| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718944
Identifier: 83718944
GI number: 83718944
Start: 2487230
End: 2489047
Strand: Reverse
Name: 83718944
Synonym: BTH_I2212
Alternate gene names: NA
Gene position: 2489047-2487230 (Counterclockwise)
Preceding gene: 161723144
Following gene: 83720412
Centisome position: 65.34
GC content: 69.75
Gene sequence:
>1818_bases ATGCCGGATGCCCGAAACCGCCCGCCGCTCGCGCGCCGGCATGTCGCCCATCCTCTTGCCCTCATCTGCATGAAGCCTGT CGTTCGCCTTACCGCTTCCGCCACCCGCGCGCTGCCGCGCTGGCTGCTGCTCACGCTCTGCATCGTCTACGCGGCGTTCG GGCTGTTCGGCCGCGATCCGTGGAAGAACGAGGACGCGGCGGGCTTCGGCGTGATGTGGACGATGGCGCAAGGCGGCCTG CACGACTGGCTGCTGCCGAATCTCGTCGGCAAGTTCGTCACGTCCGACGGGCCGCTCGGCTACTGGCTCGGCAGCCTCGC GATCCGCGCGCTGCCGTGGGTCGACGCGAGCAACGCGTCGCGCGTCTACACGGGCGTGCTGTTCTGCGTCGCGTCCGCGT TCGTCTGGTACGCGACCTACCTGCTCGGCCGGCGCGCGGAGATCCAGCCGTTCAAGTACGCGTTCGGCGGCGAGCCCGAG CCGCGCGACTACGGGCGCACGCTCGCCGACGGCGCGCTCCTCATCTTGCTCGCCTGCTTCGGCCTCGCCGAGCGCGGCCA CGAGACGACGCCGCAGCTCGCGCAGTTCGCGTGGATCGCGATGTTCGTCTACGGGCTCGTGCGCGCGATCGACAAGCCGG CGCAAGGCGCGCTGTGGTGGGGCCTCGCGCTCGGCCTCGTCGCGTTGTCGGGCAATCCGGTGCTCGTCGCCGCGCTCGCG GTCGGCACGCTCGCGCTCTATCTCGCCACGCCGGAGATCCGCTGCGTGCACGTGCCGGCGCTCGGGCTGCCGCTTGCCGT CGGCGTATTCGCGATCTGGCCGCTCGCCGCGCACGTCGCGTTCCCCGACGACGCGAGCTGGTTCCTCAACCAATGGCTGC ACGACAGCCTGATGCGCTTCTCCGGCCCGCCGACGACGGTGCTCGCGTACGCGGCGAAGAACCTGCCGCTCTTCACGTGG CCCGCGTGGCCGCTCGCGATCTGGGCGTGGGTCAGCTGGGCGGGGCTGCGCCGCCGGCCGCACATCGCGATTCCGCTGTC GGTCGTCGTGCCGCTCCTCGTGCTCGTGATCCTGCAAAGCCAGCAGACGAACCGGATGTACATGCTGCTGCTGCCCGCCC TCGCCGTCGTCGCGACGTTCGCGCTGCCGACGCTCAAGCGCGGCGCGATCAACGCGATCGACTGGTTCGCGGTGCTGAGC TTCACGATCCTCGGCACGTTCGTGTGGCTCGTATGGCTCGCATCTTTGACGGGCTTCCCGCACCCGCTCGCGCGCAACCT CGGCCGACTCGTGCCGGGCTACGAGCCGCACTTCAAGGTGCTGTCGTTCGTCTGCGCGCTCGCGGCGACCGCATGCTGGC TGATGCTCGTGCGCTGGCGCATCTCGCGGCAGCCGAAGGTGCTGTGGCGCAGCGTCGTGCTGTCGAGCGCCGGCACGACG CTGATGTGGGTGCTGCTGATGACGCTTTGGCTGCCGATCGTCAACTACAGCCGGACCTATCGCGACGTCGCGCAGCAGAT CGCCGCGCACCTGCCGTCCGACTACGAATGCATCTCGCCCGTACGGCTTGGCGACGCGCAGATCGCGACGTTCGCGTATT TCGGCGACATGCATTTCTCGTTCACCGACGACTGCGACGTGATCCTGCGCCAGGACCGGGCGGACTTCGGCGAGCCGAGC TCGATCTCGCAATACGTGTGGCGTCTCGTGTGGGAAGGCCGCCGCGTCGCCGACCGCGACGAGCGCTTCCGTCTGTACGA GCGGATCGAGCGCCCGAAGGCACCCATCAAGCGCCGCCCGCCGCGCAAGGCCCGCTGA
Upstream 100 bases:
>100_bases AGCCCAGGCTGCCTTTTTTTGTCCCTGTTGATCCCATGCCGCCGGCGGGTGCCCCGCGGGCCCTCCGGTTCGCTGACGCG CGTCGTCCGGCGCGTCTACA
Downstream 100 bases:
>100_bases CCGATGTTCGGCGACATCCGCCGGATCGCCGGTCTCGCCTGGCCGGTGCTCGTCGGCCAGCTCGCGATCATCGCGTTCGG CGTGATCGACACCGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Transmembrane Protein; Inner Membrane Protein; Glycosyltransferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MPDARNRPPLARRHVAHPLALICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGL HDWLLPNLVGKFVTSDGPLGYWLGSLAIRALPWVDASNASRVYTGVLFCVASAFVWYATYLLGRRAEIQPFKYAFGGEPE PRDYGRTLADGALLILLACFGLAERGHETTPQLAQFAWIAMFVYGLVRAIDKPAQGALWWGLALGLVALSGNPVLVAALA VGTLALYLATPEIRCVHVPALGLPLAVGVFAIWPLAAHVAFPDDASWFLNQWLHDSLMRFSGPPTTVLAYAAKNLPLFTW PAWPLAIWAWVSWAGLRRRPHIAIPLSVVVPLLVLVILQSQQTNRMYMLLLPALAVVATFALPTLKRGAINAIDWFAVLS FTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCALAATACWLMLVRWRISRQPKVLWRSVVLSSAGTT LMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPS SISQYVWRLVWEGRRVADRDERFRLYERIERPKAPIKRRPPRKAR
Sequences:
>Translated_605_residues MPDARNRPPLARRHVAHPLALICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGL HDWLLPNLVGKFVTSDGPLGYWLGSLAIRALPWVDASNASRVYTGVLFCVASAFVWYATYLLGRRAEIQPFKYAFGGEPE PRDYGRTLADGALLILLACFGLAERGHETTPQLAQFAWIAMFVYGLVRAIDKPAQGALWWGLALGLVALSGNPVLVAALA VGTLALYLATPEIRCVHVPALGLPLAVGVFAIWPLAAHVAFPDDASWFLNQWLHDSLMRFSGPPTTVLAYAAKNLPLFTW PAWPLAIWAWVSWAGLRRRPHIAIPLSVVVPLLVLVILQSQQTNRMYMLLLPALAVVATFALPTLKRGAINAIDWFAVLS FTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCALAATACWLMLVRWRISRQPKVLWRSVVLSSAGTT LMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPS SISQYVWRLVWEGRRVADRDERFRLYERIERPKAPIKRRPPRKAR >Mature_604_residues PDARNRPPLARRHVAHPLALICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLH DWLLPNLVGKFVTSDGPLGYWLGSLAIRALPWVDASNASRVYTGVLFCVASAFVWYATYLLGRRAEIQPFKYAFGGEPEP RDYGRTLADGALLILLACFGLAERGHETTPQLAQFAWIAMFVYGLVRAIDKPAQGALWWGLALGLVALSGNPVLVAALAV GTLALYLATPEIRCVHVPALGLPLAVGVFAIWPLAAHVAFPDDASWFLNQWLHDSLMRFSGPPTTVLAYAAKNLPLFTWP AWPLAIWAWVSWAGLRRRPHIAIPLSVVVPLLVLVILQSQQTNRMYMLLLPALAVVATFALPTLKRGAINAIDWFAVLSF TILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSFVCALAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTL MWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSS ISQYVWRLVWEGRRVADRDERFRLYERIERPKAPIKRRPPRKAR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67669; Mature: 67538
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDARNRPPLARRHVAHPLALICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWLGSLAIRALPWVDASNAS CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH RVYTGVLFCVASAFVWYATYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLILLACF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GLAERGHETTPQLAQFAWIAMFVYGLVRAIDKPAQGALWWGLALGLVALSGNPVLVAALA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH VGTLALYLATPEIRCVHVPALGLPLAVGVFAIWPLAAHVAFPDDASWFLNQWLHDSLMRF HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC SGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVVVPLLVLVILQS CCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCC QQTNRMYMLLLPALAVVATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPLARNLGRLVPGYEPHFKVLSFVCALAATACWLMLVRWRISRQPKVLWRSVVLSSAGTT CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH LMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCCC FTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPKAPIKRRP CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PRKAR CCCCC >Mature Secondary Structure PDARNRPPLARRHVAHPLALICMKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWLGSLAIRALPWVDASNAS CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH RVYTGVLFCVASAFVWYATYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLILLACF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GLAERGHETTPQLAQFAWIAMFVYGLVRAIDKPAQGALWWGLALGLVALSGNPVLVAALA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH VGTLALYLATPEIRCVHVPALGLPLAVGVFAIWPLAAHVAFPDDASWFLNQWLHDSLMRF HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC SGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIAIPLSVVVPLLVLVILQS CCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCC QQTNRMYMLLLPALAVVATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPLARNLGRLVPGYEPHFKVLSFVCALAATACWLMLVRWRISRQPKVLWRSVVLSSAGTT CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH LMWVLLMTLWLPIVNYSRTYRDVAQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCCC FTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERFRLYERIERPKAPIKRRP CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PRKAR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA