Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is pssA [H]

Identifier: 83594913

GI number: 83594913

Start: 4127543

End: 4128370

Strand: Reverse

Name: pssA [H]

Synonym: Rru_A3584

Alternate gene names: 83594913

Gene position: 4128370-4127543 (Counterclockwise)

Preceding gene: 83594914

Following gene: 83594910

Centisome position: 94.84

GC content: 64.13

Gene sequence:

>828_bases
ATGGTCCGCCACCCCCACGTCCTGCGCCGGAGCACCCCGCGATTTCAGGGGATGCCGTTCAACAAGATGGTCCCCAATAT
GCTGACCTTGCTGGCGCTTTGCGCCGGCTTGACGTCCATTCGCTATGGGCTGCATGGGGAATACCAGAAGGCGGTGGTCG
CCCTGGTGTTTTCGGCCATCTTCGACGGCCTGGACGGGCGGGTGGCGCGCTTGCTCAAGGGCACCAGCCAGTTCGGCGCC
GAACTCGACAGCCTGTCGGATTTCGTCTGCTTCGGCGTCGCCCCGGCGATGCTTTTGTATTTATGGACGATGAGCGGCGC
CGGTGGCATCGGCTGGGCCCTGGTCTTGCTCTATGTCGTGTGCTGCGGCCTGCGGCTGGCCCGGTTCAATACCCAGTTGA
TGGGCGAAAAGGACCTGCCGTCCTGGGCCTATAACTATTTCACCGGGGTGCCCGCCCCGGCGGCGGCCGGTCTGGTGTTG
TTGCCGATGATCTTGTCGTTTGAAAGCGGCGCCGATTTCCTGGTCAGCCCGGTGGTTGCCGGGGTGTTCCTGGTTGGTGT
GGCGGCGCTGATGGTCAGCAAGCTGCCGACCTTCAGCTTCAAGAAAGCCAAGATCCCCCACGTCTATGTGCTGCCGCTGA
TGCTGGCCATCGGCGTTTTGGCCGCCTTTCTGGTGACCAATCCCTGGCTGACGCTGGGCGGCCTTGGCCTGTTCTATCTG
GCCCTGCTGCCCTTCGGCCTGCGCTCGTTCCGCAAGCTTCAGCGCGAGGCCCAGCAGGTGACGGGCGAAATCGCCGAGGA
AACGGTCGGCGCTCCGCCCGAGCCCTGA

Upstream 100 bases:

>100_bases
CCGCGCCGCTGGTCGCCCCCGGGCAAAGCTGTATTTCCGGGGAAACCGTCCTAGCCGATCTGGCTTCGGCCGAACCCGAA
CGTTTGGGAGTTCTGCGCTG

Downstream 100 bases:

>100_bases
GTGAAATAACGGGCCGCTTACGGTCGGCCGCGTCGCGGCGGACCATCGAAGGTCTCGCGCGAGCGCCGCGCGAAGCTTTC
CAGGCGGCGGGCGACCCGGC

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MVRHPHVLRRSTPRFQGMPFNKMVPNMLTLLALCAGLTSIRYGLHGEYQKAVVALVFSAIFDGLDGRVARLLKGTSQFGA
ELDSLSDFVCFGVAPAMLLYLWTMSGAGGIGWALVLLYVVCCGLRLARFNTQLMGEKDLPSWAYNYFTGVPAPAAAGLVL
LPMILSFESGADFLVSPVVAGVFLVGVAALMVSKLPTFSFKKAKIPHVYVLPLMLAIGVLAAFLVTNPWLTLGGLGLFYL
ALLPFGLRSFRKLQREAQQVTGEIAEETVGAPPEP

Sequences:

>Translated_275_residues
MVRHPHVLRRSTPRFQGMPFNKMVPNMLTLLALCAGLTSIRYGLHGEYQKAVVALVFSAIFDGLDGRVARLLKGTSQFGA
ELDSLSDFVCFGVAPAMLLYLWTMSGAGGIGWALVLLYVVCCGLRLARFNTQLMGEKDLPSWAYNYFTGVPAPAAAGLVL
LPMILSFESGADFLVSPVVAGVFLVGVAALMVSKLPTFSFKKAKIPHVYVLPLMLAIGVLAAFLVTNPWLTLGGLGLFYL
ALLPFGLRSFRKLQREAQQVTGEIAEETVGAPPEP
>Mature_275_residues
MVRHPHVLRRSTPRFQGMPFNKMVPNMLTLLALCAGLTSIRYGLHGEYQKAVVALVFSAIFDGLDGRVARLLKGTSQFGA
ELDSLSDFVCFGVAPAMLLYLWTMSGAGGIGWALVLLYVVCCGLRLARFNTQLMGEKDLPSWAYNYFTGVPAPAAAGLVL
LPMILSFESGADFLVSPVVAGVFLVGVAALMVSKLPTFSFKKAKIPHVYVLPLMLAIGVLAAFLVTNPWLTLGGLGLFYL
ALLPFGLRSFRKLQREAQQVTGEIAEETVGAPPEP

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=149, Percent_Identity=38.255033557047, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 29682; Mature: 29682

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRHPHVLRRSTPRFQGMPFNKMVPNMLTLLALCAGLTSIRYGLHGEYQKAVVALVFSAI
CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDGLDGRVARLLKGTSQFGAELDSLSDFVCFGVAPAMLLYLWTMSGAGGIGWALVLLYVV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CCGLRLARFNTQLMGEKDLPSWAYNYFTGVPAPAAAGLVLLPMILSFESGADFLVSPVVA
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GVFLVGVAALMVSKLPTFSFKKAKIPHVYVLPLMLAIGVLAAFLVTNPWLTLGGLGLFYL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ALLPFGLRSFRKLQREAQQVTGEIAEETVGAPPEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]