: 541997

End: 542536

Strand: Reverse

Name: kdsC [H]

Synonym: BTH_I0490

Alternate gene names: 83719006

Gene position: 542536-541997 (Counterclockwise)

Preceding gene: 83720870

Following gene: 83721373

Centisome position: 14.24

GC content: 72.96

Gene sequence:

>540_bases
ATGTCCGCGTCCCCTGTCACGGCGGCCGAGCGCGCGAGCCGCGTAAAGCTGATGATTTTCGACGTCGACGGCGTGCTGAC
CGACGGCGGCCTCCATTTCACCGCGGCGGGCGACGCGATGAAGTCGTTCAACACGCTCGACGGCCACGGCGTGAAGCTCC
TCGGCGAAGCGGGCATCGCGACCGCGATCATCACCGGCCGCCGCTCGGAAGCGGTCGCCGCGCGCGCGAAGGAAATGCGC
GTCGCGCACCTGCACCAGGGCGCCGAGAACAAGCTCGCCGTGTTCGGCGAGCTGCTGCGCACGCTCGGCCTCGAGCCCGG
CGAGTGCGGCTACATGGGCGACGACTGGCCCGATCTCGCGGTGATGCTGCGTTGCGGCTTCGCGGCCGCGCCGGCGAACG
CGCATCCGGACGTGATCGCGCGCGCGCACTGGGTCGCCGAGGCCCGCGGCGGCCAGGGCGCGGTGCGCGAAGTGTGCGAC
GCGATCCTGCGCGCGCAGCGCCGCTACGACGCGCTGCTCGCGGCCGCCTGCGGAGCCTGA

Upstream 100 bases:

>100_bases
TGGAGCGCCACCGGATCAACCAGATGCTCGTCGTCGACGAGCATGGCGCGCTGATCGGCGCGCTCAACATGCACGATCTG
TTCTCGAAGAAGGTGATTTG

Downstream 100 bases:

>100_bases
GCGGATGGACGGCAAATTCCGGTTGACCTCGATGATCCCGCTCGCCGCGATGGCGGCGCTCGCGGGCGGCACGTACTGGC
TGCTGCAGGCGACGCTGCCG

Product: YrbI family phosphatase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSASPVTAAERASRVKLMIFDVDGVLTDGGLHFTAAGDAMKSFNTLDGHGVKLLGEAGIATAIITGRRSEAVAARAKEMR
VAHLHQGAENKLAVFGELLRTLGLEPGECGYMGDDWPDLAVMLRCGFAAAPANAHPDVIARAHWVAEARGGQGAVREVCD
AILRAQRRYDALLAAACGA

Sequences:

>Translated_179_residues
MSASPVTAAERASRVKLMIFDVDGVLTDGGLHFTAAGDAMKSFNTLDGHGVKLLGEAGIATAIITGRRSEAVAARAKEMR
VAHLHQGAENKLAVFGELLRTLGLEPGECGYMGDDWPDLAVMLRCGFAAAPANAHPDVIARAHWVAEARGGQGAVREVCD
AILRAQRRYDALLAAACGA
>Mature_178_residues
SASPVTAAERASRVKLMIFDVDGVLTDGGLHFTAAGDAMKSFNTLDGHGVKLLGEAGIATAIITGRRSEAVAARAKEMRV
AHLHQGAENKLAVFGELLRTLGLEPGECGYMGDDWPDLAVMLRCGFAAAPANAHPDVIARAHWVAEARGGQGAVREVCDA
ILRAQRRYDALLAAACGA

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=153, Percent_Identity=26.797385620915, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI2367202, Length=168, Percent_Identity=43.452380952381, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 18736; Mature: 18604

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASPVTAAERASRVKLMIFDVDGVLTDGGLHFTAAGDAMKSFNTLDGHGVKLLGEAGIA
CCCCCCCHHHHHCEEEEEEEECCCEEECCCEEEEECCHHHHHCCCCCCCCEEEEECCCCE
TAIITGRRSEAVAARAKEMRVAHLHQGAENKLAVFGELLRTLGLEPGECGYMGDDWPDLA
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
VMLRCGFAAAPANAHPDVIARAHWVAEARGGQGAVREVCDAILRAQRRYDALLAAACGA
HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SASPVTAAERASRVKLMIFDVDGVLTDGGLHFTAAGDAMKSFNTLDGHGVKLLGEAGIA
CCCCCCHHHHHCEEEEEEEECCCEEECCCEEEEECCHHHHHCCCCCCCCEEEEECCCCE
TAIITGRRSEAVAARAKEMRVAHLHQGAENKLAVFGELLRTLGLEPGECGYMGDDWPDLA
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
VMLRCGFAAAPANAHPDVIARAHWVAEARGGQGAVREVCDAILRAQRRYDALLAAACGA
HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]