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The map label for this gene is ddpX [H]

Identifier: 83595091

GI number: 83595091

Start: 4313290

End: 4313862

Strand: Direct

Name: ddpX [H]

Synonym: Rru_A3762

Alternate gene names: 83595091

Gene position: 4313290-4313862 (Clockwise)

Preceding gene: 83595090

Following gene: 83595092

Centisome position: 99.09

GC content: 64.92

Gene sequence:

>573_bases
ATGTTGACCGAAATCACCGCCGAAGCCTTTGGGGTCGAGGTGGATATCGTCTATGCCACCGATCGCAATTTCACCGGCAA
GCCGGTTTATGCGCGGGGCGCTTGTTACCTCAATCCCGAAGCCGCCGATCTGTTGGCGCGCGCCGTTGATCTGGCCGACC
GCCTGGGCTATCGCCTGCGCATCCTTGACGCCTTCCGCCCGGCCGAGGCGCAATGGGTGCTGTGGCGCAGCGTGCCCGAC
GCCACCTTCATCGCCGATCCCAATCGCGGATCGCCCCATAGCATGGGGGCCGCCGTCGATCTGACCCTAGTCGACAAGGC
GAGCGGCGCCGTGCTCGACATGGGAACCGGCTTTGATGACATGCGGCCGCTGTCGTTCCACGGCGAGACCGGGATTTCCC
TTGAAGCCCAGCGCAACCGCATCGTTCTGCTGGGCCTGATGACGGCGGCGGGCTGGGATTACTACCGCAATGAATGGTGG
CACTATCAGCTTTTCAACGCCCGCGCCCGCTATCCGGTGCTCAGCGACAACGCCGCCGGAACCCGGATGATGGGCGACGG
GGGCGGCCGGTGA

Upstream 100 bases:

>100_bases
GACAGCGGCGGGAAGCCATGCGATCCCCCCGCCCGGGGAAACGTCGTCATCGGCCCGAAGGCAAGGGGACCCCGGGCATT
GTGGAGCCAAAGTTCCGATC

Downstream 100 bases:

>100_bases
GCCTGTCGGCCGCCAAGCCCGACGGCGGGCCGCCGACGGTTCTGGCCATCGACACCGCCCTGGCCGCCTGTTCGGTGGCG
GTGGTGGCGGCGGACCGCCC

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLTEITAEAFGVEVDIVYATDRNFTGKPVYARGACYLNPEAADLLARAVDLADRLGYRLRILDAFRPAEAQWVLWRSVPD
ATFIADPNRGSPHSMGAAVDLTLVDKASGAVLDMGTGFDDMRPLSFHGETGISLEAQRNRIVLLGLMTAAGWDYYRNEWW
HYQLFNARARYPVLSDNAAGTRMMGDGGGR

Sequences:

>Translated_190_residues
MLTEITAEAFGVEVDIVYATDRNFTGKPVYARGACYLNPEAADLLARAVDLADRLGYRLRILDAFRPAEAQWVLWRSVPD
ATFIADPNRGSPHSMGAAVDLTLVDKASGAVLDMGTGFDDMRPLSFHGETGISLEAQRNRIVLLGLMTAAGWDYYRNEWW
HYQLFNARARYPVLSDNAAGTRMMGDGGGR
>Mature_190_residues
MLTEITAEAFGVEVDIVYATDRNFTGKPVYARGACYLNPEAADLLARAVDLADRLGYRLRILDAFRPAEAQWVLWRSVPD
ATFIADPNRGSPHSMGAAVDLTLVDKASGAVLDMGTGFDDMRPLSFHGETGISLEAQRNRIVLLGLMTAAGWDYYRNEWW
HYQLFNARARYPVLSDNAAGTRMMGDGGGR

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=166, Percent_Identity=41.566265060241, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 20978; Mature: 20978

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEITAEAFGVEVDIVYATDRNFTGKPVYARGACYLNPEAADLLARAVDLADRLGYRLR
CCCEECHHHHCEEEEEEEEECCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHCCCEEE
ILDAFRPAEAQWVLWRSVPDATFIADPNRGSPHSMGAAVDLTLVDKASGAVLDMGTGFDD
EEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCC
MRPLSFHGETGISLEAQRNRIVLLGLMTAAGWDYYRNEWWHYQLFNARARYPVLSDNAAG
CCCEEECCCCCEEEEECCCEEEEEEEECCCCCHHHHCCEEEEEEECCCCCCCEEECCCCC
TRMMGDGGGR
CEEECCCCCC
>Mature Secondary Structure
MLTEITAEAFGVEVDIVYATDRNFTGKPVYARGACYLNPEAADLLARAVDLADRLGYRLR
CCCEECHHHHCEEEEEEEEECCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHCCCEEE
ILDAFRPAEAQWVLWRSVPDATFIADPNRGSPHSMGAAVDLTLVDKASGAVLDMGTGFDD
EEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCC
MRPLSFHGETGISLEAQRNRIVLLGLMTAAGWDYYRNEWWHYQLFNARARYPVLSDNAAG
CCCEEECCCCCEEEEECCCEEEEEEEECCCCCHHHHCCEEEEEEECCCCCCCEEECCCCC
TRMMGDGGGR
CEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]