| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is phoU [H]
Identifier: 83594873
GI number: 83594873
Start: 4080716
End: 4081486
Strand: Direct
Name: phoU [H]
Synonym: Rru_A3544
Alternate gene names: 83594873
Gene position: 4080716-4081486 (Clockwise)
Preceding gene: 83594872
Following gene: 83594874
Centisome position: 93.75
GC content: 64.72
Gene sequence:
>771_bases ATGAGAAAGACCCGTTGTCACTGCCCCGGATCAGCCCCCATGACCCCGACCCCCGATACCCATATCGTCAGTTCCTATGA CGAGGAATTGCGCAAGCTCGATGGCCGTATTCAGCAGATGGGCGGTCTGGCGATCGCCCAGACCCGCGATGCCATCGAAG TGATTCTCGGCCGCCACCCCGATGTCGCGGCGCGCATTTTCGTCCGCGAGGACGAGATGAACGGTCTGGAGCACCAGGTC AACGAACAGGTGGTCCGCCTGCTCGCCCTGCGTCAGCCGGTCGCCGACGACCTGCGCACGGTGATCACCGGCCTCAAGGT TTCGGGGATGCTTGAACGGGTCGGCGATTACGCCGCCAATGCCGCCAAGCGGGGGCTGACCCTGCAGGACGCGGCGCCGA TTCCGGTGCGCGGCCCGGTGTCGCGGATGGGCGATCTGGTGATCGCCATGCTCGACGACGCCCTCAAGGCCTTCCAGACC CGCGACGCCGACCTCGCCTGCCAGGTCCGCGACCGCGACGCCGAGGTCGACGAGCTGCATTCAAGCCTGTTTCGCGAATT GCTGACCTATATGCTGGAAGATCCGCGCAGCATTTCGGCCTGTTCGCAGTTGATGTTCGTCTCCAAGAACCTGGAACGGG TGGGCGATCAGGCGACCAATGTCGCCGAAGCCGCCTATTATCGCTCGACCGGGCGAATCCTGGCCGGCGAGCGTCCCAAA AGCGACACCACCACCCAGACCACCGAAGCCTCCCCCGGCCTTCCCCACTGA
Upstream 100 bases:
>100_bases TCTTCCTACCCCTGCATGGCCCGCGCCCGCCGCGGCGGGCGGCCCCTTCGGCTTAAGGGGGCGAGGCTGGCGTCTTTTGC GTCGCCCGCCGTTCGATGCT
Downstream 100 bases:
>100_bases TCGGGCCCACCCCGGTCGCTCCGGAGAGCCTAAGAACGGATAACCGAGACCTTGGAAACCATCACGGTCGTTCTGTTCTT GCTGTTTTGCGTGGTGGTCA
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRKTRCHCPGSAPMTPTPDTHIVSSYDEELRKLDGRIQQMGGLAIAQTRDAIEVILGRHPDVAARIFVREDEMNGLEHQV NEQVVRLLALRQPVADDLRTVITGLKVSGMLERVGDYAANAAKRGLTLQDAAPIPVRGPVSRMGDLVIAMLDDALKAFQT RDADLACQVRDRDAEVDELHSSLFRELLTYMLEDPRSISACSQLMFVSKNLERVGDQATNVAEAAYYRSTGRILAGERPK SDTTTQTTEASPGLPH
Sequences:
>Translated_256_residues MRKTRCHCPGSAPMTPTPDTHIVSSYDEELRKLDGRIQQMGGLAIAQTRDAIEVILGRHPDVAARIFVREDEMNGLEHQV NEQVVRLLALRQPVADDLRTVITGLKVSGMLERVGDYAANAAKRGLTLQDAAPIPVRGPVSRMGDLVIAMLDDALKAFQT RDADLACQVRDRDAEVDELHSSLFRELLTYMLEDPRSISACSQLMFVSKNLERVGDQATNVAEAAYYRSTGRILAGERPK SDTTTQTTEASPGLPH >Mature_256_residues MRKTRCHCPGSAPMTPTPDTHIVSSYDEELRKLDGRIQQMGGLAIAQTRDAIEVILGRHPDVAARIFVREDEMNGLEHQV NEQVVRLLALRQPVADDLRTVITGLKVSGMLERVGDYAANAAKRGLTLQDAAPIPVRGPVSRMGDLVIAMLDDALKAFQT RDADLACQVRDRDAEVDELHSSLFRELLTYMLEDPRSISACSQLMFVSKNLERVGDQATNVAEAAYYRSTGRILAGERPK SDTTTQTTEASPGLPH
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=214, Percent_Identity=32.2429906542056, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 28178; Mature: 28178
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTRCHCPGSAPMTPTPDTHIVSSYDEELRKLDGRIQQMGGLAIAQTRDAIEVILGRHP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC DVAARIFVREDEMNGLEHQVNEQVVRLLALRQPVADDLRTVITGLKVSGMLERVGDYAAN CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKRGLTLQDAAPIPVRGPVSRMGDLVIAMLDDALKAFQTRDADLACQVRDRDAEVDELH HHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH SSLFRELLTYMLEDPRSISACSQLMFVSKNLERVGDQATNVAEAAYYRSTGRILAGERPK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC SDTTTQTTEASPGLPH CCCCCCCCCCCCCCCC >Mature Secondary Structure MRKTRCHCPGSAPMTPTPDTHIVSSYDEELRKLDGRIQQMGGLAIAQTRDAIEVILGRHP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC DVAARIFVREDEMNGLEHQVNEQVVRLLALRQPVADDLRTVITGLKVSGMLERVGDYAAN CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKRGLTLQDAAPIPVRGPVSRMGDLVIAMLDDALKAFQTRDADLACQVRDRDAEVDELH HHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH SSLFRELLTYMLEDPRSISACSQLMFVSKNLERVGDQATNVAEAAYYRSTGRILAGERPK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC SDTTTQTTEASPGLPH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10629178 [H]