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The map label for this gene is xylH [H]

Identifier: 83718820

GI number: 83718820

Start: 2637080

End: 2638279

Strand: Direct

Name: xylH [H]

Synonym: BTH_I2341

Alternate gene names: 83718820

Gene position: 2637080-2638279 (Clockwise)

Preceding gene: 83720437

Following gene: 83718786

Centisome position: 69.23

GC content: 71.58

Gene sequence:

>1200_bases
ATGAATACCGAACTGTCTTCCGCCCCGGCGCGTGCGCGCGCAGCCCGCGGCCGCCGCGCTCGCGGCCTGCCGTCGCGCCG
GCTGTTCGCGCGCTACAAGGTCCTCGCGCTGCTGCTCGCGGTCGCGGCGATCTGGGCGTTCTTCTCGGTGCTGACCGACG
GCGCGTTCGTCACGCCGCGCAACGTGTCGAACCTGCTGCGGCAAATGTCGATCACCGGCATGCTCGCGTGCGGGATGGTG
TTCGTGATCATCGCGGGCGAGATCGATCTGTCGGTCGGCTCGCTGCTCGGGCTGCTCGGCGGCGTCGCGGCGATCCTCGA
CGCGAACCGCCGCTGGCCGGTCGCCGCGACGGTGCCGGCGGTGCTCGCGCTCGGCGTGGCGATCGGGCTCTTCAACGGCT
GGTGGTCGACCTACCGGCGCGTGCCGTCGTTCATCGTCGGCCTCGGCGGGATGCTCGCGTTCCGCGGGATACTGCTCGGC
GTGACGGGCGGCTCGACGATCGCGCCGGTATCGGACGGCTTCGTGTTCATCGGGCAGGGCTATCTGCCGCGCGCGGCCGG
CGACGCGCTCGCGCTCGCGCTGTTCGCGTTCGTCGTGCTGCTCGTCGTGCGGCAGCGCGGCAACCGGCGGCGCTACCGGC
TCGCGGTCGCGCCGCCGTGGCAGGACGTCGCGAAAATCGCCGGCGCGGGCGCGGTACTGTTCGCGTTCGTCGCGACGCTC
GACCGCTACGGCGGCATTCCGGTGCCCGTGCTGCTGCTGCTCGCGCTGCTCGGCGCGTTTTCATGGGTCGCGACGCAGAC
CGTGTTCGGCCGGCGCATCTATGCGGTCGGCTCGAACCTCGAGGCGACGCGCCTCTCGGGCATCGACACGGACCGCGTGA
AGCTCGCGATCTTCGCGCTGATGGGGCTGATGTGCGCGTTCGCGGGCCTCGTCAACACCGCGCGGCTTGCCGCCGGCTCG
CCGTCGGCGGGCGCGATGGGCGAGCTCGACGCGATCGCCGCGTGCTTCATCGGCGGCACGTCGATGCGCGGCGGGTCCGG
CACCGTTTATGGCGCGCTGATCGGAGCGCTCGTGATGGCGAGCCTCGACAACGGCATGTCGATGCTGGACGTCGACGCGT
ACTGGCAGATGATCGTCAAGGGCGGGGTGCTGGTGCTCGCGGTGTGGATCGACGTGGCGTCGCGGTCGAACCGGCGGTGA

Upstream 100 bases:

>100_bases
GCGGCGATTTCGTCAACGACGGGCTCACGCAGGAACAGATCCTCGCCGCCGCGCTGAAGAGCCGGCGGCGCCGCGCCGAA
CCCACCGCAGCGAGTGCGAC

Downstream 100 bases:

>100_bases
CGCCGCCGGCACGCCTGTTGCGCGCCGGGGTTTTTATACCCATGCCGATAAGGATATCGGCCGAATCCAAATTTTCATTG
GGCGGTTATCGGCCTTGTCC

Product: sugar ABC transporter permease

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNTELSSAPARARAARGRRARGLPSRRLFARYKVLALLLAVAAIWAFFSVLTDGAFVTPRNVSNLLRQMSITGMLACGMV
FVIIAGEIDLSVGSLLGLLGGVAAILDANRRWPVAATVPAVLALGVAIGLFNGWWSTYRRVPSFIVGLGGMLAFRGILLG
VTGGSTIAPVSDGFVFIGQGYLPRAAGDALALALFAFVVLLVVRQRGNRRRYRLAVAPPWQDVAKIAGAGAVLFAFVATL
DRYGGIPVPVLLLLALLGAFSWVATQTVFGRRIYAVGSNLEATRLSGIDTDRVKLAIFALMGLMCAFAGLVNTARLAAGS
PSAGAMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGVLVLAVWIDVASRSNRR

Sequences:

>Translated_399_residues
MNTELSSAPARARAARGRRARGLPSRRLFARYKVLALLLAVAAIWAFFSVLTDGAFVTPRNVSNLLRQMSITGMLACGMV
FVIIAGEIDLSVGSLLGLLGGVAAILDANRRWPVAATVPAVLALGVAIGLFNGWWSTYRRVPSFIVGLGGMLAFRGILLG
VTGGSTIAPVSDGFVFIGQGYLPRAAGDALALALFAFVVLLVVRQRGNRRRYRLAVAPPWQDVAKIAGAGAVLFAFVATL
DRYGGIPVPVLLLLALLGAFSWVATQTVFGRRIYAVGSNLEATRLSGIDTDRVKLAIFALMGLMCAFAGLVNTARLAAGS
PSAGAMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGVLVLAVWIDVASRSNRR
>Mature_399_residues
MNTELSSAPARARAARGRRARGLPSRRLFARYKVLALLLAVAAIWAFFSVLTDGAFVTPRNVSNLLRQMSITGMLACGMV
FVIIAGEIDLSVGSLLGLLGGVAAILDANRRWPVAATVPAVLALGVAIGLFNGWWSTYRRVPSFIVGLGGMLAFRGILLG
VTGGSTIAPVSDGFVFIGQGYLPRAAGDALALALFAFVVLLVVRQRGNRRRYRLAVAPPWQDVAKIAGAGAVLFAFVATL
DRYGGIPVPVLLLLALLGAFSWVATQTVFGRRIYAVGSNLEATRLSGIDTDRVKLAIFALMGLMCAFAGLVNTARLAAGS
PSAGAMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDAYWQMIVKGGVLVLAVWIDVASRSNRR

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=377, Percent_Identity=55.1724137931034, Blast_Score=342, Evalue=2e-95,
Organism=Escherichia coli, GI1790191, Length=147, Percent_Identity=46.2585034013605, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1788896, Length=159, Percent_Identity=37.1069182389937, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI145693152, Length=347, Percent_Identity=28.2420749279539, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790524, Length=147, Percent_Identity=40.8163265306122, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082395, Length=331, Percent_Identity=28.3987915407855, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788471, Length=142, Percent_Identity=38.7323943661972, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787793, Length=140, Percent_Identity=35, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787794, Length=155, Percent_Identity=29.0322580645161, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41796; Mature: 41796

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTELSSAPARARAARGRRARGLPSRRLFARYKVLALLLAVAAIWAFFSVLTDGAFVTPR
CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCH
NVSNLLRQMSITGMLACGMVFVIIAGEIDLSVGSLLGLLGGVAAILDANRRWPVAATVPA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
VLALGVAIGLFNGWWSTYRRVPSFIVGLGGMLAFRGILLGVTGGSTIAPVSDGFVFIGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCEEEECCC
YLPRAAGDALALALFAFVVLLVVRQRGNRRRYRLAVAPPWQDVAKIAGAGAVLFAFVATL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHH
DRYGGIPVPVLLLLALLGAFSWVATQTVFGRRIYAVGSNLEATRLSGIDTDRVKLAIFAL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHCCCCHHHHHHHHHHH
MGLMCAFAGLVNTARLAAGSPSAGAMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMA
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SLDNGMSMLDVDAYWQMIVKGGVLVLAVWIDVASRSNRR
HHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTELSSAPARARAARGRRARGLPSRRLFARYKVLALLLAVAAIWAFFSVLTDGAFVTPR
CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCH
NVSNLLRQMSITGMLACGMVFVIIAGEIDLSVGSLLGLLGGVAAILDANRRWPVAATVPA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
VLALGVAIGLFNGWWSTYRRVPSFIVGLGGMLAFRGILLGVTGGSTIAPVSDGFVFIGQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCCEEEECCC
YLPRAAGDALALALFAFVVLLVVRQRGNRRRYRLAVAPPWQDVAKIAGAGAVLFAFVATL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHH
DRYGGIPVPVLLLLALLGAFSWVATQTVFGRRIYAVGSNLEATRLSGIDTDRVKLAIFAL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHCCCCHHHHHHHHHHH
MGLMCAFAGLVNTARLAAGSPSAGAMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMA
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SLDNGMSMLDVDAYWQMIVKGGVLVLAVWIDVASRSNRR
HHCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]