| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594965
Identifier: 83594965
GI number: 83594965
Start: 4176516
End: 4177910
Strand: Reverse
Name: 83594965
Synonym: Rru_A3636
Alternate gene names: NA
Gene position: 4177910-4176516 (Counterclockwise)
Preceding gene: 83594966
Following gene: 83594964
Centisome position: 95.98
GC content: 70.11
Gene sequence:
>1395_bases ATGGCCGTCGACGCGACAGTTTCCGCCGCACCGACTCCGGCAAAGGACCAAGCGACCCCCGGCTATCGGATCGAGGGCGA CAAGGTCATCAACGACGGTTTCCTGGACGGCTTCACGTTCTGGGACGCCCTTGATGTGGTCAACCCCTTGCAGCACATTC CCATCGTTGGCCCGATCTACCGGGAACTCACCGGCGATGAACTGAAAGCGGGCCCCCGGTTGGCCGGCGGAACGCTGTTT GGCGGGGTGCTGGGTCTGGTCGATGCCGCCGTCAACGTCGCCGTTCAAAAGATGACCGGCAAGGACATCGGCGGCCATGT GATCGCCTTGGCCAAATCGGCCGCCGGCTATGACGAGGAGCCGGTGCTGACCGCCAAGGTCGCCGCGCCGAGCGGTACCG CCGCCGCGCTTGATCCCCATGCCCCGATCAGTTTGCTGCCGCCCAAATGGCAGGCCACGGCCAGCGCCGCGTCGACCGCC GGCGCGGGCACTGGTGCGGGCGGGCCGGCGGACAAGACCATGCCCCTTGGCTATGACGCCCTGACCCCGGCCGGGGCGGC GAGCGGCGCCACCGGCGCCGGGTCGGGCAAGGCCAAACCGGGCAAGGTCGATCTGATCCTGCCCCAGCAGAAGGCCGACC GGACCAGCGGCAGCGAACCCCAGGGCCTGCCCCTGGGCTATGACGCCCTGGCGGCGACCGGGGCCAAGACCAGCGCCGTC CCCTCGGCCCAGGTGGCGAAGCTGCAGGCCCAGACCGGCGACGCCAAGGCCGCCCTGGCCCGCACCATCGCCGCCCAGGA AGGCGGCCAATTGGGCACCATCGGCCAGCAGGGGGGCCAGCAGGGAAGCCAGCAAAGCGCCTCCGCCCGCCGGCCCGGCC CCACCAGCCTTACCCAGCAAGAAGGCCCGCAACGCACCTTCTCGGGCAAGACCCTGGCCCAGTATCAGGCCCAGGCCCCG GGCGTGGTGACGGCGCGCATGCCGACCACGCTGACCGGTTCGCGCGTTGGCTCGGCGCAGACCGTGGCCCCCGGCCGCTC GCCGCGCGAGTTGACCGATCCGGCGACCATGGCCGGCCTGCTTACCATGCAGGCCGAGGCCAACCGCCTGCCCAAAACCT CGAACGGCCAGTCCCAAGGTGGGGACAGCGGGGCGACCGATGTGGGCGATACCCTGAGCATTCCCGAAAAAGGCCGACCG ACGGCTTCGGCGACGCCGCCAAACGGCTTGACGACCTCCCCCGGCGTGGCGTCTTCTGCCGCCGCGGCCCCGGCCGCAGC CGTTACTGGGGATCAAACCAGCCCCTGGTTCAACCAGCAGATGATGCGCGGGCTGGAAAAGTACCAGAAATCCCGGGGTG GCCTTCCGACCAGCGGCACCGACATCAACGCCTGA
Upstream 100 bases:
>100_bases AAGGCCGATCGGGGAGCAAATTGGTGATGGCACAAAGTTTGCTTTGATATGGGTGACTTAGAGGGTCCCTCGGGACCGCC CCCGCTTCAAGGAACCGACC
Downstream 100 bases:
>100_bases TAAGCCTTTTGGCGGAGGTTAAGCGATGGCTGCGCTGCTGCGCGTGGGTCCCGACGCCCTGTTGCGGGTGAACGATCTGG TTTTCCCCTGCCGCCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MAVDATVSAAPTPAKDQATPGYRIEGDKVINDGFLDGFTFWDALDVVNPLQHIPIVGPIYRELTGDELKAGPRLAGGTLF GGVLGLVDAAVNVAVQKMTGKDIGGHVIALAKSAAGYDEEPVLTAKVAAPSGTAAALDPHAPISLLPPKWQATASAASTA GAGTGAGGPADKTMPLGYDALTPAGAASGATGAGSGKAKPGKVDLILPQQKADRTSGSEPQGLPLGYDALAATGAKTSAV PSAQVAKLQAQTGDAKAALARTIAAQEGGQLGTIGQQGGQQGSQQSASARRPGPTSLTQQEGPQRTFSGKTLAQYQAQAP GVVTARMPTTLTGSRVGSAQTVAPGRSPRELTDPATMAGLLTMQAEANRLPKTSNGQSQGGDSGATDVGDTLSIPEKGRP TASATPPNGLTTSPGVASSAAAAPAAAVTGDQTSPWFNQQMMRGLEKYQKSRGGLPTSGTDINA
Sequences:
>Translated_464_residues MAVDATVSAAPTPAKDQATPGYRIEGDKVINDGFLDGFTFWDALDVVNPLQHIPIVGPIYRELTGDELKAGPRLAGGTLF GGVLGLVDAAVNVAVQKMTGKDIGGHVIALAKSAAGYDEEPVLTAKVAAPSGTAAALDPHAPISLLPPKWQATASAASTA GAGTGAGGPADKTMPLGYDALTPAGAASGATGAGSGKAKPGKVDLILPQQKADRTSGSEPQGLPLGYDALAATGAKTSAV PSAQVAKLQAQTGDAKAALARTIAAQEGGQLGTIGQQGGQQGSQQSASARRPGPTSLTQQEGPQRTFSGKTLAQYQAQAP GVVTARMPTTLTGSRVGSAQTVAPGRSPRELTDPATMAGLLTMQAEANRLPKTSNGQSQGGDSGATDVGDTLSIPEKGRP TASATPPNGLTTSPGVASSAAAAPAAAVTGDQTSPWFNQQMMRGLEKYQKSRGGLPTSGTDINA >Mature_463_residues AVDATVSAAPTPAKDQATPGYRIEGDKVINDGFLDGFTFWDALDVVNPLQHIPIVGPIYRELTGDELKAGPRLAGGTLFG GVLGLVDAAVNVAVQKMTGKDIGGHVIALAKSAAGYDEEPVLTAKVAAPSGTAAALDPHAPISLLPPKWQATASAASTAG AGTGAGGPADKTMPLGYDALTPAGAASGATGAGSGKAKPGKVDLILPQQKADRTSGSEPQGLPLGYDALAATGAKTSAVP SAQVAKLQAQTGDAKAALARTIAAQEGGQLGTIGQQGGQQGSQQSASARRPGPTSLTQQEGPQRTFSGKTLAQYQAQAPG VVTARMPTTLTGSRVGSAQTVAPGRSPRELTDPATMAGLLTMQAEANRLPKTSNGQSQGGDSGATDVGDTLSIPEKGRPT ASATPPNGLTTSPGVASSAAAAPAAAVTGDQTSPWFNQQMMRGLEKYQKSRGGLPTSGTDINA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46238; Mature: 46107
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDATVSAAPTPAKDQATPGYRIEGDKVINDGFLDGFTFWDALDVVNPLQHIPIVGPIY CCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHH RELTGDELKAGPRLAGGTLFGGVLGLVDAAVNVAVQKMTGKDIGGHVIALAKSAAGYDEE HHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCC PVLTAKVAAPSGTAAALDPHAPISLLPPKWQATASAASTAGAGTGAGGPADKTMPLGYDA CEEEEEEECCCCCCEEECCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC LTPAGAASGATGAGSGKAKPGKVDLILPQQKADRTSGSEPQGLPLGYDALAATGAKTSAV CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC PSAQVAKLQAQTGDAKAALARTIAAQEGGQLGTIGQQGGQQGSQQSASARRPGPTSLTQQ CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEECCHHHCCCCCCHHHHCCCCCCCCCCCCC EGPQRTFSGKTLAQYQAQAPGVVTARMPTTLTGSRVGSAQTVAPGRSPRELTDPATMAGL CCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEECCCCCCHHHCCHHHHHHH LTMQAEANRLPKTSNGQSQGGDSGATDVGDTLSIPEKGRPTASATPPNGLTTSPGVASSA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AAAPAAAVTGDQTSPWFNQQMMRGLEKYQKSRGGLPTSGTDINA HCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AVDATVSAAPTPAKDQATPGYRIEGDKVINDGFLDGFTFWDALDVVNPLQHIPIVGPIY CCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHH RELTGDELKAGPRLAGGTLFGGVLGLVDAAVNVAVQKMTGKDIGGHVIALAKSAAGYDEE HHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCC PVLTAKVAAPSGTAAALDPHAPISLLPPKWQATASAASTAGAGTGAGGPADKTMPLGYDA CEEEEEEECCCCCCEEECCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC LTPAGAASGATGAGSGKAKPGKVDLILPQQKADRTSGSEPQGLPLGYDALAATGAKTSAV CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC PSAQVAKLQAQTGDAKAALARTIAAQEGGQLGTIGQQGGQQGSQQSASARRPGPTSLTQQ CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEECCHHHCCCCCCHHHHCCCCCCCCCCCCC EGPQRTFSGKTLAQYQAQAPGVVTARMPTTLTGSRVGSAQTVAPGRSPRELTDPATMAGL CCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEECCCCCCHHHCCHHHHHHH LTMQAEANRLPKTSNGQSQGGDSGATDVGDTLSIPEKGRPTASATPPNGLTTSPGVASSA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AAAPAAAVTGDQTSPWFNQQMMRGLEKYQKSRGGLPTSGTDINA HCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA