| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595013
Identifier: 83595013
GI number: 83595013
Start: 4231018
End: 4232646
Strand: Reverse
Name: 83595013
Synonym: Rru_A3684
Alternate gene names: NA
Gene position: 4232646-4231018 (Counterclockwise)
Preceding gene: 83595014
Following gene: 83595009
Centisome position: 97.24
GC content: 72.19
Gene sequence:
>1629_bases ATGCAGGGCCATCACGCGGCGGCGCGCGCCTTGCGCCGTCAGGGGCGCCTAGGCGAGGCGATCGCCCGCTATCGCGCGGC CCTGGCCGCCACCCCGGGCGCGGCCGTTCTCCAAGCCGAAATGGCCGAATGCCTGTTCGCCGCCGGTCAGGCCGAAGCGG CGGTGAAGGCGCTGGGTCAGGCGGTCCGGCTCGACCCCGATAACGCCACCCACCGCGGCAATCTGGCGATGCTGCTGGCC CGCAAGGGCGATCTGGCCGGCGCCATTGATCATGCCCGGGCGGCGGTGCGCCTCGCCCCCAAGGACGGCGCCTTGCGCCT GCGTCTGGCCCGTCTGCTGATCGCGGCCGGCCATCCCCGCGAGGCCGAGGCCGAGGCCCTGGACGCCACCCGCCGTCTGC CGCGCGAGGCCGCCAGTTGGATTGCCCTGGCCGGAGCCCGGCTGCTTGACCAGCGCCCCAATGACGCCGAAGCGCCCAGC GCCCGCGCCCTAGCCCTGGCCCCCAATGACGCCGAGGCGCTCAGCCTGCGCACCGATCTGCTGCTCAGCCTCGGCCGTCT GGCCGAGGCCGAGGCGACGGCCCGCCTTGCCTTGAAGCGGCAACCCACGTCGCTGGCCGCCCTGGTCGCGCTGTCGAAAG CCAAGACCTTCCGCCCCGACGACCCGGACTGGCCGGCCCTGGCGGCCCTGCTGCCCAGCCTGGGCGAGAGGAGCGCCGAA GAGGCGGTAAAGCTGCATTTCGCCAGCGCCAAGGCGCTGGAGGACATGGGCCGCGACGACGAGGCCTTCGCCCATTATCA GGCGGGCAACAGCCTGAAGGGCAGGGGCCTGCCCGATGAACTGCCGGCGCTGAGCGCCATGGTCGACAGCCTGGAACGCT GGACGCCCAAGCTGCGGCCGGTCGGCGAGGGCGATCCTTTGCCGGTGTTCATCGTCGGCATGCCGCGCTCGGGCACCACG CTGGTCGAACAGATCCTTGACCGCCACCGGGCGATCCATGGCGCCGGCGAGATCTTGCTGTTTGGCGAAAGGGTGGTCGC CAACGGCCTGGGCGGCTATAGCGCCGATCCGCAAGGCCTTGATCCCGAGCGGCTAGCGGCTTTGGGGGCGGATTATCGCG ACCGCCTGCGCGGCCTCGCCCCCCGGGCCGGGCGCATCATCAACAAGACCCCGGGTAACTGGCTGCATCTGGGGCTGATC GCCGCCGCCCTGCCCGGCGCCAGGATCATCTGGTGCCGGCGCGATCCCGTCGATTGCTGCCTGTCGTGCTTTCGCAATCT GTTCGGCCAGGGCCACGCCTGGACCACCGATCTGGGGCGGGCCGGGCGCTACTATCGCCTTCAAGAGCGGCTGACCGGCC ACTGGCAGGCCGTGCTGGGCGATGAGCGCATGACCGCCGTTGATTACGAGGCCCTGGTCGCCGACCCGGAGGCCGAGGCC CGCCGGCTGGTCGCCCACCTTGGCCTGGAGTGGGACGAGGCCTGCCTTGACCATACCCGGGGCGGGCGGGCGGTCACCAC CTTGTCCCAGGTCCAGGTCCGCCAGCCGATCACCGACGCCTCCGTCGGTCGCGGCCGGCGGTTCCAGACCCACCTCGGGC CGCTTCTCACCGCCCTGGACGGGCGCTGA
Upstream 100 bases:
>100_bases GCCTTCAGCCTGCGCACCGTCTCGCGGCGCGCCGGCTTTCCCCTGGGGGATTAACCCATGCTATAGACGGGGGCGAAATT GGCGGAAAAAGGACCCATCC
Downstream 100 bases:
>100_bases GAACCCCTCAGCGCGTGGCTTCGATGTGGAAGGCGATGGTCACCTTGCGCCCGACGGCGCCGTCGCCGGCCCATTCGCCG GTGCCGACGCTGAAATCGGT
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MQGHHAAARALRRQGRLGEAIARYRAALAATPGAAVLQAEMAECLFAAGQAEAAVKALGQAVRLDPDNATHRGNLAMLLA RKGDLAGAIDHARAAVRLAPKDGALRLRLARLLIAAGHPREAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPS ARALALAPNDAEALSLRTDLLLSLGRLAEAEATARLALKRQPTSLAALVALSKAKTFRPDDPDWPALAALLPSLGERSAE EAVKLHFASAKALEDMGRDDEAFAHYQAGNSLKGRGLPDELPALSAMVDSLERWTPKLRPVGEGDPLPVFIVGMPRSGTT LVEQILDRHRAIHGAGEILLFGERVVANGLGGYSADPQGLDPERLAALGADYRDRLRGLAPRAGRIINKTPGNWLHLGLI AAALPGARIIWCRRDPVDCCLSCFRNLFGQGHAWTTDLGRAGRYYRLQERLTGHWQAVLGDERMTAVDYEALVADPEAEA RRLVAHLGLEWDEACLDHTRGGRAVTTLSQVQVRQPITDASVGRGRRFQTHLGPLLTALDGR
Sequences:
>Translated_542_residues MQGHHAAARALRRQGRLGEAIARYRAALAATPGAAVLQAEMAECLFAAGQAEAAVKALGQAVRLDPDNATHRGNLAMLLA RKGDLAGAIDHARAAVRLAPKDGALRLRLARLLIAAGHPREAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPS ARALALAPNDAEALSLRTDLLLSLGRLAEAEATARLALKRQPTSLAALVALSKAKTFRPDDPDWPALAALLPSLGERSAE EAVKLHFASAKALEDMGRDDEAFAHYQAGNSLKGRGLPDELPALSAMVDSLERWTPKLRPVGEGDPLPVFIVGMPRSGTT LVEQILDRHRAIHGAGEILLFGERVVANGLGGYSADPQGLDPERLAALGADYRDRLRGLAPRAGRIINKTPGNWLHLGLI AAALPGARIIWCRRDPVDCCLSCFRNLFGQGHAWTTDLGRAGRYYRLQERLTGHWQAVLGDERMTAVDYEALVADPEAEA RRLVAHLGLEWDEACLDHTRGGRAVTTLSQVQVRQPITDASVGRGRRFQTHLGPLLTALDGR >Mature_542_residues MQGHHAAARALRRQGRLGEAIARYRAALAATPGAAVLQAEMAECLFAAGQAEAAVKALGQAVRLDPDNATHRGNLAMLLA RKGDLAGAIDHARAAVRLAPKDGALRLRLARLLIAAGHPREAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPS ARALALAPNDAEALSLRTDLLLSLGRLAEAEATARLALKRQPTSLAALVALSKAKTFRPDDPDWPALAALLPSLGERSAE EAVKLHFASAKALEDMGRDDEAFAHYQAGNSLKGRGLPDELPALSAMVDSLERWTPKLRPVGEGDPLPVFIVGMPRSGTT LVEQILDRHRAIHGAGEILLFGERVVANGLGGYSADPQGLDPERLAALGADYRDRLRGLAPRAGRIINKTPGNWLHLGLI AAALPGARIIWCRRDPVDCCLSCFRNLFGQGHAWTTDLGRAGRYYRLQERLTGHWQAVLGDERMTAVDYEALVADPEAEA RRLVAHLGLEWDEACLDHTRGGRAVTTLSQVQVRQPITDASVGRGRRFQTHLGPLLTALDGR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 58215; Mature: 58215
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGHHAAARALRRQGRLGEAIARYRAALAATPGAAVLQAEMAECLFAAGQAEAAVKALGQ CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH AVRLDPDNATHRGNLAMLLARKGDLAGAIDHARAAVRLAPKDGALRLRLARLLIAAGHPR HEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCC EAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPSARALALAPNDAEALSLRTDL CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHH LLSLGRLAEAEATARLALKRQPTSLAALVALSKAKTFRPDDPDWPALAALLPSLGERSAE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHH EAVKLHFASAKALEDMGRDDEAFAHYQAGNSLKGRGLPDELPALSAMVDSLERWTPKLRP HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC VGEGDPLPVFIVGMPRSGTTLVEQILDRHRAIHGAGEILLFGERVVANGLGGYSADPQGL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCCCC DPERLAALGADYRDRLRGLAPRAGRIINKTPGNWLHLGLIAAALPGARIIWCRRDPVDCC CHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEEECCCCHHHH LSCFRNLFGQGHAWTTDLGRAGRYYRLQERLTGHWQAVLGDERMTAVDYEALVADPEAEA HHHHHHHCCCCCCEECHHHCCCCHHHHHHHHCHHHHHHHCCCCCEEECHHHHHCCCHHHH RRLVAHLGLEWDEACLDHTRGGRAVTTLSQVQVRQPITDASVGRGRRFQTHLGPLLTALD HHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC GR CC >Mature Secondary Structure MQGHHAAARALRRQGRLGEAIARYRAALAATPGAAVLQAEMAECLFAAGQAEAAVKALGQ CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH AVRLDPDNATHRGNLAMLLARKGDLAGAIDHARAAVRLAPKDGALRLRLARLLIAAGHPR HEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCC EAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPSARALALAPNDAEALSLRTDL CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHH LLSLGRLAEAEATARLALKRQPTSLAALVALSKAKTFRPDDPDWPALAALLPSLGERSAE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHH EAVKLHFASAKALEDMGRDDEAFAHYQAGNSLKGRGLPDELPALSAMVDSLERWTPKLRP HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC VGEGDPLPVFIVGMPRSGTTLVEQILDRHRAIHGAGEILLFGERVVANGLGGYSADPQGL CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCCCC DPERLAALGADYRDRLRGLAPRAGRIINKTPGNWLHLGLIAAALPGARIIWCRRDPVDCC CHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEEECCCCHHHH LSCFRNLFGQGHAWTTDLGRAGRYYRLQERLTGHWQAVLGDERMTAVDYEALVADPEAEA HHHHHHHCCCCCCEECHHHCCCCHHHHHHHHCHHHHHHHCCCCCEEECHHHHHCCCHHHH RRLVAHLGLEWDEACLDHTRGGRAVTTLSQVQVRQPITDASVGRGRRFQTHLGPLLTALD HHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]