| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718455
Identifier: 83718455
GI number: 83718455
Start: 3751526
End: 3752224
Strand: Reverse
Name: 83718455
Synonym: BTH_I3297
Alternate gene names: NA
Gene position: 3752224-3751526 (Counterclockwise)
Preceding gene: 83718998
Following gene: 83719334
Centisome position: 98.5
GC content: 71.53
Gene sequence:
>699_bases ATGACTTCGCGACATGTTCAGGTTTGGGCGCCGCGCGAGAAGCCGATCGCGCAGCCGCAGCCGGCCTTGCGCCGCCGTCC GCGGCAGCGCCGCGCGCACGCGAGTTCGCAGGCGTTGCAGGAGGCCTTTGTTCGGGTTTTGCTCGAGCGCGGCTACGCGA AGGCGACGATTCGCGAGATCGCCGCGGTCGCGGGCGTGAGCGTCGGCACGTTTTACGAGTATTTCGGCGACAAGGAGAGC CTCGCCGCGCTCACGATCCATCATTACGTGAAGGCGCTCGCGGCGCGGATGCGCACGGTCGTCGATGCGCGGCGCGGCGC GGATTGCCGGGCTGTCGCGGCCGCGCTCGTCGAGGCGCAGATCGATGCGCTCGCGCAGGACGCTCGCGTGTGGGCCGCGA TGTTGACGATCGAGCGCACGGTTTCGCCGATCGGCGCGTATCGCCGGCATTACGACGATTACGTCGCGTTGTGGCGCGAT GCGCTCGCCGGCGCGAGCGACGCGCCGGCCGATGCGCGGCTCGACGTGACGGCGCGCGTCGCGCATGCGCTGTGCTACGG GTGGGTGTCGCAATCGCTGCTGATGCAGGGCGCGGACGTCGACGTCGCGCAATTGCGCGGCGAGCTGCATCGGGCGGTGG ACGCGTATCTCGCGGCCTCGGCGGCCGGCGGCGCGGGAGGCCGCGCGGCGGGCGGGTGA
Upstream 100 bases:
>100_bases ATAGTCGGTCAATTCGTCGAACTGGTTGCTCACCTCGTGGGTCGACCAGGCCATGATGGGCGTCTCCTTGTCGTTGTTCG GCTCGATCAGGTTAGCAAAG
Downstream 100 bases:
>100_bases ATCGCGGGGCTTGCCGTCGAAGTCCCGGAGGCCCGCGTTTGCGCGATGCGCGCCGGTGGCCTGCCGTTGGCGGACGCGGC GGCGGCGATCCCGGCGCGTT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTSRHVQVWAPREKPIAQPQPALRRRPRQRRAHASSQALQEAFVRVLLERGYAKATIREIAAVAGVSVGTFYEYFGDKES LAALTIHHYVKALAARMRTVVDARRGADCRAVAAALVEAQIDALAQDARVWAAMLTIERTVSPIGAYRRHYDDYVALWRD ALAGASDAPADARLDVTARVAHALCYGWVSQSLLMQGADVDVAQLRGELHRAVDAYLAASAAGGAGGRAAGG
Sequences:
>Translated_232_residues MTSRHVQVWAPREKPIAQPQPALRRRPRQRRAHASSQALQEAFVRVLLERGYAKATIREIAAVAGVSVGTFYEYFGDKES LAALTIHHYVKALAARMRTVVDARRGADCRAVAAALVEAQIDALAQDARVWAAMLTIERTVSPIGAYRRHYDDYVALWRD ALAGASDAPADARLDVTARVAHALCYGWVSQSLLMQGADVDVAQLRGELHRAVDAYLAASAAGGAGGRAAGG >Mature_231_residues TSRHVQVWAPREKPIAQPQPALRRRPRQRRAHASSQALQEAFVRVLLERGYAKATIREIAAVAGVSVGTFYEYFGDKESL AALTIHHYVKALAARMRTVVDARRGADCRAVAAALVEAQIDALAQDARVWAAMLTIERTVSPIGAYRRHYDDYVALWRDA LAGASDAPADARLDVTARVAHALCYGWVSQSLLMQGADVDVAQLRGELHRAVDAYLAASAAGGAGGRAAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25042; Mature: 24911
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRHVQVWAPREKPIAQPQPALRRRPRQRRAHASSQALQEAFVRVLLERGYAKATIREI CCCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAVAGVSVGTFYEYFGDKESLAALTIHHYVKALAARMRTVVDARRGADCRAVAAALVEAQ HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IDALAQDARVWAAMLTIERTVSPIGAYRRHYDDYVALWRDALAGASDAPADARLDVTARV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AHALCYGWVSQSLLMQGADVDVAQLRGELHRAVDAYLAASAAGGAGGRAAGG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSRHVQVWAPREKPIAQPQPALRRRPRQRRAHASSQALQEAFVRVLLERGYAKATIREI CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAVAGVSVGTFYEYFGDKESLAALTIHHYVKALAARMRTVVDARRGADCRAVAAALVEAQ HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IDALAQDARVWAAMLTIERTVSPIGAYRRHYDDYVALWRDALAGASDAPADARLDVTARV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AHALCYGWVSQSLLMQGADVDVAQLRGELHRAVDAYLAASAAGGAGGRAAGG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA