| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hemY [C]
Identifier: 83718445
GI number: 83718445
Start: 998117
End: 999307
Strand: Direct
Name: hemY [C]
Synonym: BTH_I0874
Alternate gene names: 83718445
Gene position: 998117-999307 (Clockwise)
Preceding gene: 83720469
Following gene: 83719325
Centisome position: 26.2
GC content: 70.61
Gene sequence:
>1191_bases ATGACGCTGCGTGGAATCATTTGGCTCGCCGTGCTGTTCGCGATCGCCGCGGCGCTCGCGACGGTCGGGCGCTTCGATGC CGGCCAGGTGCTGATCGTCTATCCGCCGTATCGCATCGACGTGTCGCTGAACTTCTTCGTGCTCGCGATCATCGTCGCGT TCATCGCGCTGTACGCGCTGATGCGGATCGTGCGCAACGTGTGGCGGATGCCGCAGCGCGTGGCCGCGTATCGCGCGCGG ATGCGCAACGAGCGCGCGCATGCTTCGTTGCGCGATGCGCTCGCGAACCTCTACGCGGGCCGCTTCTCGCGCGCGGAGAA GGCCGCGCGCGATGCGCTCGCGGTCGACGCGAACCAGGCCGCGGCGAGCCTCATCGCCGCGGCCGCGACGCACCGGATGC ACGAGTACGCGCGGCGCGACGAATGGCTCGCGAAGGTGAACGGCCAGGAATGGCAGGACGCGCGCCTGCTCGCGACGGCC GACATGCGCGCGGACGGGCGCGACGCCGAGGGCGCGCTCGCCGCGCTCGCCGAGATGCAGGCGTCGGGCGGCAAGCGGAT CCACGCGCAGCAGATCGCGCTGCGCGCGCAGCAGCAGAACAAGAACTGGAGCGAGGTGCTGAAGATCGCGAAGGCGCTCG AAAAGCGCGAGGCGCTGCACCCGGCCGCGGCCGTGCGGCTGCGCCAGCAAGCGGCCGAGCATCTGCTGCGCGATCGCCGG CACGACGCGGACGCGCTTCTCGAAGTGTGGCAGACGCTGTCGGCCACCGAGCGGCAGTCGCCGCGCCTCGCGGATCTCGC CGCCGAACTGCTGATCGCGCTCGAGCGCCGTCAGGAAGCGCGGCGGATCGTCGAGGACGCGCTCGCGCACAACTGGAACG CGCGCCTGCTGCGCCGCTATCCGGATACGGCGGGCGCTGACGCGCTGCCGCTGATCCAGAAGGCCGAGGGCTGGCGACGC GAGCGTCCGGACGACGCGGACCTGCTGTTCGCGCTCGGCCGCTTGTGCCAGCAGCAGCAACTGTGGGGCAAGGCGCAATC GTTCCTCGAATCGGCGCTGAAGCTTGCCGACGACGAGCCGCTCAAGATTCGCGCGCATCGCGCGCTCGCGCGCCTGTTCG AGCACCTCGGCGAAACCGACAAGGCCGCGCAGCACTATCGCGAAAGCGCGCTCGCGATCACGGTCGTGTGA
Upstream 100 bases:
>100_bases CTGCTCAAGCAGGTCGACGCCGCGTCGCTCACGGTCGCGGTGCCGAACCTCAACACGAGCCTGAACGCGGTTCAACAGTT CAAGAGCCGGGGTTGACGCC
Downstream 100 bases:
>100_bases GCGCTCGGGCAGCAGGCGCTTTCCGGCGTGCTTGATGCGCGACGGCAGGCGGTGGAATCGAAAAAACGGCGGCCTCGACG GCCGCCGTTTTCGTTGGGGT
Product: HemY protein N-terminus family protein
Products: NA
Alternate protein names: HemY Protein; HemY Domain-Containing Protein; Protein Porphyrin Biosynthesis; HemY-Like; HemY-Like Protein; HemY N-Terminal Domain Protein; HemY N-Terminal; Protoheme Ix Synthesis Protein; Porphyrin Biosynthesis Protein; Protoheme IX Synthesis Protein; HemY N-Terminal Domain-Containing Protein; Metal Dependent Phosphohydrolase; HemY Protein N-Terminus Family Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTLRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMRIVRNVWRMPQRVAAYRAR MRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAASLIAAAATHRMHEYARRDEWLAKVNGQEWQDARLLATA DMRADGRDAEGALAALAEMQASGGKRIHAQQIALRAQQQNKNWSEVLKIAKALEKREALHPAAAVRLRQQAAEHLLRDRR HDADALLEVWQTLSATERQSPRLADLAAELLIALERRQEARRIVEDALAHNWNARLLRRYPDTAGADALPLIQKAEGWRR ERPDDADLLFALGRLCQQQQLWGKAQSFLESALKLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESALAITVV
Sequences:
>Translated_396_residues MTLRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMRIVRNVWRMPQRVAAYRAR MRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAASLIAAAATHRMHEYARRDEWLAKVNGQEWQDARLLATA DMRADGRDAEGALAALAEMQASGGKRIHAQQIALRAQQQNKNWSEVLKIAKALEKREALHPAAAVRLRQQAAEHLLRDRR HDADALLEVWQTLSATERQSPRLADLAAELLIALERRQEARRIVEDALAHNWNARLLRRYPDTAGADALPLIQKAEGWRR ERPDDADLLFALGRLCQQQQLWGKAQSFLESALKLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESALAITVV >Mature_395_residues TLRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMRIVRNVWRMPQRVAAYRARM RNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAASLIAAAATHRMHEYARRDEWLAKVNGQEWQDARLLATAD MRADGRDAEGALAALAEMQASGGKRIHAQQIALRAQQQNKNWSEVLKIAKALEKREALHPAAAVRLRQQAAEHLLRDRRH DADALLEVWQTLSATERQSPRLADLAAELLIALERRQEARRIVEDALAHNWNARLLRRYPDTAGADALPLIQKAEGWRRE RPDDADLLFALGRLCQQQQLWGKAQSFLESALKLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESALAITVV
Specific function: Involved In A Late Step Of Protoheme IX Synthesis. [C]
COG id: COG3071
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44486; Mature: 44354
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYAL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH MRIVRNVWRMPQRVAAYRARMRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AASLIAAAATHRMHEYARRDEWLAKVNGQEWQDARLLATADMRADGRDAEGALAALAEMQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCHHHHHHHHHHHH ASGGKRIHAQQIALRAQQQNKNWSEVLKIAKALEKREALHPAAAVRLRQQAAEHLLRDRR HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HDADALLEVWQTLSATERQSPRLADLAAELLIALERRQEARRIVEDALAHNWNARLLRRY CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC PDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESALKLADDEP CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LKIRAHRALARLFEHLGETDKAAQHYRESALAITVV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEC >Mature Secondary Structure TLRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYAL CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH MRIVRNVWRMPQRVAAYRARMRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AASLIAAAATHRMHEYARRDEWLAKVNGQEWQDARLLATADMRADGRDAEGALAALAEMQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCHHHHHHHHHHHH ASGGKRIHAQQIALRAQQQNKNWSEVLKIAKALEKREALHPAAAVRLRQQAAEHLLRDRR HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HDADALLEVWQTLSATERQSPRLADLAAELLIALERRQEARRIVEDALAHNWNARLLRRY CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC PDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESALKLADDEP CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LKIRAHRALARLFEHLGETDKAAQHYRESALAITVV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA