| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mopB [H]
Identifier: 83718483
GI number: 83718483
Start: 29994
End: 30668
Strand: Direct
Name: mopB [H]
Synonym: BTH_I0029
Alternate gene names: 83718483
Gene position: 29994-30668 (Clockwise)
Preceding gene: 83721171
Following gene: 284159406
Centisome position: 0.79
GC content: 77.19
Gene sequence:
>675_bases ATGACACCGCGCATCGCGCCGTCCGTCTCGCCGTCCGTTTCATTGCGCCGGTCGGCCGCGCGCGCGCTCGCGGCGGCGCC GCGCCGCATGCGTCGCGCGCCCGCTTCGCTTGCCGCGCTCGCAATCGGCGCGGCGGCGCTGCCCGCATCGGCCGCCGACA TGGACGCGGTGAATCACGCGGCGTCGCTCGCATCGGGCGTCGTCGTCGGCTCGGCCGCGCCGTCGCTCGGCGTCGGCGCG GTGGTGCAGACGCTCGTCGGGCTCGCGGTCGTGATCGGCCTCGTGTTCGGCTGCGCGTGGCTCGCGCGGCGCTTCGGCTT CCAGCCGCAACGCCGCGGCGGCGCGCTGAAGGTCGTCGCGAGCGTCGCGGTGGGCGGCAAGGAGAGCGCGACCGTCGTCG AGATCGGCGACACCTGGCTCGTGCTCGGCGTCGCGCCCGGCAACGTGCGCCTGCTGCACACGCTGCCCGCCGGCTCGGCG GGCGTGATCGGCGCACCCGTCGCACCCGGCGTCGCGCCCGCGGGCGGCGGCCTGCCTCGTGCGCCAGGCGCGCCGGGCGG CACGGCGAGGTCCGGCCCGTTCCCCGAGGGCGCTTCCTTCGGGGCGCGCTTTCGCGACGCGATGCTCGGCGAGGCCGCGA AGCGTTTCAAGCGCGACGGCGGCAAGGATCGCTGA
Upstream 100 bases:
>100_bases GCCTGATCGCGCAGGGCGAGGTGGTCGTCGTCAACGACAAGTTCGGCATCCGGCTCACCGACATCATCACGCCGTCCGAA CGCATCCGGAAGCTGAACCG
Downstream 100 bases:
>100_bases CATGCCGCGCCTTCGTTTCGTCGCGCCGCGCGCGGATGCCGCCGCACGCGCCCACTCCGACAGCCGTTCGATGAAAACCG CTTTCCTGCGCGGCGCCGCA
Product: flagellar biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTPRIAPSVSPSVSLRRSAARALAAAPRRMRRAPASLAALAIGAAALPASAADMDAVNHAASLASGVVVGSAAPSLGVGA VVQTLVGLAVVIGLVFGCAWLARRFGFQPQRRGGALKVVASVAVGGKESATVVEIGDTWLVLGVAPGNVRLLHTLPAGSA GVIGAPVAPGVAPAGGGLPRAPGAPGGTARSGPFPEGASFGARFRDAMLGEAAKRFKRDGGKDR
Sequences:
>Translated_224_residues MTPRIAPSVSPSVSLRRSAARALAAAPRRMRRAPASLAALAIGAAALPASAADMDAVNHAASLASGVVVGSAAPSLGVGA VVQTLVGLAVVIGLVFGCAWLARRFGFQPQRRGGALKVVASVAVGGKESATVVEIGDTWLVLGVAPGNVRLLHTLPAGSA GVIGAPVAPGVAPAGGGLPRAPGAPGGTARSGPFPEGASFGARFRDAMLGEAAKRFKRDGGKDR >Mature_223_residues TPRIAPSVSPSVSLRRSAARALAAAPRRMRRAPASLAALAIGAAALPASAADMDAVNHAASLASGVVVGSAAPSLGVGAV VQTLVGLAVVIGLVFGCAWLARRFGFQPQRRGGALKVVASVAVGGKESATVVEIGDTWLVLGVAPGNVRLLHTLPAGSAG VIGAPVAPGVAPAGGGLPRAPGAPGGTARSGPFPEGASFGARFRDAMLGEAAKRFKRDGGKDR
Specific function: Required for both, motility and virulence [H]
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein. Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliO/mopB family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022781 [H]
Pfam domain/function: PF04347 FliO [H]
EC number: NA
Molecular weight: Translated: 22016; Mature: 21885
Theoretical pI: Translated: 12.34; Mature: 12.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRIAPSVSPSVSLRRSAARALAAAPRRMRRAPASLAALAIGAAALPASAADMDAVNHA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHH ASLASGVVVGSAAPSLGVGAVVQTLVGLAVVIGLVFGCAWLARRFGFQPQRRGGALKVVA HHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHH SVAVGGKESATVVEIGDTWLVLGVAPGNVRLLHTLPAGSAGVIGAPVAPGVAPAGGGLPR HHHCCCCCCCEEEEECCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC APGAPGGTARSGPFPEGASFGARFRDAMLGEAAKRFKRDGGKDR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TPRIAPSVSPSVSLRRSAARALAAAPRRMRRAPASLAALAIGAAALPASAADMDAVNHA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHH ASLASGVVVGSAAPSLGVGAVVQTLVGLAVVIGLVFGCAWLARRFGFQPQRRGGALKVVA HHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHH SVAVGGKESATVVEIGDTWLVLGVAPGNVRLLHTLPAGSAGVIGAPVAPGVAPAGGGLPR HHHCCCCCCCEEEEECCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC APGAPGGTARSGPFPEGASFGARFRDAMLGEAAKRFKRDGGKDR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8412685 [H]