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The map label for this gene is ydiF [H]

Identifier: 83718821

GI number: 83718821

Start: 386349

End: 387995

Strand: Reverse

Name: ydiF [H]

Synonym: BTH_I0348

Alternate gene names: 83718821

Gene position: 387995-386349 (Counterclockwise)

Preceding gene: 83719763

Following gene: 83718628

Centisome position: 10.19

GC content: 74.74

Gene sequence:

>1647_bases
ATGGCCCGGACCGCTCCCATCGGCGCGCTCGTCGCGCTTCATCACGTTTCCTTTCGCTTCGACGACGGCGTCACGCTGTT
CGATTCGCTCGACCTCACGTTCGATCGCACGCCCACTGCAATCGTCGGCCGCAACGGCGCCGGCAAGAGCGTGCTCGCGC
GCCTGATCGCCGGCCGGCTCGCGCCGACGGCGGGCGCGATCGAGCGGCACGCGTCGATCGCGTTCGTCGCGCAGCACGAC
GCCGACGCGATGCCCGACCCGCAATGCACGGCCGCCGCCGTCGCGCGCCTCGACGCGCCGCTCGCCGCGCTCGAGCGGGT
TGCGCGCGGCGACGCGCGCGCGGACGACTTCGACTTGCTCGACGGGCGCTGGGACCTCGCCGAGCGCTGGCAAGCGGCGC
TCGGCGACGCCGGCCTGCCGCCGATCGACGCGCGCACGCCCGCGCACGCGCTGAGCGGCGGCCAGCTCGCGCGCGTCGCG
ATGATCGGCGCGCTGCTGTCGGGCGCGGACCTGCTCGTCGCCGACGAACCGACGAACCATCTCGACGCGCCCGGCCGCGA
CTGGCTGCGCGCGGCGCTCGCCGGCTGGCGCAGCGGCCTCGTCGTCGTCAGTCACGATCGCGCGCTGCTCGCGGGCGTCG
AGCGGATCGTCGAGCTGACGCCGCGCGGCACGCGCGTCTATGGCGGCAACTACGCTGCGTATCGCGCGCAACGCGACGCC
GAAGCCCAAACGGCGCAGGCCGCGCTCGATCACGCGCACGCGGAGCGCGACCGCGAGCGCCGCCGGCTCGCGCGCGAGCA
CGACACGATTCAGCGGCATGCAGCCGCCACGCGCCGCTATGCGGAAACGGCCAACCTGCCGAGCGGCAAACGCGTGTCGC
TGAAGAACAGCGCGCGCGAGATCATGGGCCTCGTGCGGCGCGATCATCGCGACGCGAAGGCCGCTTTGGGCGACGCCGTG
CGGGAAGCGGCGCAGCGCGTCGAGCCGGACGCGCCGGTGCTCGTGTCGCTGCCGGGCACCGAGGTCGGCGCGCGCCGGCG
GCTCTTCACGCTCGACGCCGCGCGGCTGCCGTGGCTGCCCGCGCACGCGCGCGCGGCAACCGTCACGTGGTCCGCGCACG
GGCCGGCGCGAATCGCGGTCACGGGGCCGAACGGCTGCGGGAAATCGACGCTGCTGCGCATGCTCGCGGGCGAATGCGCG
CCGCGCGCGGGACGCTGCGACACGCATGTGCCGCTCGCGTATCTCGACCAGCGGCTCGCGCTGCTCGATCCGCGGCGCTC
TGTGGTCGAGCAGCTCGCGGCGCTGCGCACGCCGCTCGCGGAAGGCGAGCTGCGCAGCCGGCTCGCGCTGCTTCAGCTCG
ACGCGGCGCGCGCGACGCAGCCGGCCGCGCGGCTGAGCGGCGGCGAACGGCTGAAGGCGGCGCTCGCGTGCGCGCTATGG
CGCGAGACGCCCGCGCAACTGCTGCTGCTCGACGAGCCGACGAACCATCTCGATCTCGAATCGGTGCGCGCGTTCGAAGC
GGCGCTCGCGGATTTTCCGGGGGCGATCGTCGCGGTGTCGCACGACGCGGCGTTCATCGACGCGCTCGCGCCGACGCACG
CGATGCGGTGGACGAGCGAGGGCTGGCGCTTCGAGCCCGTTGCATGA

Upstream 100 bases:

>100_bases
GCCTTCCCCGAATGGTTTCGCCGCTGCGCATTGCCCTTCGTGCACACCATGCACGCCGCACGCGCCGCGCGAATGTCGCA
ATCCATTTCCGGAGGTGCTC

Downstream 100 bases:

>100_bases
CGGGGCGCGCCGGCCGCCTCGGTGAGCCGGCGAAGCGGCGAGGCCGAGAGGCCGTATGGCGGCGGCAATCGACCGCCGGC
CGCCGCGGCACGCGGACCGC

Product: peptide ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MARTAPIGALVALHHVSFRFDDGVTLFDSLDLTFDRTPTAIVGRNGAGKSVLARLIAGRLAPTAGAIERHASIAFVAQHD
ADAMPDPQCTAAAVARLDAPLAALERVARGDARADDFDLLDGRWDLAERWQAALGDAGLPPIDARTPAHALSGGQLARVA
MIGALLSGADLLVADEPTNHLDAPGRDWLRAALAGWRSGLVVVSHDRALLAGVERIVELTPRGTRVYGGNYAAYRAQRDA
EAQTAQAALDHAHAERDRERRRLAREHDTIQRHAAATRRYAETANLPSGKRVSLKNSAREIMGLVRRDHRDAKAALGDAV
REAAQRVEPDAPVLVSLPGTEVGARRRLFTLDAARLPWLPAHARAATVTWSAHGPARIAVTGPNGCGKSTLLRMLAGECA
PRAGRCDTHVPLAYLDQRLALLDPRRSVVEQLAALRTPLAEGELRSRLALLQLDAARATQPAARLSGGERLKAALACALW
RETPAQLLLLDEPTNHLDLESVRAFEAALADFPGAIVAVSHDAAFIDALAPTHAMRWTSEGWRFEPVA

Sequences:

>Translated_548_residues
MARTAPIGALVALHHVSFRFDDGVTLFDSLDLTFDRTPTAIVGRNGAGKSVLARLIAGRLAPTAGAIERHASIAFVAQHD
ADAMPDPQCTAAAVARLDAPLAALERVARGDARADDFDLLDGRWDLAERWQAALGDAGLPPIDARTPAHALSGGQLARVA
MIGALLSGADLLVADEPTNHLDAPGRDWLRAALAGWRSGLVVVSHDRALLAGVERIVELTPRGTRVYGGNYAAYRAQRDA
EAQTAQAALDHAHAERDRERRRLAREHDTIQRHAAATRRYAETANLPSGKRVSLKNSAREIMGLVRRDHRDAKAALGDAV
REAAQRVEPDAPVLVSLPGTEVGARRRLFTLDAARLPWLPAHARAATVTWSAHGPARIAVTGPNGCGKSTLLRMLAGECA
PRAGRCDTHVPLAYLDQRLALLDPRRSVVEQLAALRTPLAEGELRSRLALLQLDAARATQPAARLSGGERLKAALACALW
RETPAQLLLLDEPTNHLDLESVRAFEAALADFPGAIVAVSHDAAFIDALAPTHAMRWTSEGWRFEPVA
>Mature_547_residues
ARTAPIGALVALHHVSFRFDDGVTLFDSLDLTFDRTPTAIVGRNGAGKSVLARLIAGRLAPTAGAIERHASIAFVAQHDA
DAMPDPQCTAAAVARLDAPLAALERVARGDARADDFDLLDGRWDLAERWQAALGDAGLPPIDARTPAHALSGGQLARVAM
IGALLSGADLLVADEPTNHLDAPGRDWLRAALAGWRSGLVVVSHDRALLAGVERIVELTPRGTRVYGGNYAAYRAQRDAE
AQTAQAALDHAHAERDRERRRLAREHDTIQRHAAATRRYAETANLPSGKRVSLKNSAREIMGLVRRDHRDAKAALGDAVR
EAAQRVEPDAPVLVSLPGTEVGARRRLFTLDAARLPWLPAHARAATVTWSAHGPARIAVTGPNGCGKSTLLRMLAGECAP
RAGRCDTHVPLAYLDQRLALLDPRRSVVEQLAALRTPLAEGELRSRLALLQLDAARATQPAARLSGGERLKAALACALWR
ETPAQLLLLDEPTNHLDLESVRAFEAALADFPGAIVAVSHDAAFIDALAPTHAMRWTSEGWRFEPVA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=28.9272030651341, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI27881506, Length=558, Percent_Identity=27.5985663082437, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI10947137, Length=558, Percent_Identity=27.5985663082437, Blast_Score=139, Evalue=9e-33,
Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=26.605504587156, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=26.605504587156, Blast_Score=121, Evalue=2e-27,
Organism=Escherichia coli, GI1789751, Length=501, Percent_Identity=30.1397205588822, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1787182, Length=566, Percent_Identity=29.1519434628975, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI2367384, Length=538, Percent_Identity=30.4832713754647, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=25.8426966292135, Blast_Score=129, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=28.0769230769231, Blast_Score=154, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17559834, Length=555, Percent_Identity=26.4864864864865, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17553372, Length=523, Percent_Identity=27.5334608030593, Blast_Score=127, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6320874, Length=547, Percent_Identity=27.6051188299817, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6321121, Length=548, Percent_Identity=25.5474452554745, Blast_Score=128, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6323278, Length=157, Percent_Identity=32.484076433121, Blast_Score=74, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6324314, Length=157, Percent_Identity=33.1210191082803, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6325030, Length=93, Percent_Identity=38.7096774193548, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24642252, Length=538, Percent_Identity=28.8104089219331, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI18859989, Length=538, Percent_Identity=28.8104089219331, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24666836, Length=539, Percent_Identity=27.0871985157699, Blast_Score=145, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24641342, Length=390, Percent_Identity=27.6923076923077, Blast_Score=132, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58759; Mature: 58628

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTAPIGALVALHHVSFRFDDGVTLFDSLDLTFDRTPTAIVGRNGAGKSVLARLIAGRL
CCCCCCHHHHHHHHHHEEEECCCCEEEECCCEEECCCCCEEEECCCCCHHHHHHHHHHHC
APTAGAIERHASIAFVAQHDADAMPDPQCTAAAVARLDAPLAALERVARGDARADDFDLL
CCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
DGRWDLAERWQAALGDAGLPPIDARTPAHALSGGQLARVAMIGALLSGADLLVADEPTNH
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
LDAPGRDWLRAALAGWRSGLVVVSHDRALLAGVERIVELTPRGTRVYGGNYAAYRAQRDA
CCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEECCCEEEHHCCCCH
EAQTAQAALDHAHAERDRERRRLAREHDTIQRHAAATRRYAETANLPSGKRVSLKNSARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
IMGLVRRDHRDAKAALGDAVREAAQRVEPDAPVLVSLPGTEVGARRRLFTLDAARLPWLP
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHCCCCC
AHARAATVTWSAHGPARIAVTGPNGCGKSTLLRMLAGECAPRAGRCDTHVPLAYLDQRLA
CCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LLDPRRSVVEQLAALRTPLAEGELRSRLALLQLDAARATQPAARLSGGERLKAALACALW
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEECHHHCCCCHHHCCCHHHHHHHHHHHHH
RETPAQLLLLDEPTNHLDLESVRAFEAALADFPGAIVAVSHDAAFIDALAPTHAMRWTSE
HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCHHHHHCCCC
GWRFEPVA
CCEECCCC
>Mature Secondary Structure 
ARTAPIGALVALHHVSFRFDDGVTLFDSLDLTFDRTPTAIVGRNGAGKSVLARLIAGRL
CCCCCHHHHHHHHHHEEEECCCCEEEECCCEEECCCCCEEEECCCCCHHHHHHHHHHHC
APTAGAIERHASIAFVAQHDADAMPDPQCTAAAVARLDAPLAALERVARGDARADDFDLL
CCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
DGRWDLAERWQAALGDAGLPPIDARTPAHALSGGQLARVAMIGALLSGADLLVADEPTNH
CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
LDAPGRDWLRAALAGWRSGLVVVSHDRALLAGVERIVELTPRGTRVYGGNYAAYRAQRDA
CCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEECCCEEEHHCCCCH
EAQTAQAALDHAHAERDRERRRLAREHDTIQRHAAATRRYAETANLPSGKRVSLKNSARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
IMGLVRRDHRDAKAALGDAVREAAQRVEPDAPVLVSLPGTEVGARRRLFTLDAARLPWLP
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHCCCCC
AHARAATVTWSAHGPARIAVTGPNGCGKSTLLRMLAGECAPRAGRCDTHVPLAYLDQRLA
CCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LLDPRRSVVEQLAALRTPLAEGELRSRLALLQLDAARATQPAARLSGGERLKAALACALW
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHEECHHHCCCCHHHCCCHHHHHHHHHHHHH
RETPAQLLLLDEPTNHLDLESVRAFEAALADFPGAIVAVSHDAAFIDALAPTHAMRWTSE
HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCHHHHHCCCC
GWRFEPVA
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]