| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718521
Identifier: 83718521
GI number: 83718521
Start: 707132
End: 709069
Strand: Reverse
Name: 83718521
Synonym: BTH_I0619
Alternate gene names: NA
Gene position: 709069-707132 (Counterclockwise)
Preceding gene: 83719906
Following gene: 83718725
Centisome position: 18.61
GC content: 67.39
Gene sequence:
>1938_bases TTGACGCATGCGCGTTGCCACCTATCATCCAATGACTTTCGGTCGGCCGGCCACAATCTTCTCCAAAACAATCACGCGCT TCGAACAACAAGCACGCGGCTAAAGAGGGAAACGCATTTCGATTCACTGAAAAGTTTCACTCCGACATTGCGCAATCCAT CAACTTTCGAAAAGCCCATGAAAAAGATCCTTGGAGATCCGGCTTCGCGCGTTCGCCGCCGCGCGTTTCTCGGCGACATC GCGCGCCTCGCCGGCGCTGGCGTCGTCGCCGGATGGACGCCGATTCGGCCGATTCCCGCCCATGCGCAACCCGCGGGCGC GGCGCCGCCGAATTTTCCCGCCGACATCCCGCTCCACAAGCAGGCGTTTCGCAACTGGAGCGGCGAGATCGCGGTAGCGG ACCTGTGGACCGCCGTGCCCGCGACGCCCGCCGACGTCGTCGCGATCGTCAACTGGGCGGCCTCCAACGGTTATCGCGCA CGGCCGCTCGGCCACATGCACAACTGGTCGCCGCTCACGGTCGCCGGCAACGGAGCGAGCGAGCGCACGATTCTCGTCGA CACGACGACGCATCTGACCGCTGTGTCCGTCGACGCGTCGGCGACGCCCGCGCGCGTCGTCGCGCAAGCGGGCGTATCGC TCGACACGCTGCTCGCGACGCTCGAGCAGCACGGGCTCGGAATGGCGGCGGCGCCCGCGCCCGGCGACATCACGCTCGGC GGCGCGCTCGCAATTGGCGCGCACGGCACCGCGCTGCCGGCGGCGGACGAGACGCGCACGCCCGGGCATACGTACGGCTC GCTCAGCAATGCGGTGCTCGCGCTGACCGCGGTCGTCCACGACGCATCGTCGGGCCGCTACGCGCTTCGCACGTTCGATC GCACCGATCCGGACATCGGCCCGTTTCTCGCGCACGTCGGCCGCGCGTTCGTCGTCGAGGCGACGTTGCAGGTCGGCGCG AATCAGCGGCTGCAATGCGAGAGCTTCGTCGACATTCCGGCCTCCGAACTGTTCGCCCCGGCGGGTTCGCGGGGCCGAAC CGTCGAATCGTTCGTGCGGCGCTCGGGGCGCATCGAGGCGATCTGGTTTCCGTTTACCGACTATCCGTGGCTGAAGGTAT GGACCGTCCGGCCGACCCGGCCGTCCGGCGCGCGCGTCGTCGATCAGCCGTACAACTATCCGTTTTCCGATTCGATATCG CAGCATGTGTCCGATCTGGTGAGCCGCATCGTGCTGAACGGCGAAATCCAGCTGGCGCCGCTCTTCGGAAAAACGCAGTA CACGATCACGTATCTCGGCCTGACAAACATCTTCGGGCCGCGGACGAATCTGTGGGGATGGTCGCGCTCGGTGCTGCACT ACGTGCGGCCGACGACGCTGCGCGTGACCGCGAACGGCTATGCGGTGCTCACGCGCCGCGAGAACGTGCAGCGCGCGATC AACGAGTTCGTCGGCGCGTATCGGCAGCGGATCGCCGACTATCGCGCGGCGGGCCGCTATCCGGTGAACGGCCCCGTCGA GATCCGCGTGACGGGCGTCGATACGCCCGCCGACGTCGGGCCGGGCGCGGTGCCGCCGTCGCTGTCCGCGATCCGGCCGC GGCCCGACCATCCCGACTGGAACGCGGCGATCTGGTTCGACATCCTGACGATACCGGGCACGCCCGACGCGAACCGCTTC TATCGCGAGATCGAGCAGTGGATGCTGTCGAACTACAGCGGCGATTACGCGACCGTGCGGCCGGAATGGTCGAAGGGCTG GGGCTACGCGGACACCGCCGCATGGAGCGACGGCGCGATGCTCGGCACGACGATTCCGGATCTGTTCCGCCTGGGGCTGT CGCCGGCCGATAACTGGGACGCGGCGCTGCGCACGCTCGAGCGCTACGATCCGCGGCGCGTGTTTTCATCGCCGCTGCTC GACCGGCTGATGGGTTGA
Upstream 100 bases:
>100_bases CCGGGCCGCGTTGATTCGTTTCGATTCACATTGATTCGGCGCGGCCGCTCCGCCTCGGCCACCTGTCTTTTTCCCCCGCA CGGTCGACGCATCGATTCGC
Downstream 100 bases:
>100_bases TACGCCCGCCGCGCCGTTCGTCGCGCTCGCCCACCTTGGTGCGCGACGCGATGGCCGCGCGGGCGCGTCGCCGTTACGCG CGCGACGAACGGCGCGCGAC
Product: cholesterol oxidase
Products: NA
Alternate protein names: Oxidoreductase; Cholesterol Oxidase Choa; FAD Linked Oxidase Domain-Containing Protein; Fad-Dependent Oxidoreductase; LOW QUALITY PROTEIN Cholesterol Oxidase
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MTHARCHLSSNDFRSAGHNLLQNNHALRTTSTRLKRETHFDSLKSFTPTLRNPSTFEKPMKKILGDPASRVRRRAFLGDI ARLAGAGVVAGWTPIRPIPAHAQPAGAAPPNFPADIPLHKQAFRNWSGEIAVADLWTAVPATPADVVAIVNWAASNGYRA RPLGHMHNWSPLTVAGNGASERTILVDTTTHLTAVSVDASATPARVVAQAGVSLDTLLATLEQHGLGMAAAPAPGDITLG GALAIGAHGTALPAADETRTPGHTYGSLSNAVLALTAVVHDASSGRYALRTFDRTDPDIGPFLAHVGRAFVVEATLQVGA NQRLQCESFVDIPASELFAPAGSRGRTVESFVRRSGRIEAIWFPFTDYPWLKVWTVRPTRPSGARVVDQPYNYPFSDSIS QHVSDLVSRIVLNGEIQLAPLFGKTQYTITYLGLTNIFGPRTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRAI NEFVGAYRQRIADYRAAGRYPVNGPVEIRVTGVDTPADVGPGAVPPSLSAIRPRPDHPDWNAAIWFDILTIPGTPDANRF YREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDGAMLGTTIPDLFRLGLSPADNWDAALRTLERYDPRRVFSSPLL DRLMG
Sequences:
>Translated_645_residues MTHARCHLSSNDFRSAGHNLLQNNHALRTTSTRLKRETHFDSLKSFTPTLRNPSTFEKPMKKILGDPASRVRRRAFLGDI ARLAGAGVVAGWTPIRPIPAHAQPAGAAPPNFPADIPLHKQAFRNWSGEIAVADLWTAVPATPADVVAIVNWAASNGYRA RPLGHMHNWSPLTVAGNGASERTILVDTTTHLTAVSVDASATPARVVAQAGVSLDTLLATLEQHGLGMAAAPAPGDITLG GALAIGAHGTALPAADETRTPGHTYGSLSNAVLALTAVVHDASSGRYALRTFDRTDPDIGPFLAHVGRAFVVEATLQVGA NQRLQCESFVDIPASELFAPAGSRGRTVESFVRRSGRIEAIWFPFTDYPWLKVWTVRPTRPSGARVVDQPYNYPFSDSIS QHVSDLVSRIVLNGEIQLAPLFGKTQYTITYLGLTNIFGPRTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRAI NEFVGAYRQRIADYRAAGRYPVNGPVEIRVTGVDTPADVGPGAVPPSLSAIRPRPDHPDWNAAIWFDILTIPGTPDANRF YREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDGAMLGTTIPDLFRLGLSPADNWDAALRTLERYDPRRVFSSPLL DRLMG >Mature_644_residues THARCHLSSNDFRSAGHNLLQNNHALRTTSTRLKRETHFDSLKSFTPTLRNPSTFEKPMKKILGDPASRVRRRAFLGDIA RLAGAGVVAGWTPIRPIPAHAQPAGAAPPNFPADIPLHKQAFRNWSGEIAVADLWTAVPATPADVVAIVNWAASNGYRAR PLGHMHNWSPLTVAGNGASERTILVDTTTHLTAVSVDASATPARVVAQAGVSLDTLLATLEQHGLGMAAAPAPGDITLGG ALAIGAHGTALPAADETRTPGHTYGSLSNAVLALTAVVHDASSGRYALRTFDRTDPDIGPFLAHVGRAFVVEATLQVGAN QRLQCESFVDIPASELFAPAGSRGRTVESFVRRSGRIEAIWFPFTDYPWLKVWTVRPTRPSGARVVDQPYNYPFSDSISQ HVSDLVSRIVLNGEIQLAPLFGKTQYTITYLGLTNIFGPRTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRAIN EFVGAYRQRIADYRAAGRYPVNGPVEIRVTGVDTPADVGPGAVPPSLSAIRPRPDHPDWNAAIWFDILTIPGTPDANRFY REIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDGAMLGTTIPDLFRLGLSPADNWDAALRTLERYDPRRVFSSPLLD RLMG
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70288; Mature: 70157
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHARCHLSSNDFRSAGHNLLQNNHALRTTSTRLKRETHFDSLKSFTPTLRNPSTFEKPM CCCCEEECCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH KKILGDPASRVRRRAFLGDIARLAGAGVVAGWTPIRPIPAHAQPAGAAPPNFPADIPLHK HHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QAFRNWSGEIAVADLWTAVPATPADVVAIVNWAASNGYRARPLGHMHNWSPLTVAGNGAS HHHHCCCCCEEEEEHHHHCCCCCHHHEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCC ERTILVDTTTHLTAVSVDASATPARVVAQAGVSLDTLLATLEQHGLGMAAAPAPGDITLG CCEEEEECCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCEEEC GALAIGAHGTALPAADETRTPGHTYGSLSNAVLALTAVVHDASSGRYALRTFDRTDPDIG CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH PFLAHVGRAFVVEATLQVGANQRLQCESFVDIPASELFAPAGSRGRTVESFVRRSGRIEA HHHHHCCHHEEEEEHHHHCCCCCEECHHHCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEE IWFPFTDYPWLKVWTVRPTRPSGARVVDQPYNYPFSDSISQHVSDLVSRIVLNGEIQLAP EEECCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE LFGKTQYTITYLGLTNIFGPRTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRAI EECCCEEEEEEEEHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCEEEEEEHHHHHHHH NEFVGAYRQRIADYRAAGRYPVNGPVEIRVTGVDTPADVGPGAVPPSLSAIRPRPDHPDW HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC NAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDGAM CEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCE LGTTIPDLFRLGLSPADNWDAALRTLERYDPRRVFSSPLLDRLMG ECCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure THARCHLSSNDFRSAGHNLLQNNHALRTTSTRLKRETHFDSLKSFTPTLRNPSTFEKPM CCCEEECCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH KKILGDPASRVRRRAFLGDIARLAGAGVVAGWTPIRPIPAHAQPAGAAPPNFPADIPLHK HHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QAFRNWSGEIAVADLWTAVPATPADVVAIVNWAASNGYRARPLGHMHNWSPLTVAGNGAS HHHHCCCCCEEEEEHHHHCCCCCHHHEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCC ERTILVDTTTHLTAVSVDASATPARVVAQAGVSLDTLLATLEQHGLGMAAAPAPGDITLG CCEEEEECCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCEEEC GALAIGAHGTALPAADETRTPGHTYGSLSNAVLALTAVVHDASSGRYALRTFDRTDPDIG CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH PFLAHVGRAFVVEATLQVGANQRLQCESFVDIPASELFAPAGSRGRTVESFVRRSGRIEA HHHHHCCHHEEEEEHHHHCCCCCEECHHHCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEE IWFPFTDYPWLKVWTVRPTRPSGARVVDQPYNYPFSDSISQHVSDLVSRIVLNGEIQLAP EEECCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE LFGKTQYTITYLGLTNIFGPRTNLWGWSRSVLHYVRPTTLRVTANGYAVLTRRENVQRAI EECCCEEEEEEEEHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCEEEEEEHHHHHHHH NEFVGAYRQRIADYRAAGRYPVNGPVEIRVTGVDTPADVGPGAVPPSLSAIRPRPDHPDW HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC NAAIWFDILTIPGTPDANRFYREIEQWMLSNYSGDYATVRPEWSKGWGYADTAAWSDGAM CEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCE LGTTIPDLFRLGLSPADNWDAALRTLERYDPRRVFSSPLLDRLMG ECCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA