| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yeaZ [H]
Identifier: 83595092
GI number: 83595092
Start: 4313859
End: 4314557
Strand: Direct
Name: yeaZ [H]
Synonym: Rru_A3763
Alternate gene names: 83595092
Gene position: 4313859-4314557 (Clockwise)
Preceding gene: 83595091
Following gene: 83595093
Centisome position: 99.1
GC content: 75.11
Gene sequence:
>699_bases GTGAGCCTGTCGGCCGCCAAGCCCGACGGCGGGCCGCCGACGGTTCTGGCCATCGACACCGCCCTGGCCGCCTGTTCGGT GGCGGTGGTGGCGGCGGACCGCCCGGCGGTGTCGCGCCACCAGCCGATGGCGCGTGGTCAGGCCGAGGTTTTGATGCCGA TGATCGCCGAGGTGATGGCGGCGGCCGGTCTGGGCTATGGCGATCTGGATCTGATCGCCGTGACCAGCGGTCCGGGGTCG TTCACCGGCCTGCGGGTCGGGCTGGCGACGGCGCGCGGACTGGCCCTGGCCTGCGGTCGTCCGGCGGCGGGGATCGCTGT GCCGATGGTTCTGGCCGATGCCGCCCTCGCCCAGGCGCCCGACCGTCCGGCCCTGGTGCTGCTCGACAACCGGCGGGGCG AGGTTCATGGCCAAAGCTTTCACGGGCGCGATGACCGGGGCTTGCCGCTGGCCGCCGGCCCGCTGCTGACCCTTGATCTC GACGCGGCGCGGGCCTTGCTTGGCGAAGGGCCGACGACCCTGGCCGGCGATGGCGCCGCCCTGCTGGGCTGCGCGGTCGC CCCCGGGTTGATCTTCGCCGATCCGCTGCGGCTGGCCGATCTGGCGGCGCGCGGCCTGGGCGAGCGTCCGCCACGGCCGC TTTACCTGCGCCCCCCCGATGCCATCGCCCCGCGCGATGGCGGCCGGCTGCGGCCATGA
Upstream 100 bases:
>100_bases ATGAATGGTGGCACTATCAGCTTTTCAACGCCCGCGCCCGCTATCCGGTGCTCAGCGACAACGCCGCCGGAACCCGGATG ATGGGCGACGGGGGCGGCCG
Downstream 100 bases:
>100_bases GCGCCGATCGCCCGCCGCCGGGCGTGATCGCCCGTGCCACGCCGCCCGCCATGATCGCCCTGGCGCCGGTTCATGGGGGA GTGCTGGCTACTCTCCATGC
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSLSAAKPDGGPPTVLAIDTALAACSVAVVAADRPAVSRHQPMARGQAEVLMPMIAEVMAAAGLGYGDLDLIAVTSGPGS FTGLRVGLATARGLALACGRPAAGIAVPMVLADAALAQAPDRPALVLLDNRRGEVHGQSFHGRDDRGLPLAAGPLLTLDL DAARALLGEGPTTLAGDGAALLGCAVAPGLIFADPLRLADLAARGLGERPPRPLYLRPPDAIAPRDGGRLRP
Sequences:
>Translated_232_residues MSLSAAKPDGGPPTVLAIDTALAACSVAVVAADRPAVSRHQPMARGQAEVLMPMIAEVMAAAGLGYGDLDLIAVTSGPGS FTGLRVGLATARGLALACGRPAAGIAVPMVLADAALAQAPDRPALVLLDNRRGEVHGQSFHGRDDRGLPLAAGPLLTLDL DAARALLGEGPTTLAGDGAALLGCAVAPGLIFADPLRLADLAARGLGERPPRPLYLRPPDAIAPRDGGRLRP >Mature_231_residues SLSAAKPDGGPPTVLAIDTALAACSVAVVAADRPAVSRHQPMARGQAEVLMPMIAEVMAAAGLGYGDLDLIAVTSGPGSF TGLRVGLATARGLALACGRPAAGIAVPMVLADAALAQAPDRPALVLLDNRRGEVHGQSFHGRDDRGLPLAAGPLLTLDLD AARALLGEGPTTLAGDGAALLGCAVAPGLIFADPLRLADLAARGLGERPPRPLYLRPPDAIAPRDGGRLRP
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=135, Percent_Identity=34.8148148148148, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 23321; Mature: 23190
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSAAKPDGGPPTVLAIDTALAACSVAVVAADRPAVSRHQPMARGQAEVLMPMIAEVMA CCCCCCCCCCCCCEEEEEHHHHHHHHEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHH AAGLGYGDLDLIAVTSGPGSFTGLRVGLATARGLALACGRPAAGIAVPMVLADAALAQAP HHCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCC DRPALVLLDNRRGEVHGQSFHGRDDRGLPLAAGPLLTLDLDAARALLGEGPTTLAGDGAA CCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEHHHHHHHHCCCCCEECCCCHH LLGCAVAPGLIFADPLRLADLAARGLGERPPRPLYLRPPDAIAPRDGGRLRP HHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SLSAAKPDGGPPTVLAIDTALAACSVAVVAADRPAVSRHQPMARGQAEVLMPMIAEVMA CCCCCCCCCCCCEEEEEHHHHHHHHEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHH AAGLGYGDLDLIAVTSGPGSFTGLRVGLATARGLALACGRPAAGIAVPMVLADAALAQAP HHCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCC DRPALVLLDNRRGEVHGQSFHGRDDRGLPLAAGPLLTLDLDAARALLGEGPTTLAGDGAA CCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEHHHHHHHHCCCCCEECCCCHH LLGCAVAPGLIFADPLRLADLAARGLGERPPRPLYLRPPDAIAPRDGGRLRP HHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]