| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hisE
Identifier: 83594922
GI number: 83594922
Start: 4135990
End: 4136343
Strand: Reverse
Name: hisE
Synonym: Rru_A3593
Alternate gene names: 83594922
Gene position: 4136343-4135990 (Counterclockwise)
Preceding gene: 83594923
Following gene: 83594921
Centisome position: 95.03
GC content: 68.36
Gene sequence:
>354_bases ATGACCGATATCCCCCCCGCCGTCTCCCCCCCGCCCGGTCCCGAGATCATCGATGCCCTGGCGGCGGTGATCGCCAGCCG CCAGGGGGCCGATCCCGCCACCTCCTATACCGCCAAGCTGTTTGGCCGGGGCCGGGGCAAGATCGTGCAGAAATTCGGCG AGGAGGCCTTCGAGGTCGGCGTCGCCGCCCTGGTGGAAAGCCCCGAGCAGGTGGTCGCCGAAAGCGCCGATGTGCTTTAT CACCTGATGGTGCTGTGGGCCGATGTCGGGGTGACCCCCGATCGGGTCTGGGCCGAATTGGCCCGCCGCTTCGGCACCTC GGGCATCGACGAGAAAGCCGCCCGCAAGAAGTGA
Upstream 100 bases:
>100_bases GCGGCCGGACTCCCCATGCGGCTTTAGGGCGGCACGCGGAACAGCGGCTTCGCCCGTCGCCGCCATAACGCCGGCTCCCC ATTCAAACGGAAGATCGCCG
Downstream 100 bases:
>100_bases CCCTGTCTTTCCGGAGCAGTCCCCATGGCCTATGACGACAGCAATATCTTCGCCCGCATCCTGCGCGGGGAAATCCCCTG CGATAAGGTTTTCGAAGACG
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTDIPPAVSPPPGPEIIDALAAVIASRQGADPATSYTAKLFGRGRGKIVQKFGEEAFEVGVAALVESPEQVVAESADVLY HLMVLWADVGVTPDRVWAELARRFGTSGIDEKAARKK
Sequences:
>Translated_117_residues MTDIPPAVSPPPGPEIIDALAAVIASRQGADPATSYTAKLFGRGRGKIVQKFGEEAFEVGVAALVESPEQVVAESADVLY HLMVLWADVGVTPDRVWAELARRFGTSGIDEKAARKK >Mature_116_residues TDIPPAVSPPPGPEIIDALAAVIASRQGADPATSYTAKLFGRGRGKIVQKFGEEAFEVGVAALVESPEQVVAESADVLYH LMVLWADVGVTPDRVWAELARRFGTSGIDEKAARKK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=84, Percent_Identity=42.8571428571429, Blast_Score=74, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_RHORT (Q2RNA8)
Other databases:
- EMBL: CP000230 - RefSeq: YP_428674.1 - ProteinModelPortal: Q2RNA8 - SMR: Q2RNA8 - STRING: Q2RNA8 - GeneID: 3837049 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A3593 - NMPDR: fig|1085.1.peg.1904 - eggNOG: COG0140 - HOGENOM: HBG646527 - OMA: WADADLE - ProtClustDB: PRK00400 - BioCyc: RRUB269796:RRU_A3593-MONOMER - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 12431; Mature: 12300
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIPPAVSPPPGPEIIDALAAVIASRQGADPATSYTAKLFGRGRGKIVQKFGEEAFEVG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH VAALVESPEQVVAESADVLYHLMVLWADVGVTPDRVWAELARRFGTSGIDEKAARKK HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCC >Mature Secondary Structure TDIPPAVSPPPGPEIIDALAAVIASRQGADPATSYTAKLFGRGRGKIVQKFGEEAFEVG CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH VAALVESPEQVVAESADVLYHLMVLWADVGVTPDRVWAELARRFGTSGIDEKAARKK HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA