| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is acsA [H]
Identifier: 83594904
GI number: 83594904
Start: 4118508
End: 4120448
Strand: Direct
Name: acsA [H]
Synonym: Rru_A3575
Alternate gene names: 83594904
Gene position: 4118508-4120448 (Clockwise)
Preceding gene: 83594903
Following gene: 83594905
Centisome position: 94.62
GC content: 63.68
Gene sequence:
>1941_bases ATGTCTGAGTCCGTTCTGGTTCCGGTGCCCGAAGCCATCGCCAAAGCCGCCTTGGTCAACGAGGCGCAATACCTTGATCT TTACAAGTCCTCCATCGCCGACCCCGACGCCTTTTGGGCCGAGCATGGCAAGCGCATCGACTGGATCAAACCCTTTACCG CGGTGAAGGATGTTTCCTTTGATCCCCACGACGTGCATATCCGCTGGTTCCACGACGGCACGCTCAACGTGTCGGTCAAC TGCCTGGACCGTCACCTGGAAACCCGGGGCGACCAGACCGCCATCCTGTGGGAGGGCGACGACCCCAAGGACGACGCCCG CATCACCTACCGCGATCTTTACGAGCGGGTGTGCAAGCTGGCCAACGCCTTCCGCGAGTTGGGCGTCAAAAAGGGCGACC GCGTCTGCATTTATCTGCCGATGATCCCCGAGGCGGCGGTGGCGATGCTGGCCTGCGCCCGCATCGGCGCCGTTCATTCC ATCGTGTTCGGCGGTTTCTCGCCCGATAGCCTGGCCAATCGCATCCAGGATTCCGAATGCACCCTGGTCATCACCTCCGA CGAGGGTCTGCGCGGCGGCCGCAAGGTGGCGCTGAAAAAGAACGTCGACACCGCCTTGGAGCATTGCCCGAGCGTCAAGA CGGTGGTGGTGGTCAAGCGCACCGGCGGCGCCATTGACACCGTCGAAGGCCGCGATGTCTGGTACCACGAGATCACCGCC AACCAGCCCGCCGAATGCCAGCCCGAGGAAATGAACGCCGAGGATCCGCTGTTCATCCTGTACACCTCGGGCTCGACCGG CAAGCCCAAGGGCGTGCTGCATACCTCAGGCGGCTATCTGGTCTATGTGTCGATGACCCATGAATACGTCTTCGACTACA AGGACGGCGAGGTTTACTGGTGCACGGCCGATGTCGGCTGGGTGACCGGCCACAGCTATATCGTTTACGGGCCGCTGGCC AATGGCGCCATCAGCCTGATGTTCGAAGGCGTGCCCAATTATCCCGACGTGTCGCGTTTCTGGCAGGTGGTGGAAAAGCA CAAGGTCAACATCTTCTACACCGCCCCCACCGCCATCCGCGCCCTGATGCGCGAGGGCGAGGAGCCGGTGAAGAAGCATG ACCGCTCGTCGCTGCGCATCCTTGGCTCGGTCGGCGAACCGATCAATCCCGAGGCCTGGACCTGGTACCACCGGGTGGTG GGCGAGGATCGGTGCCCGATCGTCGATACTTGGTGGCAGACCGAAACCGGCGGCATCCTGATCACGCCGCTGCCCGGGGC GACCAAGCTCAAGCCCGGATCGGCCACCTTGCCGTTCTTCGGGGTCGAGCCGGTGCTGGTCGATGCCGAGGGCAACGAAC TGAGCGGGGCGACCGAGGGCAATCTGTGCATCGCCCGCTCGTGGCCGGGGCAGATGCGCACGGTCTATGGCGATCACGAG CGCTTCGTGCAGACCTATTTCTCCACCTACAAGGGCTATTACTTCACCGGCGACGGCTGCCGCCGCGACGAGGACGGCTA TTACTGGATCACCGGCCGCGTCGATGACGTCATCAACGTGTCGGGCCACCGCATGGGAACGGCCGAGATCGAATCGGCCC TGGTCGCCCATCCCAAGGTGGCCGAAGCCGCCGTCGTCGGCTTCCCCCACGACATCAAGGGCCAAGGCATCTACGCCTAT GTCACCCTGGTGGCCGGCGAGAAGGAAACCGACGCCCTGCGCAAGGAACTGGTGGCCTGGGTCCGCAAGGACATCGGACC GATCGCCAGCCCCGATATCATCCAGTGGGCGCCCGGCCTGCCCAAGACGCGCTCGGGCAAGATCATGCGCCGCATCCTGC GCAAGATCGCCGAGAACGAATTCGGCGCCCTTGGCGATACCTCGACCCTGGCCGATCCGACGGTGGTGGAAGACCTGATC GCCAATCGTCCCCAGGCGTAA
Upstream 100 bases:
>100_bases CGAAATCCCATGACAGCGAAGGCCGGTTGCTTTTAGAGTTACGCCAACGATCAATTCCGCTGAAAGCGGAAACATTAGTG AAAAAAAGGGGAGAGAGTAC
Downstream 100 bases:
>100_bases AACGCGGCGGGCGAAGACCCAAGCAGGCGAGGGGCCGGGCGGCAACGTCCGGCCCTTTTCGCTGACGGCTTTCCACAGCC CCCCCCTTGGCTTATACATC
Product: acetyl-coenzyme A synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MSESVLVPVPEAIAKAALVNEAQYLDLYKSSIADPDAFWAEHGKRIDWIKPFTAVKDVSFDPHDVHIRWFHDGTLNVSVN CLDRHLETRGDQTAILWEGDDPKDDARITYRDLYERVCKLANAFRELGVKKGDRVCIYLPMIPEAAVAMLACARIGAVHS IVFGGFSPDSLANRIQDSECTLVITSDEGLRGGRKVALKKNVDTALEHCPSVKTVVVVKRTGGAIDTVEGRDVWYHEITA NQPAECQPEEMNAEDPLFILYTSGSTGKPKGVLHTSGGYLVYVSMTHEYVFDYKDGEVYWCTADVGWVTGHSYIVYGPLA NGAISLMFEGVPNYPDVSRFWQVVEKHKVNIFYTAPTAIRALMREGEEPVKKHDRSSLRILGSVGEPINPEAWTWYHRVV GEDRCPIVDTWWQTETGGILITPLPGATKLKPGSATLPFFGVEPVLVDAEGNELSGATEGNLCIARSWPGQMRTVYGDHE RFVQTYFSTYKGYYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGFPHDIKGQGIYAY VTLVAGEKETDALRKELVAWVRKDIGPIASPDIIQWAPGLPKTRSGKIMRRILRKIAENEFGALGDTSTLADPTVVEDLI ANRPQA
Sequences:
>Translated_646_residues MSESVLVPVPEAIAKAALVNEAQYLDLYKSSIADPDAFWAEHGKRIDWIKPFTAVKDVSFDPHDVHIRWFHDGTLNVSVN CLDRHLETRGDQTAILWEGDDPKDDARITYRDLYERVCKLANAFRELGVKKGDRVCIYLPMIPEAAVAMLACARIGAVHS IVFGGFSPDSLANRIQDSECTLVITSDEGLRGGRKVALKKNVDTALEHCPSVKTVVVVKRTGGAIDTVEGRDVWYHEITA NQPAECQPEEMNAEDPLFILYTSGSTGKPKGVLHTSGGYLVYVSMTHEYVFDYKDGEVYWCTADVGWVTGHSYIVYGPLA NGAISLMFEGVPNYPDVSRFWQVVEKHKVNIFYTAPTAIRALMREGEEPVKKHDRSSLRILGSVGEPINPEAWTWYHRVV GEDRCPIVDTWWQTETGGILITPLPGATKLKPGSATLPFFGVEPVLVDAEGNELSGATEGNLCIARSWPGQMRTVYGDHE RFVQTYFSTYKGYYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGFPHDIKGQGIYAY VTLVAGEKETDALRKELVAWVRKDIGPIASPDIIQWAPGLPKTRSGKIMRRILRKIAENEFGALGDTSTLADPTVVEDLI ANRPQA >Mature_645_residues SESVLVPVPEAIAKAALVNEAQYLDLYKSSIADPDAFWAEHGKRIDWIKPFTAVKDVSFDPHDVHIRWFHDGTLNVSVNC LDRHLETRGDQTAILWEGDDPKDDARITYRDLYERVCKLANAFRELGVKKGDRVCIYLPMIPEAAVAMLACARIGAVHSI VFGGFSPDSLANRIQDSECTLVITSDEGLRGGRKVALKKNVDTALEHCPSVKTVVVVKRTGGAIDTVEGRDVWYHEITAN QPAECQPEEMNAEDPLFILYTSGSTGKPKGVLHTSGGYLVYVSMTHEYVFDYKDGEVYWCTADVGWVTGHSYIVYGPLAN GAISLMFEGVPNYPDVSRFWQVVEKHKVNIFYTAPTAIRALMREGEEPVKKHDRSSLRILGSVGEPINPEAWTWYHRVVG EDRCPIVDTWWQTETGGILITPLPGATKLKPGSATLPFFGVEPVLVDAEGNELSGATEGNLCIARSWPGQMRTVYGDHER FVQTYFSTYKGYYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEIESALVAHPKVAEAAVVGFPHDIKGQGIYAYV TLVAGEKETDALRKELVAWVRKDIGPIASPDIIQWAPGLPKTRSGKIMRRILRKIAENEFGALGDTSTLADPTVVEDLIA NRPQA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=667, Percent_Identity=55.0224887556222, Blast_Score=737, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=680, Percent_Identity=53.9705882352941, Blast_Score=733, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=623, Percent_Identity=52.4879614767255, Blast_Score=685, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=635, Percent_Identity=37.007874015748, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI42544132, Length=543, Percent_Identity=30.0184162062615, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI38505220, Length=517, Percent_Identity=31.5280464216634, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI122937307, Length=551, Percent_Identity=27.9491833030853, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI115511026, Length=539, Percent_Identity=29.1280148423006, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI31982927, Length=639, Percent_Identity=25.1956181533646, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI58082049, Length=563, Percent_Identity=26.8206039076377, Blast_Score=176, Evalue=9e-44, Organism=Homo sapiens, GI157311624, Length=563, Percent_Identity=26.2877442273535, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI157311622, Length=563, Percent_Identity=26.2877442273535, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI187761345, Length=566, Percent_Identity=27.208480565371, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI187761343, Length=566, Percent_Identity=27.208480565371, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI195947378, Length=441, Percent_Identity=26.7573696145125, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI42544134, Length=348, Percent_Identity=26.1494252873563, Blast_Score=109, Evalue=1e-23, Organism=Homo sapiens, GI156151445, Length=551, Percent_Identity=23.956442831216, Blast_Score=90, Evalue=7e-18, Organism=Escherichia coli, GI1790505, Length=645, Percent_Identity=66.9767441860465, Blast_Score=914, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=636, Percent_Identity=38.9937106918239, Blast_Score=429, Evalue=1e-121, Organism=Escherichia coli, GI1788107, Length=562, Percent_Identity=24.3772241992883, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI221142682, Length=528, Percent_Identity=23.8636363636364, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI145693145, Length=510, Percent_Identity=24.9019607843137, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI1786810, Length=523, Percent_Identity=23.1357552581262, Blast_Score=102, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71982997, Length=660, Percent_Identity=50.1515151515151, Blast_Score=645, Evalue=0.0, Organism=Caenorhabditis elegans, GI71983001, Length=656, Percent_Identity=50.3048780487805, Blast_Score=644, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=650, Percent_Identity=21.6923076923077, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17538037, Length=527, Percent_Identity=24.6679316888046, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17557194, Length=540, Percent_Identity=25.1851851851852, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI32563687, Length=524, Percent_Identity=23.6641221374046, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17558820, Length=519, Percent_Identity=24.2774566473988, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560308, Length=561, Percent_Identity=24.4206773618538, Blast_Score=82, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6323182, Length=644, Percent_Identity=49.2236024844721, Blast_Score=634, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=635, Percent_Identity=47.7165354330709, Blast_Score=596, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6319699, Length=540, Percent_Identity=25.5555555555556, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24667955, Length=663, Percent_Identity=54.2986425339367, Blast_Score=717, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=563, Percent_Identity=59.3250444049734, Blast_Score=672, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=521, Percent_Identity=59.8848368522073, Blast_Score=627, Evalue=1e-180, Organism=Drosophila melanogaster, GI21355225, Length=616, Percent_Identity=37.6623376623377, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI21355181, Length=547, Percent_Identity=24.1316270566728, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI18859661, Length=515, Percent_Identity=25.2427184466019, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24581924, Length=523, Percent_Identity=22.3709369024857, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI24656500, Length=527, Percent_Identity=22.5806451612903, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI21356947, Length=368, Percent_Identity=24.4565217391304, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71569; Mature: 71438
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESVLVPVPEAIAKAALVNEAQYLDLYKSSIADPDAFWAEHGKRIDWIKPFTAVKDVSF CCCCEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCEECEECCCHHHHCCCC DPHDVHIRWFHDGTLNVSVNCLDRHLETRGDQTAILWEGDDPKDDARITYRDLYERVCKL CCCEEEEEEEECCEEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHH ANAFRELGVKKGDRVCIYLPMIPEAAVAMLACARIGAVHSIVFGGFSPDSLANRIQDSEC HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCE TLVITSDEGLRGGRKVALKKNVDTALEHCPSVKTVVVVKRTGGAIDTVEGRDVWYHEITA EEEEECCCCCCCCEEEEEECCHHHHHHHCCCCEEEEEEEECCCCEECCCCCEEEEEEECC NQPAECQPEEMNAEDPLFILYTSGSTGKPKGVLHTSGGYLVYVSMTHEYVFDYKDGEVYW CCCCCCCCHHCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCEEEE CTADVGWVTGHSYIVYGPLANGAISLMFEGVPNYPDVSRFWQVVEKHKVNIFYTAPTAIR EECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECHHHHH ALMREGEEPVKKHDRSSLRILGSVGEPINPEAWTWYHRVVGEDRCPIVDTWWQTETGGIL HHHHCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEE ITPLPGATKLKPGSATLPFFGVEPVLVDAEGNELSGATEGNLCIARSWPGQMRTVYGDHE EECCCCCCEECCCCCCCCEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCHH RFVQTYFSTYKGYYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEIESALVAHPKV HHHHHHHHHHCCEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCH AEAAVVGFPHDIKGQGIYAYVTLVAGEKETDALRKELVAWVRKDIGPIASPDIIQWAPGL HCEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCC PKTRSGKIMRRILRKIAENEFGALGDTSTLADPTVVEDLIANRPQA CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SESVLVPVPEAIAKAALVNEAQYLDLYKSSIADPDAFWAEHGKRIDWIKPFTAVKDVSF CCCEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCEECEECCCHHHHCCCC DPHDVHIRWFHDGTLNVSVNCLDRHLETRGDQTAILWEGDDPKDDARITYRDLYERVCKL CCCEEEEEEEECCEEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHH ANAFRELGVKKGDRVCIYLPMIPEAAVAMLACARIGAVHSIVFGGFSPDSLANRIQDSEC HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCCCE TLVITSDEGLRGGRKVALKKNVDTALEHCPSVKTVVVVKRTGGAIDTVEGRDVWYHEITA EEEEECCCCCCCCEEEEEECCHHHHHHHCCCCEEEEEEEECCCCEECCCCCEEEEEEECC NQPAECQPEEMNAEDPLFILYTSGSTGKPKGVLHTSGGYLVYVSMTHEYVFDYKDGEVYW CCCCCCCCHHCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCEEEE CTADVGWVTGHSYIVYGPLANGAISLMFEGVPNYPDVSRFWQVVEKHKVNIFYTAPTAIR EECCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECHHHHH ALMREGEEPVKKHDRSSLRILGSVGEPINPEAWTWYHRVVGEDRCPIVDTWWQTETGGIL HHHHCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEE ITPLPGATKLKPGSATLPFFGVEPVLVDAEGNELSGATEGNLCIARSWPGQMRTVYGDHE EECCCCCCEECCCCCCCCEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCHH RFVQTYFSTYKGYYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEIESALVAHPKV HHHHHHHHHHCCEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCH AEAAVVGFPHDIKGQGIYAYVTLVAGEKETDALRKELVAWVRKDIGPIASPDIIQWAPGL HCEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCC PKTRSGKIMRRILRKIAENEFGALGDTSTLADPTVVEDLIANRPQA CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA