Click here to switch to the map view.

The map label for this gene is omp32 [H]

Identifier: 83718650

GI number: 83718650

Start: 337573

End: 338649

Strand: Direct

Name: omp32 [H]

Synonym: BTH_I0305

Alternate gene names: 83718650

Gene position: 337573-338649 (Clockwise)

Preceding gene: 83719566

Following gene: 83719170

Centisome position: 8.86

GC content: 65.74

Gene sequence:

>1077_bases
ATGAAGTCATCCGTCAGCCGCGCGCTGCAAACCACTTTCGCGTGCGCCGCCGTCGCGGCGCTGGCCGCGGGCGCGCCGAG
CGTTCGCGCGCAATCGAGCGTTCAGCTCTACGGGCAAGTCGACGAATGGATCGGCGCGCAGAAATTTCCGGGCGGGCAGC
GCGCGTGGGGCGTGCAGGGCGGCGGGATGTCGACGTCGTACTGGGGGCTGCGCGGCACGGAGGATCTCGGCGGCGGCTAT
CAGGCGATCTTCACGCTGGAGGATTTCTTCCGCGCGCAGAACGGCCATTACGGCCGCTTCGACGGCGACACGTTCTTCGG
CCGCAACGCCTATGTCGGACTCGCGACGCCGTACGGCACGGTGCGCGCCGGGCGTCTGACGACGCAGCTCTTCGTCTCGA
CGATCCTCTTCAATCCGTTCGTCGATTCGTACGTGTTCTCGCCGATGGTGTACCACGTGTTCCTCGGCCTCGGCACGTTC
CCGACGTATACGACCGATCAGGGCGTGGTCGGCGATTCGGGCTGGAACAACGCGATCGACTACACGAGCCCGAGCTTCGG
CGGCTTCAACGCGGCCGCGATGTACGCGTTCGGCAATACGGCGGGCGACAACCGCTCGAAGAAGTGGAGCGGCCAGCTGA
ACTATTCGAACGGCCCGTTCGCGGCGACGGCGGTCTATCAATACGTGAACTTCAACGGCGGCCCGGGCGATCTCGGCGCG
CTCGTGTCGGGGATGAAGAGCCAGGGCGTCGCGCAGGTCGGCCTGTCGTACGACTTCAAGCTTGCGAAGATCTACGCGCA
ATACATGTATACGAACAACGAGCGCAACGCCGGCAACTGGCACGTGAACACCGTGCAAGGCGGCGTGGCGGTGCCGCTCG
GGCCGGGCAGCGCGCTCGCGTCGTACGCGTATTCGCGTGATTCGGGCGGGCTCGATCAGACGCGTCGCACGTGGGCGCTC
GGCTACGACTACCCGCTGTCGAAGCGCACCGACCTGTACGCGGCGTACATGAACGATCGCTACTCGGGCATGTCGAGCGG
CGACACGTTCGGCGCGGGAATTCGTGCGAAGTTCTAA

Upstream 100 bases:

>100_bases
ATGGCTCGGGAAGATGGCGACGCCCCCGAACGGCATCGCGTCTTCCGGACGTCGCCCGCCCGTTCGCCTCGCTTCCGTTA
GACGACAATCTGGAGATCAC

Downstream 100 bases:

>100_bases
CCAATCGGAACCCGGGCGCGCACTGTCCGGGCGATGCACGAAAAAGTGAGCGGCGTCACATTAAACGGCGCCGTTTTGCC
TTTTTTGACGTTTTCAATTC

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSSVSRALQTTFACAAVAALAAGAPSVRAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQGGGMSTSYWGLRGTEDLGGGY
QAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGTVRAGRLTTQLFVSTILFNPFVDSYVFSPMVYHVFLGLGTF
PTYTTDQGVVGDSGWNNAIDYTSPSFGGFNAAAMYAFGNTAGDNRSKKWSGQLNYSNGPFAATAVYQYVNFNGGPGDLGA
LVSGMKSQGVAQVGLSYDFKLAKIYAQYMYTNNERNAGNWHVNTVQGGVAVPLGPGSALASYAYSRDSGGLDQTRRTWAL
GYDYPLSKRTDLYAAYMNDRYSGMSSGDTFGAGIRAKF

Sequences:

>Translated_358_residues
MKSSVSRALQTTFACAAVAALAAGAPSVRAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQGGGMSTSYWGLRGTEDLGGGY
QAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGTVRAGRLTTQLFVSTILFNPFVDSYVFSPMVYHVFLGLGTF
PTYTTDQGVVGDSGWNNAIDYTSPSFGGFNAAAMYAFGNTAGDNRSKKWSGQLNYSNGPFAATAVYQYVNFNGGPGDLGA
LVSGMKSQGVAQVGLSYDFKLAKIYAQYMYTNNERNAGNWHVNTVQGGVAVPLGPGSALASYAYSRDSGGLDQTRRTWAL
GYDYPLSKRTDLYAAYMNDRYSGMSSGDTFGAGIRAKF
>Mature_358_residues
MKSSVSRALQTTFACAAVAALAAGAPSVRAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQGGGMSTSYWGLRGTEDLGGGY
QAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGTVRAGRLTTQLFVSTILFNPFVDSYVFSPMVYHVFLGLGTF
PTYTTDQGVVGDSGWNNAIDYTSPSFGGFNAAAMYAFGNTAGDNRSKKWSGQLNYSNGPFAATAVYQYVNFNGGPGDLGA
LVSGMKSQGVAQVGLSYDFKLAKIYAQYMYTNNERNAGNWHVNTVQGGVAVPLGPGSALASYAYSRDSGGLDQTRRTWAL
GYDYPLSKRTDLYAAYMNDRYSGMSSGDTFGAGIRAKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38404; Mature: 38404

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSVSRALQTTFACAAVAALAAGAPSVRAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCEEEEECC
GGMSTSYWGLRGTEDLGGGYQAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGT
CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCC
VRAGRLTTQLFVSTILFNPFVDSYVFSPMVYHVFLGLGTFPTYTTDQGVVGDSGWNNAID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTSPSFGGFNAAAMYAFGNTAGDNRSKKWSGQLNYSNGPFAATAVYQYVNFNGGPGDLGA
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHH
LVSGMKSQGVAQVGLSYDFKLAKIYAQYMYTNNERNAGNWHVNTVQGGVAVPLGPGSALA
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCHHHH
SYAYSRDSGGLDQTRRTWALGYDYPLSKRTDLYAAYMNDRYSGMSSGDTFGAGIRAKF
HHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKSSVSRALQTTFACAAVAALAAGAPSVRAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCEEEEECC
GGMSTSYWGLRGTEDLGGGYQAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGT
CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCC
VRAGRLTTQLFVSTILFNPFVDSYVFSPMVYHVFLGLGTFPTYTTDQGVVGDSGWNNAID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTSPSFGGFNAAAMYAFGNTAGDNRSKKWSGQLNYSNGPFAATAVYQYVNFNGGPGDLGA
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHH
LVSGMKSQGVAQVGLSYDFKLAKIYAQYMYTNNERNAGNWHVNTVQGGVAVPLGPGSALA
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCHHHH
SYAYSRDSGGLDQTRRTWALGYDYPLSKRTDLYAAYMNDRYSGMSSGDTFGAGIRAKF
HHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]