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The map label for this gene is perR [H]

Identifier: 83595117

GI number: 83595117

Start: 4339496

End: 4339909

Strand: Direct

Name: perR [H]

Synonym: Rru_A3788

Alternate gene names: 83595117

Gene position: 4339496-4339909 (Clockwise)

Preceding gene: 83595116

Following gene: 83595119

Centisome position: 99.69

GC content: 55.8

Gene sequence:

>414_bases
ATGAACCATCATCGTCCGTTCAGGCCTATCCTGGAAAAATTAAGAAAAGCGGGTCTGCGCCCGACGCGTCAGCGTCTGGC
CTTGGCCCGGTTAATGTTCGATGCCGGAAACCGTCATGTGACGGCTGAAACCCTGCATACCGAAGCGATGGATGCGGGCG
TTTCCGTATCTCTGGCTACCGTCTACAATACGTTGCATCAATTCACAGAAGGTGGACTTTTGCGCGAAGTGGTCGTTGAC
CCCGGCCGCTCCTATTTCGATACCAATACCTCCGAGCACTATCACTTCTACTTCGAGGTTTCGGGGGAGCTGGTGGATAT
TCCGGCCTCCGACGTCAACATCGACCGCCTGCCCGAGATCCCGGCCGGCGCCAATGTTCGCGTCATCGATTTGGTTATTC
GCCTGGGTGTCTGA

Upstream 100 bases:

>100_bases
CAGCCTGGAATTTAGTTCCTAGCTAGAACGGATATTGACTTAGTTCCAATTTGCCGTGAGTCTCTGCTATGGTTAGGGAC
TTGCGGTAAGGACCGAAAAA

Downstream 100 bases:

>100_bases
TCCGCGCGCCCCTGTCCGGTCAAGGACGGGGTGTCGTCGGCTTTAGAGCCCGAGGTGCGGCGGCCAATCCCGCCGGATCT
TTATCCGTTTCCGGGTTGGA

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNHHRPFRPILEKLRKAGLRPTRQRLALARLMFDAGNRHVTAETLHTEAMDAGVSVSLATVYNTLHQFTEGGLLREVVVD
PGRSYFDTNTSEHYHFYFEVSGELVDIPASDVNIDRLPEIPAGANVRVIDLVIRLGV

Sequences:

>Translated_137_residues
MNHHRPFRPILEKLRKAGLRPTRQRLALARLMFDAGNRHVTAETLHTEAMDAGVSVSLATVYNTLHQFTEGGLLREVVVD
PGRSYFDTNTSEHYHFYFEVSGELVDIPASDVNIDRLPEIPAGANVRVIDLVIRLGV
>Mature_137_residues
MNHHRPFRPILEKLRKAGLRPTRQRLALARLMFDAGNRHVTAETLHTEAMDAGVSVSLATVYNTLHQFTEGGLLREVVVD
PGRSYFDTNTSEHYHFYFEVSGELVDIPASDVNIDRLPEIPAGANVRVIDLVIRLGV

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI1786899, Length=119, Percent_Identity=33.6134453781513, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 15390; Mature: 15390

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHHRPFRPILEKLRKAGLRPTRQRLALARLMFDAGNRHVTAETLHTEAMDAGVSVSLAT
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEEHHHH
VYNTLHQFTEGGLLREVVVDPGRSYFDTNTSEHYHFYFEVSGELVDIPASDVNIDRLPEI
HHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCC
PAGANVRVIDLVIRLGV
CCCCCEEHHHEEHHHCC
>Mature Secondary Structure
MNHHRPFRPILEKLRKAGLRPTRQRLALARLMFDAGNRHVTAETLHTEAMDAGVSVSLAT
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEEHHHH
VYNTLHQFTEGGLLREVVVDPGRSYFDTNTSEHYHFYFEVSGELVDIPASDVNIDRLPEI
HHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCC
PAGANVRVIDLVIRLGV
CCCCCEEHHHEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA