| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pheT [H]
Identifier: 83718629
GI number: 83718629
Start: 2951911
End: 2954343
Strand: Reverse
Name: pheT [H]
Synonym: BTH_I2590
Alternate gene names: 83718629
Gene position: 2954343-2951911 (Counterclockwise)
Preceding gene: 161723166
Following gene: 83720646
Centisome position: 77.56
GC content: 66.71
Gene sequence:
>2433_bases ATGCAATTCCCTGAATCCTGGTTGAGAACCTTTGTCGATCCGCAGTTGACGACGGACGAGCTGTCGCACGCGCTGACGAT GGCGGGGCTCGAGGTCGAATCGCTGCGCCCGGCCGCGCCGCCGACCGAGAAGATCGTCGTCGGCCGCGTGCTCGAGGTGG TCAAGCATCCGGATGCCGACAAGCTCAACGTCTGCCAGGTCGACGCCGGCACCGGCGCGACGCTGCAGATCGTCTGCGGC GCGCCGAATGTCGCGCCGGGCATCAAGGTGCCGGTCGCGCTCGTCGGCGCGAAGCTGCCGCCCGCCGAGGAAGGCGGCGC GCCGTTCGCGATCAAGCTGTCGAAGCTGCGCGGCGTCGAGAGCCAGGGGATGCTCTGCTCGGCGCGCGAGCTGAAGCTGT CCGAAGATCACGGCGGACTCATGATCCTGCCCGAGGACACGCCCGTCGGCCAGGACATCCGTGACGCGCTGAATCTCGAC GACACCGTCTTCGAAATCAAGCTGACGCCGAACAAGGCGGACTGTCTGTCCGTGTTCGGCATCGCGCGGGAGACGGCCGC GATCACGGGTGCGCCGCTCGCCGCGCCCGACATTCGTCCGGTGCGCGCCGAGCTGACCGAGACGCTGCCCGTGAAGATTT CCGCGCCCGATCTGTGCGGGCGCTTTTCCGGCCGCGTGATCCGCGGTGTGAACGCGCGCGCGAAGACGCCGCGCTGGATG GTCGAGCGCCTCGAGCGCGCGGGCCAGCGCAGCGTATCGGCGCTCGTCGACATCTCGAACTACGTGATGTTCGAGCTGGG CCGCCCGTCGCACGTGTTCGATCTGGACAAGATCCACGGCGGCATCGACGTGCGCTGGGGCAAGCGCGGCGAGTCGTTGA AACTGCTGAACGGCAACACCGTCGAGCTCGACGAGACGGTCGGCGTGATTTCCGACGACGCCCAAGTCGAAAGCCTCGCG GGCATCATGGGCGGCGACAGCACGGCCGTGACGCTCGACACGACGAACATCTATCTCGAAGCGGCGTTCTGGTGGCCGGA CAGCATCCGCGGCCGTGCGCGCAAGTACAACTTCTCGACCGACGCGGCGCATCGCTTCGAGCGCGGCGTCGATTATTCGA CGACCGTCGAGCACGTCGAGCGGATCACGCAGTTGATCCTCGACATCTGCGGCGGCCAGGCGGGCCCCGTCGACGACCAG ATCGTGAACCTGCCGCAGCGCGCGCCGGTTTCGATGCGTGCGTCGCGCGCGAACCGGATCATCGGCGTCGAGATCGACAA GGACGAAATCGCGCAGATCTTCACGCGTCTTGGCCTCGCGTTCGAACGCGACGGCGACGTGTTCCGCGTGACGCCGCCGC CGCACCGCTTCGATATCGAGATCGAAGAGGATCTGATCGAGGAAGTCGCGCGGATTTACGGCTTCGAGAAGATTCCCGCG CGTCCGCCCGTCGCGCGAAGCGAGATGCGCGCGACCGACGAGACGCGCCGCTCGGTCCACGCGATCCGTCACGCGCTTGC CGCGCGCGACTATGCGGAAACGGTCAACTTCAGCTTCGTCGATGCCGAATGGGAGCGCGATTTCGCCGGCAACGACAACC CGGTGCGCCTGCTGAACCCGATCGCGAGCCAGCTGTCGGTGATGCGCACGACGCTGTTCGGCAGCCTCGTCGGCGTGCTG CGCCACAACCTGAACCGCCGCGCCGAGCGCGTGCGCGTGTTCGAAGCGGGGCGCGTGTTCATCGCCGATCCGGCGGTGAA GGCGGGCGAGCTCGCGGTCGAAGGTTATGCGCAGCCGAAGCGCATCGGCGCGCTTGCGTACGGGCCGGTCGTCGACGAGC AATGGGGCGCGACGACGCGCCAGGTCGATTACTTCGATGTGAAGGGCGATCTCGAGGCGCTGCTTGCGCCCGTCGTCGCG CGCTTCGTGAAGGCCGAGCACTCGGCGCTGCATCCGGGGCGCGGCGCGCGGATCGAGGTCGACGGCCGCGCGGTCGGCTG GATTGGCGAACTGCATCCGCGCCTGATGCAGAAGTACGAGCTGCCGCACGCGCCCGTGATGTTCGAGATCGACGCGGATG CGCTTGTCGCGCGCGCGCTGCCGGCGCCGTCGGAGGTGTCGAAGTTCCCGCCGGTGCGTCGCGACATCGCGGTCGTCGTC GATCAGAAGGTCGAAGTGCAGGCACTTTTCGACGAGATGAAGAAGGCGCTTGCCGAGGACGCGTGCAAATTCGTCCAGAA AGTTGCGCTCTTCGATGAATTTCGTGCAAAATCAAATACTTCCAGTGGGATGTCAGCCCACGAGAAAAGCCTTGCGTTCC GCGTCACGCTCCAGGATGCGGCCGGAACCCTGCAGGACGAGACGGTCGATCAGGCGATTCAGACCCTCGTGGACCGCATG GCTCGAGTCTATGGCGCGCGTTTGCGCGGATAG
Upstream 100 bases:
>100_bases GCAGTTCGCGTAACGGCGCGACCGTCCCGCTCCGCGCCCGGCCGGCCCGTCGAGGCGGCGCGCCGGGCCTCGATCTAACC TGTTTCGAACGTGGATATCC
Downstream 100 bases:
>100_bases GGCGCAAAAGCGGCGGAAGTCGCCGCTTTTGTCAGTGTTTTTGTCCAAGTTTGACGCGCTAGTTTTGCACATATGAACGA CATGAACTCGAGTGAATTTG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 810; Mature: 810
Protein sequence:
>810_residues MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTEKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLQIVCG APNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRGVESQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLD DTVFEIKLTPNKADCLSVFGIARETAAITGAPLAAPDIRPVRAELTETLPVKISAPDLCGRFSGRVIRGVNARAKTPRWM VERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLLNGNTVELDETVGVISDDAQVESLA GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVDDQ IVNLPQRAPVSMRASRANRIIGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYGFEKIPA RPPVARSEMRATDETRRSVHAIRHALAARDYAETVNFSFVDAEWERDFAGNDNPVRLLNPIASQLSVMRTTLFGSLVGVL RHNLNRRAERVRVFEAGRVFIADPAVKAGELAVEGYAQPKRIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVA RFVKAEHSALHPGRGARIEVDGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALVARALPAPSEVSKFPPVRRDIAVVV DQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSSGMSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRM ARVYGARLRG
Sequences:
>Translated_810_residues MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTEKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLQIVCG APNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRGVESQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLD DTVFEIKLTPNKADCLSVFGIARETAAITGAPLAAPDIRPVRAELTETLPVKISAPDLCGRFSGRVIRGVNARAKTPRWM VERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLLNGNTVELDETVGVISDDAQVESLA GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVDDQ IVNLPQRAPVSMRASRANRIIGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYGFEKIPA RPPVARSEMRATDETRRSVHAIRHALAARDYAETVNFSFVDAEWERDFAGNDNPVRLLNPIASQLSVMRTTLFGSLVGVL RHNLNRRAERVRVFEAGRVFIADPAVKAGELAVEGYAQPKRIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVA RFVKAEHSALHPGRGARIEVDGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALVARALPAPSEVSKFPPVRRDIAVVV DQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSSGMSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRM ARVYGARLRG >Mature_810_residues MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTEKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLQIVCG APNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRGVESQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLD DTVFEIKLTPNKADCLSVFGIARETAAITGAPLAAPDIRPVRAELTETLPVKISAPDLCGRFSGRVIRGVNARAKTPRWM VERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLLNGNTVELDETVGVISDDAQVESLA GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVDDQ IVNLPQRAPVSMRASRANRIIGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYGFEKIPA RPPVARSEMRATDETRRSVHAIRHALAARDYAETVNFSFVDAEWERDFAGNDNPVRLLNPIASQLSVMRTTLFGSLVGVL RHNLNRRAERVRVFEAGRVFIADPAVKAGELAVEGYAQPKRIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVA RFVKAEHSALHPGRGARIEVDGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALVARALPAPSEVSKFPPVRRDIAVVV DQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSSGMSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRM ARVYGARLRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI124028525, Length=407, Percent_Identity=24.5700245700246, Blast_Score=86, Evalue=1e-16, Organism=Escherichia coli, GI1788006, Length=817, Percent_Identity=41.2484700122399, Blast_Score=615, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6323089, Length=430, Percent_Identity=23.7209302325581, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88822; Mature: 88822
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTEKIVVGRVLEVVKHPDAD CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC KLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRGVE CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHCCCC SQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLDDTVFEIKLTPNKADCLSVFG CCCCEEEHHHCEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHH IARETAAITGAPLAAPDIRPVRAELTETLPVKISAPDLCGRFSGRVIRGVNARAKTPRWM HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEECCCHHHHHCCCCEEECCCCCCCCHHHH VERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLLNGNT HHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEHHHHCCCEEEEECCCCCEEEEECCCE VELDETVGVISDDAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST EEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECEEEEEEEEECCHHHCCCCEECCCCC DAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVDDQIVNLPQRAPVSMRASRANRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHCCCCE IGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYGFEKIPA EEEEECHHHHHHHHHHHCCEEECCCCEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCC RPPVARSEMRATDETRRSVHAIRHALAARDYAETVNFSFVDAEWERDFAGNDNPVRLLNP CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHH IASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFIADPAVKAGELAVEGYAQPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCCCEEECCCCCCH RIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVARFVKAEHSALHPGRGARIEV HHCEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE DGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALVARALPAPSEVSKFPPVRRDIAVVV CCCEEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCHHHHHCCCCHHCCEEEE DQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSSGMSAHEKSLAFRVTLQDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEEHHH AGTLQDETVDQAIQTLVDRMARVYGARLRG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTEKIVVGRVLEVVKHPDAD CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC KLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRGVE CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHCCCC SQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLDDTVFEIKLTPNKADCLSVFG CCCCEEEHHHCEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHH IARETAAITGAPLAAPDIRPVRAELTETLPVKISAPDLCGRFSGRVIRGVNARAKTPRWM HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEECCCHHHHHCCCCEEECCCCCCCCHHHH VERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLLNGNT HHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEHHHHCCCEEEEECCCCCEEEEECCCE VELDETVGVISDDAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST EEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECEEEEEEEEECCHHHCCCCEECCCCC DAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVDDQIVNLPQRAPVSMRASRANRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHCCCCE IGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYGFEKIPA EEEEECHHHHHHHHHHHCCEEECCCCEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCC RPPVARSEMRATDETRRSVHAIRHALAARDYAETVNFSFVDAEWERDFAGNDNPVRLLNP CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHH IASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFIADPAVKAGELAVEGYAQPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCCCEEECCCCCCH RIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVARFVKAEHSALHPGRGARIEV HHCEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE DGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALVARALPAPSEVSKFPPVRRDIAVVV CCCEEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCHHHHHCCCCHHCCEEEE DQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSSGMSAHEKSLAFRVTLQDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEEHHH AGTLQDETVDQAIQTLVDRMARVYGARLRG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA