| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594863
Identifier: 83594863
GI number: 83594863
Start: 4065221
End: 4066174
Strand: Reverse
Name: 83594863
Synonym: Rru_A3534
Alternate gene names: NA
Gene position: 4066174-4065221 (Counterclockwise)
Preceding gene: 83594864
Following gene: 83594862
Centisome position: 93.41
GC content: 67.92
Gene sequence:
>954_bases ATGTCATCCACGACCTCATCGACCACGGGGATTTTCTTCGACCGCCTGATCGTCGGTGTCGATCGGCTGGTTACCGGCGG CCTTCTTCTCAAGATCGTCGTCGTGTTCGCTGTCGCCGCCGCCCTTTACTACCCGGTGGGCATGGCGATCACCCACCGCA TCAACGATGACTTGGCTTATCAACCCGCCCCGACCGAGGCGTCGCAAACGGTGGCGATGGCGGCCGGGCTGATCGACCGC GAGGTGGCGCGCACGCCCTGGGTTGCCGACAGCCCGTGGTTCTTCGCCACCTCCGCCCTTGATGACATGGCCAATTTCCA GCAAGGGGTGATCAGCGGTCTGCACGGGGTGGTCGGCGCCTTCGGTGGCGCCCTGGCCGGGAATGATGGCGATCTCACCG CGGCGGTCGGCGGTCTGGCCTATCCCGGCGATCGCTGGCGGGCCTTTTTCGAAACCACCCCGACCACCCAACCGCCGAGC GAAGAGGTCTATCTGGAGGCGCGCAAGGCCCTTCTTTCCTATGACCGGCGGGCGAGCGCCGGCGAGGCGGTTTTTGATCC GAGCGCCCCGGCCCTGGCCGCCTTCCTGGTCCAGATCAGGGCGGAGGTCGCCGCCACCCTTCTGGGTATCGATCGCCAGA TCGCCAGCGCCGGCGCCTTCAACCGCGCCAATGACGACGTCTATATGACCGCCAAGGGCCAAGCCTATGCCTGGGCGATG AGCCTTGCCGCCCTCGGCCGGGACGGCGCCGCCACCCTGGAGGCCGGCGCCGTCCCGGTGGCCTGGAGTCGCATGGTCGA GACCCTGAACAGGGTGGCGACCCTGCGGCCCTGGGTGGTGACCAACGGCGCGGCCGATGCCCTGATCGTGCCCAACCATT TGGCCAGCCAGGGCTTCTTGCTGGCGCGCGCCCAGGCCGACATCGACGCGGTGATCGCCGCCCTGGGTGGCTGA
Upstream 100 bases:
>100_bases CTGAGGCCTTGCGCCAACGCCCCCCGCTCTCCGGAACCGATGAAGTCTGGCCGACGTTGCTTCGCCAGACTTCATCGCTT CCAGCGGGGGCTTGCGCGTC
Downstream 100 bases:
>100_bases TCCCGCCTCGCGGTGGCGATCGGGCGATCGCGGCTCGCGGTGGGGACCCGGCAATCGCGGGCTTGCGATTTGGCGCGCGG CCCTGTTCACTGGGGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSSTTSSTTGIFFDRLIVGVDRLVTGGLLLKIVVVFAVAAALYYPVGMAITHRINDDLAYQPAPTEASQTVAMAAGLIDR EVARTPWVADSPWFFATSALDDMANFQQGVISGLHGVVGAFGGALAGNDGDLTAAVGGLAYPGDRWRAFFETTPTTQPPS EEVYLEARKALLSYDRRASAGEAVFDPSAPALAAFLVQIRAEVAATLLGIDRQIASAGAFNRANDDVYMTAKGQAYAWAM SLAALGRDGAATLEAGAVPVAWSRMVETLNRVATLRPWVVTNGAADALIVPNHLASQGFLLARAQADIDAVIAALGG
Sequences:
>Translated_317_residues MSSTTSSTTGIFFDRLIVGVDRLVTGGLLLKIVVVFAVAAALYYPVGMAITHRINDDLAYQPAPTEASQTVAMAAGLIDR EVARTPWVADSPWFFATSALDDMANFQQGVISGLHGVVGAFGGALAGNDGDLTAAVGGLAYPGDRWRAFFETTPTTQPPS EEVYLEARKALLSYDRRASAGEAVFDPSAPALAAFLVQIRAEVAATLLGIDRQIASAGAFNRANDDVYMTAKGQAYAWAM SLAALGRDGAATLEAGAVPVAWSRMVETLNRVATLRPWVVTNGAADALIVPNHLASQGFLLARAQADIDAVIAALGG >Mature_316_residues SSTTSSTTGIFFDRLIVGVDRLVTGGLLLKIVVVFAVAAALYYPVGMAITHRINDDLAYQPAPTEASQTVAMAAGLIDRE VARTPWVADSPWFFATSALDDMANFQQGVISGLHGVVGAFGGALAGNDGDLTAAVGGLAYPGDRWRAFFETTPTTQPPSE EVYLEARKALLSYDRRASAGEAVFDPSAPALAAFLVQIRAEVAATLLGIDRQIASAGAFNRANDDVYMTAKGQAYAWAMS LAALGRDGAATLEAGAVPVAWSRMVETLNRVATLRPWVVTNGAADALIVPNHLASQGFLLARAQADIDAVIAALGG
Specific function: Unknown
COG id: COG5345
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33118; Mature: 32987
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTTSSTTGIFFDRLIVGVDRLVTGGLLLKIVVVFAVAAALYYPVGMAITHRINDDLAY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC QPAPTEASQTVAMAAGLIDREVARTPWVADSPWFFATSALDDMANFQQGVISGLHGVVGA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH FGGALAGNDGDLTAAVGGLAYPGDRWRAFFETTPTTQPPSEEVYLEARKALLSYDRRASA HCCCCCCCCCCHHHHHCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC GEAVFDPSAPALAAFLVQIRAEVAATLLGIDRQIASAGAFNRANDDVYMTAKGQAYAWAM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH SLAALGRDGAATLEAGAVPVAWSRMVETLNRVATLRPWVVTNGAADALIVPNHLASQGFL HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHCCCCEE LARAQADIDAVIAALGG EEECHHHHHHHHHHHCC >Mature Secondary Structure SSTTSSTTGIFFDRLIVGVDRLVTGGLLLKIVVVFAVAAALYYPVGMAITHRINDDLAY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC QPAPTEASQTVAMAAGLIDREVARTPWVADSPWFFATSALDDMANFQQGVISGLHGVVGA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH FGGALAGNDGDLTAAVGGLAYPGDRWRAFFETTPTTQPPSEEVYLEARKALLSYDRRASA HCCCCCCCCCCHHHHHCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC GEAVFDPSAPALAAFLVQIRAEVAATLLGIDRQIASAGAFNRANDDVYMTAKGQAYAWAM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH SLAALGRDGAATLEAGAVPVAWSRMVETLNRVATLRPWVVTNGAADALIVPNHLASQGFL HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHCCCCEE LARAQADIDAVIAALGG EEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA