| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594906
Identifier: 83594906
GI number: 83594906
Start: 4121611
End: 4122465
Strand: Reverse
Name: 83594906
Synonym: Rru_A3577
Alternate gene names: NA
Gene position: 4122465-4121611 (Counterclockwise)
Preceding gene: 83594907
Following gene: 83594897
Centisome position: 94.71
GC content: 69.94
Gene sequence:
>855_bases ATGGATCCCTTGGTTTTCGCCCTGGTTCTGGGCGCCGCGGCGATGCACGCGGGCTGGAATGCCGTGGTCAAGGTCGGGCT GGACGGTTTCAGCGCCGTGATGCTGATTTCGATGGCGGCGGGGGTTCTGTCGCTGCTCGGCCTGCCCTTCGTGCCCTTTC CCGAGCCGGCGAGCTGGCCGTTCCTGGCGCTTTCGGGCTGTTTGCACATGGGCTATAACGTGGCCTTGATCGGCGCCTAT CGCGCCGGCGATTTCGGCCAGATCTATCCGATCGCCCGGGGGGCCGCGCCCTTGATGGTCGCCGTGCTCTCGGCCCTGCT GCTTGACGAGCCGCCCGGGCTGGTCGCCGCCCTTGGCATCGCCCTGCTGGTTGGCGGCGTCTGGCTGATGTCGATCCGCG GCGGGGCGGTCGGCCGAAGCGGCGGTCTGCCCGAACGCCGCGCCCTGCTCGCCGCCCTGATGACCTCGTGCTTCATCGCC GCCTATACCCTGTCAGACGGCTTGGGCGGCCGCGCCGCCGGCTCGGCCCATGCCTATGCCCTGTGGCTTTTCGCCCTTGA TGGCGTGCTTGCCCTGTTGGTCACCGTGGTCTTGCGCGGGCGGGCGATCTTCAAGGGCATGGCCCGCGCCCTGCCCGCCG GCATCGGCGGCGGCGCCCTGTCGCTCGGCGCCTATTGGACGGTGATCTGGGCGATGAGCGTCGCGCCCCTTGGTCAAGTG GCGGCCTTGCGCGAAAGCAGCGTGCTGTTCGCCCTGCTGATCTCGGTGGTTTTCCTCGGCGAAAAGGCCAGTCGCTGGCG GCTGGGGGCGGCGGCGCTGATCGCCTGCGGCGCCGGGGTGATCCGGCTGGCCTGA
Upstream 100 bases:
>100_bases CAAGCCGGTGGAACACGGCGGTCCGCGCGGACCCGAGCCCACCCGCTATAACGATTGGGAACGCAACGGCCGCTGCAGCG ACTTCTAGGATCTTCCCACG
Downstream 100 bases:
>100_bases GGGGTTAGGGCTTGTAGTATCCCCGATACCAGTCAACGAAGCGGCGCACCCCTTCTTCGACGCCGATCTTGGGGGCATAG CCGGTATCGGCGGCCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; Permease Protein; DMT Family Permease
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MDPLVFALVLGAAAMHAGWNAVVKVGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPASWPFLALSGCLHMGYNVALIGAY RAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAALGIALLVGGVWLMSIRGGAVGRSGGLPERRALLAALMTSCFIA AYTLSDGLGGRAAGSAHAYALWLFALDGVLALLVTVVLRGRAIFKGMARALPAGIGGGALSLGAYWTVIWAMSVAPLGQV AALRESSVLFALLISVVFLGEKASRWRLGAAALIACGAGVIRLA
Sequences:
>Translated_284_residues MDPLVFALVLGAAAMHAGWNAVVKVGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPASWPFLALSGCLHMGYNVALIGAY RAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAALGIALLVGGVWLMSIRGGAVGRSGGLPERRALLAALMTSCFIA AYTLSDGLGGRAAGSAHAYALWLFALDGVLALLVTVVLRGRAIFKGMARALPAGIGGGALSLGAYWTVIWAMSVAPLGQV AALRESSVLFALLISVVFLGEKASRWRLGAAALIACGAGVIRLA >Mature_284_residues MDPLVFALVLGAAAMHAGWNAVVKVGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPASWPFLALSGCLHMGYNVALIGAY RAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAALGIALLVGGVWLMSIRGGAVGRSGGLPERRALLAALMTSCFIA AYTLSDGLGGRAAGSAHAYALWLFALDGVLALLVTVVLRGRAIFKGMARALPAGIGGGALSLGAYWTVIWAMSVAPLGQV AALRESSVLFALLISVVFLGEKASRWRLGAAALIACGAGVIRLA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28907; Mature: 28907
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLVFALVLGAAAMHAGWNAVVKVGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPASWP CCHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH FLALSGCLHMGYNVALIGAYRAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAALGI HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH ALLVGGVWLMSIRGGAVGRSGGLPERRALLAALMTSCFIAAYTLSDGLGGRAAGSAHAYA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LWLFALDGVLALLVTVVLRGRAIFKGMARALPAGIGGGALSLGAYWTVIWAMSVAPLGQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH AALRESSVLFALLISVVFLGEKASRWRLGAAALIACGAGVIRLA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MDPLVFALVLGAAAMHAGWNAVVKVGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPASWP CCHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH FLALSGCLHMGYNVALIGAYRAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAALGI HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH ALLVGGVWLMSIRGGAVGRSGGLPERRALLAALMTSCFIAAYTLSDGLGGRAAGSAHAYA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LWLFALDGVLALLVTVVLRGRAIFKGMARALPAGIGGGALSLGAYWTVIWAMSVAPLGQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH AALRESSVLFALLISVVFLGEKASRWRLGAAALIACGAGVIRLA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA