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The map label for this gene is ytfQ [H]

Identifier: 83718786

GI number: 83718786

Start: 2638520

End: 2639482

Strand: Direct

Name: ytfQ [H]

Synonym: BTH_I2342

Alternate gene names: 83718786

Gene position: 2638520-2639482 (Clockwise)

Preceding gene: 83718820

Following gene: 83720887

Centisome position: 69.27

GC content: 65.01

Gene sequence:

>963_bases
ATGACATGCATCAGGACGCTTGCGGCCGGCGCGATCGTTGCCGCGACGACGTGGCTGGCCCCCGGCGCTTTCGCGCAGCA
AAAGCCGATCACGCTCGGGTTTTCGCAAGTCGGCGCGGAGAGCGCGTGGCGCACCGCGAACAGCGTTTCGGTGAAGAGCG
CGGCGAAGGACGCCGGCATCAACCTGAAGTTCTCGGACGCACAGCAAAAGCAGGAGAACCAGATTCGCGCGATCCGCTCG
TTCATCGCGCAGAAGGTCGACGTGATCGCGTTCTCGCCCGTCGTCGAATCCGGCTGGGAACCCGTGCTCAGCGAAGCGAA
GGCGGCCCACATTCCGGTGATCCTGACCGATCGCGCGGTCGACGTGAAGGACCCTTCGCTGTACGTGACGATGATCGGCT
CCGACTTCCTCGAGGAAGGCCGGCGCGCGGGCCGCTGGCTCGAGGAGCGCTACAGGAACGATGCGGGCCCGATCAACATC
GTCGAGCTGCAGGGCACGGTCGGCTCCGCGCCGGCCAACGATCGCCGCGCGGGCCTGCTCGAAGTGATCCGGAACAATCC
GAAATTCAAGATCATCGCATCGCAAAGCGGCGATTTCACGCTCGCCGGCGGCAAGCAGGTGATGGAAGCGTTCGCGAAGA
CCTACGGCAAGCGAATCAACGTCGTGTACGCGCACAACGACGACATGGCGCTCGGCGCGATCCAGGCGATGGAGGAGGCG
GGGATGAAGCCGGGCAAGGACGTGAGCGTCGTGTCGTTCGATGCGACGAAGGGCGGCTTCCAGGCGATGGTCGCGGGCAA
GATCAACGTCGACGTCGAATGCAGTCCGCTGCTCGGCCCCCAGTTGATGAGCGCGGTGAAGGAGGTGGTCGCCGGCAAGC
CGCTGCCCAAGCGCATCGTGACCGACGAGACGGTGTTTCCGATGAGCGTCGCCGCGCAAGTGCTGCCGACGCGCAAATAC
TGA

Upstream 100 bases:

>100_bases
GCCGCCGGCGGCGCAACCCCGAACCGCGCTCGCGTCACGGAAAAACAGAACAGCGAGAGAGCCGGCGCCGCGGCGAACGA
CAACATCATTGGAGACGACC

Downstream 100 bases:

>100_bases
GGCACGCGGCGCGGGCGGCATCGCGCCGGTCGACATCCCGCCGTTCGACATCTTTTTCGCAGGAGCGCGCATGACGCATT
CGCCGGCAGTCGAGATGATC

Product: periplasmic ribose-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTCIRTLAAGAIVAATTWLAPGAFAQQKPITLGFSQVGAESAWRTANSVSVKSAAKDAGINLKFSDAQQKQENQIRAIRS
FIAQKVDVIAFSPVVESGWEPVLSEAKAAHIPVILTDRAVDVKDPSLYVTMIGSDFLEEGRRAGRWLEERYRNDAGPINI
VELQGTVGSAPANDRRAGLLEVIRNNPKFKIIASQSGDFTLAGGKQVMEAFAKTYGKRINVVYAHNDDMALGAIQAMEEA
GMKPGKDVSVVSFDATKGGFQAMVAGKINVDVECSPLLGPQLMSAVKEVVAGKPLPKRIVTDETVFPMSVAAQVLPTRKY

Sequences:

>Translated_320_residues
MTCIRTLAAGAIVAATTWLAPGAFAQQKPITLGFSQVGAESAWRTANSVSVKSAAKDAGINLKFSDAQQKQENQIRAIRS
FIAQKVDVIAFSPVVESGWEPVLSEAKAAHIPVILTDRAVDVKDPSLYVTMIGSDFLEEGRRAGRWLEERYRNDAGPINI
VELQGTVGSAPANDRRAGLLEVIRNNPKFKIIASQSGDFTLAGGKQVMEAFAKTYGKRINVVYAHNDDMALGAIQAMEEA
GMKPGKDVSVVSFDATKGGFQAMVAGKINVDVECSPLLGPQLMSAVKEVVAGKPLPKRIVTDETVFPMSVAAQVLPTRKY
>Mature_319_residues
TCIRTLAAGAIVAATTWLAPGAFAQQKPITLGFSQVGAESAWRTANSVSVKSAAKDAGINLKFSDAQQKQENQIRAIRSF
IAQKVDVIAFSPVVESGWEPVLSEAKAAHIPVILTDRAVDVKDPSLYVTMIGSDFLEEGRRAGRWLEERYRNDAGPINIV
ELQGTVGSAPANDRRAGLLEVIRNNPKFKIIASQSGDFTLAGGKQVMEAFAKTYGKRINVVYAHNDDMALGAIQAMEEAG
MKPGKDVSVVSFDATKGGFQAMVAGKINVDVECSPLLGPQLMSAVKEVVAGKPLPKRIVTDETVFPMSVAAQVLPTRKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=294, Percent_Identity=49.6598639455782, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1790192, Length=224, Percent_Identity=30.8035714285714, Blast_Score=88, Evalue=9e-19,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34291; Mature: 34160

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCIRTLAAGAIVAATTWLAPGAFAQQKPITLGFSQVGAESAWRTANSVSVKSAAKDAGI
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHCCHHHHCCCCCCCHHHHHHHCCC
NLKFSDAQQKQENQIRAIRSFIAQKVDVIAFSPVVESGWEPVLSEAKAAHIPVILTDRAV
EEEECCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCHHHHHCCCCCCCCEEEECCEE
DVKDPSLYVTMIGSDFLEEGRRAGRWLEERYRNDAGPINIVELQGTVGSAPANDRRAGLL
CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHH
EVIRNNPKFKIIASQSGDFTLAGGKQVMEAFAKTYGKRINVVYAHNDDMALGAIQAMEEA
HHHHCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHC
GMKPGKDVSVVSFDATKGGFQAMVAGKINVDVECSPLLGPQLMSAVKEVVAGKPLPKRIV
CCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHC
TDETVFPMSVAAQVLPTRKY
CCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TCIRTLAAGAIVAATTWLAPGAFAQQKPITLGFSQVGAESAWRTANSVSVKSAAKDAGI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHCCHHHHCCCCCCCHHHHHHHCCC
NLKFSDAQQKQENQIRAIRSFIAQKVDVIAFSPVVESGWEPVLSEAKAAHIPVILTDRAV
EEEECCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCHHHHHCCCCCCCCEEEECCEE
DVKDPSLYVTMIGSDFLEEGRRAGRWLEERYRNDAGPINIVELQGTVGSAPANDRRAGLL
CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHH
EVIRNNPKFKIIASQSGDFTLAGGKQVMEAFAKTYGKRINVVYAHNDDMALGAIQAMEEA
HHHHCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHC
GMKPGKDVSVVSFDATKGGFQAMVAGKINVDVECSPLLGPQLMSAVKEVVAGKPLPKRIV
CCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHC
TDETVFPMSVAAQVLPTRKY
CCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]