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The map label for this gene is aer [H]

Identifier: 83718725

GI number: 83718725

Start: 704767

End: 706518

Strand: Reverse

Name: aer [H]

Synonym: BTH_I0618

Alternate gene names: 83718725

Gene position: 706518-704767 (Counterclockwise)

Preceding gene: 83718521

Following gene: 83721541

Centisome position: 18.55

GC content: 68.89

Gene sequence:

>1752_bases
ATGCGCGCCAATCTTCCAGTGACCCAGCGGGAATTCGACTTTCCCGACGATGCGACGCTGATGTCGACGACCGATCCCCA
GAGCTACGTCACGTACGCAAACGCGGCGTTCATCCAGGTGAGCGGATTCGAGCGCGACGAAATCATCGGCGAGCCGCACA
ATTTCGTTCGTCATCCCGACATGCCGGCCGAGGCGTTCGCCGACATGTGGGCGACGCTGAAATCCGGCCGCTCGTGGACG
GCGGTCATCAAGAACCGCCGCAAGAACGGCGATCACTACTGGGTGCGCGCGAACGCGACGCCCGTGATCCGCAACGGGCA
GCTCGTCGGCTACATGTCGGTGCGCACGAAACCGTCGCGCGAGGAAATCGCGCAAGCAGACGCGCTCTATCGCGACTTGC
GCGAGCACCGCGCGCGCGGCAGGAAGTTTCATCAGGGCCTCATCGTGCGCACCGGGCTCCTCGGCTGGATGTCGCTGCCG
CAAACGATCAGCGCGCGCTGGCGCGTCCGCGCGGCGCTGCTCACGCTCCTCGCCGGCTCCGCATGGACGGCGTTCCTCTG
CGGGCTGCACGGCGTGATGCTCGACGGCTTCGCCGCCACCGAAACGGTGTTGCTGCTGCTCGCGGAGTTCTGGCTCGCCG
CGCAGATCACCGGGCCGCTGCAACGCGTGCTGAAGCAATCGCTCGCGGTCGCGGCGGGCCAGGCGGGCGACAACGTCCAT
CTGAATCGCGTCGACGAAATCGGCATGATCATGCGCGCGGTCAATCAGGCCGGGCTCAATCTGCGCTCGCTCGTCGATGA
CGTGAGCGAGCAGTTGTCCGGCCTGCAGAGCGCGAGCGGCAGGATCACCGCGGGCAACGACGATCTGAGCGGCCGCAGCG
AGCAGGCGGCCGCGAGCCTCGAGGAAACCGCCGCGTCGATGGAACAGATGACGGCGACGGTGCGCAACAACGCGGATACC
GCGACGCAGGCGAGCCAGCTCGCCGGCTCGACGAGCGAAGCGGCCGAGAAAGGCGACGCGGTGGTCGGCAAAGTGGTGGC
CACGATGGGCGAGATCAGTGCGTCGAGCCGCAAGATCAGCGAGATCATCGGCGTGATCGACAGCATCGCGTTCCAGACGA
ACATCCTCGCGCTGAACGCGGCCGTCGAGGCGGCGCGGGCCGGCGAGCAAGGGCGCGGCTTCGCGGTCGTCGCGGCCGAA
GTGCGCACGCTCGCGCAGCGCAGCGCGAACGCGGCGAAAGAGATCGCGGCGCTGATCCACGACAGCGCGCAGAAGACCGC
GGCGGGCAGCGCACTCGTCGATCAGGCGGGCGAAGCGATGAACGATATCCGCTCGCAGGTCGCGCGGGTCGCGGGCCTGA
TCGGCGAGATCAGCTCGGCGACGCGCGAGCAGTCCGACGGGATCGGCCAGGTCAACGTCGCCGTGACGCAGTTGGACAAG
ATGACCCAGCAGAACGCCGCGCTCGTGCAGGAATCGGCGACGACCGCCGACGAGCTGAAACGCCGCACGCAGCGGCTCGT
CGATGCGGTGGCCGTGTTTCGCCTGAACGGGCGCGCGCACGCGCGGCGCGACGATGCGCGTGCGCCTCGAGCCGCGCCGG
AGCATGCGATGCGCGAGCGCGCGAGCGTCGCGCGGAACCAGCCCGCGATGCGCGCGGCGCCGGCTCCGTCTCCCGCGCTC
GCGAGCGCATCGACGGCGAACGCCCCCGCCCGGACGACGGCGCACGCGGATATGGATTGGCAGACATTCTGA

Upstream 100 bases:

>100_bases
GCTCTCGCGAAATCGTCCGTAAACCCGTTCATGCTGCCGCATTGCGCATCCGCCGCGCCCGCGACACACGACGTTGCCGA
TCTTACGGAGAGAGACTTTC

Downstream 100 bases:

>100_bases
ACGGCATGCGCCGCGCGTTGCGGCGTCGAGACGAAAACAGGCGGCGCTCGCGCACCGCCTGTTCGTTTGCGATCCCGCCC
GCCGGATGCCCGGCGCGCGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MRANLPVTQREFDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPDMPAEAFADMWATLKSGRSWT
AVIKNRRKNGDHYWVRANATPVIRNGQLVGYMSVRTKPSREEIAQADALYRDLREHRARGRKFHQGLIVRTGLLGWMSLP
QTISARWRVRAALLTLLAGSAWTAFLCGLHGVMLDGFAATETVLLLLAEFWLAAQITGPLQRVLKQSLAVAAGQAGDNVH
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQSASGRITAGNDDLSGRSEQAAASLEETAASMEQMTATVRNNADT
ATQASQLAGSTSEAAEKGDAVVGKVVATMGEISASSRKISEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAE
VRTLAQRSANAAKEIAALIHDSAQKTAAGSALVDQAGEAMNDIRSQVARVAGLIGEISSATREQSDGIGQVNVAVTQLDK
MTQQNAALVQESATTADELKRRTQRLVDAVAVFRLNGRAHARRDDARAPRAAPEHAMRERASVARNQPAMRAAPAPSPAL
ASASTANAPARTTAHADMDWQTF

Sequences:

>Translated_583_residues
MRANLPVTQREFDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPDMPAEAFADMWATLKSGRSWT
AVIKNRRKNGDHYWVRANATPVIRNGQLVGYMSVRTKPSREEIAQADALYRDLREHRARGRKFHQGLIVRTGLLGWMSLP
QTISARWRVRAALLTLLAGSAWTAFLCGLHGVMLDGFAATETVLLLLAEFWLAAQITGPLQRVLKQSLAVAAGQAGDNVH
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQSASGRITAGNDDLSGRSEQAAASLEETAASMEQMTATVRNNADT
ATQASQLAGSTSEAAEKGDAVVGKVVATMGEISASSRKISEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAE
VRTLAQRSANAAKEIAALIHDSAQKTAAGSALVDQAGEAMNDIRSQVARVAGLIGEISSATREQSDGIGQVNVAVTQLDK
MTQQNAALVQESATTADELKRRTQRLVDAVAVFRLNGRAHARRDDARAPRAAPEHAMRERASVARNQPAMRAAPAPSPAL
ASASTANAPARTTAHADMDWQTF
>Mature_583_residues
MRANLPVTQREFDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPDMPAEAFADMWATLKSGRSWT
AVIKNRRKNGDHYWVRANATPVIRNGQLVGYMSVRTKPSREEIAQADALYRDLREHRARGRKFHQGLIVRTGLLGWMSLP
QTISARWRVRAALLTLLAGSAWTAFLCGLHGVMLDGFAATETVLLLLAEFWLAAQITGPLQRVLKQSLAVAAGQAGDNVH
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQSASGRITAGNDDLSGRSEQAAASLEETAASMEQMTATVRNNADT
ATQASQLAGSTSEAAEKGDAVVGKVVATMGEISASSRKISEIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAE
VRTLAQRSANAAKEIAALIHDSAQKTAAGSALVDQAGEAMNDIRSQVARVAGLIGEISSATREQSDGIGQVNVAVTQLDK
MTQQNAALVQESATTADELKRRTQRLVDAVAVFRLNGRAHARRDDARAPRAAPEHAMRERASVARNQPAMRAAPAPSPAL
ASASTANAPARTTAHADMDWQTF

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=524, Percent_Identity=47.5190839694656, Blast_Score=463, Evalue=1e-131,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=54.8821548821549, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI2367378, Length=329, Percent_Identity=52.2796352583587, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1787690, Length=346, Percent_Identity=47.3988439306358, Blast_Score=256, Evalue=4e-69,
Organism=Escherichia coli, GI1788194, Length=320, Percent_Identity=49.0625, Blast_Score=255, Evalue=6e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 62432; Mature: 62432

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANLPVTQREFDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPD
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHEECCEEEEEECCCCHHHHCCCCHHHCCCCC
MPAEAFADMWATLKSGRSWTAVIKNRRKNGDHYWVRANATPVIRNGQLVGYMSVRTKPSR
CCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCEEEECCEEEEEEEECCCCCH
EEIAQADALYRDLREHRARGRKFHQGLIVRTGLLGWMSLPQTISARWRVRAALLTLLAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
AWTAFLCGLHGVMLDGFAATETVLLLLAEFWLAAQITGPLQRVLKQSLAVAAGQAGDNVH
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQSASGRITAGNDDLSGRSEQAAASL
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHH
EETAASMEQMTATVRNNADTATQASQLAGSTSEAAEKGDAVVGKVVATMGEISASSRKIS
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSANAAKEIAALIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
DSAQKTAAGSALVDQAGEAMNDIRSQVARVAGLIGEISSATREQSDGIGQVNVAVTQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
MTQQNAALVQESATTADELKRRTQRLVDAVAVFRLNGRAHARRDDARAPRAAPEHAMRER
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ASVARNQPAMRAAPAPSPALASASTANAPARTTAHADMDWQTF
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRANLPVTQREFDFPDDATLMSTTDPQSYVTYANAAFIQVSGFERDEIIGEPHNFVRHPD
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHEECCEEEEEECCCCHHHHCCCCHHHCCCCC
MPAEAFADMWATLKSGRSWTAVIKNRRKNGDHYWVRANATPVIRNGQLVGYMSVRTKPSR
CCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCEEEECCEEEEEEEECCCCCH
EEIAQADALYRDLREHRARGRKFHQGLIVRTGLLGWMSLPQTISARWRVRAALLTLLAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
AWTAFLCGLHGVMLDGFAATETVLLLLAEFWLAAQITGPLQRVLKQSLAVAAGQAGDNVH
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LNRVDEIGMIMRAVNQAGLNLRSLVDDVSEQLSGLQSASGRITAGNDDLSGRSEQAAASL
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHH
EETAASMEQMTATVRNNADTATQASQLAGSTSEAAEKGDAVVGKVVATMGEISASSRKIS
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSANAAKEIAALIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
DSAQKTAAGSALVDQAGEAMNDIRSQVARVAGLIGEISSATREQSDGIGQVNVAVTQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
MTQQNAALVQESATTADELKRRTQRLVDAVAVFRLNGRAHARRDDARAPRAAPEHAMRER
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ASVARNQPAMRAAPAPSPALASASTANAPARTTAHADMDWQTF
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]